Sinocyclocheilus grahami (golden-line barbel): 107592329
Help
Entry
107592329 CDS
T04918
Name
(RefSeq) general transcription factor IIH subunit 2-like
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03022
Basal transcription factors
sgh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107592329
09124 Replication and repair
03420 Nucleotide excision repair
107592329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgh03021
]
107592329
03400 DNA repair and recombination proteins [BR:
sgh03400
]
107592329
Transcription machinery [BR:
sgh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
107592329
DNA repair and recombination proteins [BR:
sgh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
107592329
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
Zn_ribbon_GTF2H2
VWA
Zn_ribbon_11
HscB_4_cys
Motif
Other DBs
NCBI-GeneID:
107592329
NCBI-ProteinID:
XP_016137303
UniProt:
A0A672RLA9
LinkDB
All DBs
Position
Unknown
AA seq
392 aa
AA seq
DB search
MDEEPERAKRWEGGYERTWEVLKEDESGSLKASVEDILFQAKRKRVSEGHGQVRLGMMRH
LFVIIDSSRSMEDQDLRPNRLTSTLKLMEFFVEEYFDQNPISQIGIITTKNKRAEKLTDL
AGNPKKHLAALKKAVDSTCVGEPSLYNSLNVAMQTLKHMPAHTSKEILVIFSSLTTCDPA
NIYELIKTLNALKIRVSVIGLSAEVRVCTILTRETGGSYNVILDESHFKELLMLHVKPPP
ASSSSECSLIRMGFPQHVIASMSDQDAKPSFSMSHLDSTGEPGLTLGGYYCPQCRAKYTE
LPVECKVCGLTLVSAPHLARSFHHLFPLEAFQETPLEEYEGERFCEACQGELKDKSVFTC
LACKKVFCVECDLFIHDTLHCCPGCMQTDRTS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaaccagagagagcaaaacgctgggaaggaggatacgaacgaacatgggag
gtgctgaaggaggatgaatcgggatctcttaaagcttctgtggaggacattcttttccaa
gcaaagaggaaaagagtgtctgagggtcatggacaagttcggcttgggatgatgcggcat
ctctttgtgatcattgactcatctagatcaatggaagatcaggacctgaggcccaatagg
ctgacctcaaccttaaagctgatggagttttttgtggaggaatactttgaccagaatcca
atcagtcagatagggatcattaccaccaagaacaagagggcggagaagctcactgatctt
gcagggaaccctaagaagcatttagcagctctgaagaaagctgtggactccacatgtgtt
ggtgaaccgtctctctacaactctctcaacgtggctatgcagactctcaaacacatgcct
gctcatacaagcaaagagatcctcgttattttcagcagtcttactacctgtgacccagcc
aacatctatgagcttatcaaaactctgaatgctttgaagattagagtgtctgtgataggc
ctgtcagcagaagttcgagtgtgcaccattctcacaagagaaactggaggatcctacaat
gtaatattggatgagagtcattttaaagagctgctgatgctgcatgtgaagccgcctcct
gccagctcctcctcagagtgctccctcattcgcatgggtttccctcagcatgtcatagcc
tccatgtctgatcaggatgccaaaccctcgttcagcatgtcgcacctagacagcactggt
gagccaggactcactcttggtggctactactgcccacagtgtagagccaaatacaccgag
ctgccagtggagtgtaaagtgtgtggtctgactttagtttccgctcctcacctggcccgt
tccttccatcacctcttccccctggaggccttccaggaaaccccactggaggagtatgag
ggggagaggttctgtgaggcctgccaaggagagttgaaagacaaaagtgtatttacttgc
ctagcatgtaaaaaagtgttctgcgtggagtgtgatctcttcatacatgacacactgcac
tgctgtcctggctgtatgcagactgacaggacatcctga
DBGET
integrated database retrieval system
