Sinocyclocheilus grahami (golden-line barbel): 107592643
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Entry
107592643 CDS
T04918
Name
(RefSeq) thrombospondin-3a
KO
K04659
thrombospondin 2/3/4/5
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04145
Phagosome
sgh04510
Focal adhesion
sgh04512
ECM-receptor interaction
sgh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107592643
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107592643
09144 Cellular community - eukaryotes
04510 Focal adhesion
107592643
09142 Cell motility
04820 Cytoskeleton in muscle cells
107592643
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sgh04131
]
107592643
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sgh04147
]
107592643
00536 Glycosaminoglycan binding proteins [BR:
sgh00536
]
107592643
Membrane trafficking [BR:
sgh04131
]
Endocytosis
Phagocytosis
Opsonins
107592643
Exosome [BR:
sgh04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107592643
Exosomal proteins of colorectal cancer cells
107592643
Exosomal proteins of bladder cancer cells
107592643
Glycosaminoglycan binding proteins [BR:
sgh00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107592643
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
COMP
EGF_MSP1_1
EGF_3
cEGF
EGF
Motif
Other DBs
NCBI-GeneID:
107592643
NCBI-ProteinID:
XP_016137670
LinkDB
All DBs
Position
Unknown
AA seq
934 aa
AA seq
DB search
MGSQVCSSGKISCFNASPTNLFWIFSLSLLRVLFVNMKVWVSLFVFTFVWLAACAQKQDV
PVIDVLSLEDVKQTVAAVEKISLALKTLSDVYVMSSFRLPPKLGGVLLGLYNKQDNKKYL
EVAIMSKINKILVRYVREDGKLHTVNLQSPNLADGQSQSVILRVGGLRREYLSLELYVNC
RLADSAQRLPLLVSLPRDAELVEIRNGHKAYTRMQILGELREDIREQVKEMSLIRNAILE
CQMCGFHEPHSLCQPNPCFKGVACMETFDFPGYRCGPCPEGMTGNGTHCQDIDECAEAQP
CYTPGACVNTAKGFTCEPCPPGLWGPPLSGFGVEYAKSQRQECSDIDECLDLASACTPNS
ICINTIGSYQCGQCKFGYVGNQTTGCFPRKSCAMLSFNPCDTNAYCVIQRNGDVTCACNV
GWAGNGHTCGKDTDIDGYPDRSLPCMDNDKHCKQDNCIFTPNSGQEDADNDGIGDQCDED
ADGDGIKNVEDNCRLVSNKDQQNSDTDSFGDACDNCPTVPNIDQKDTDNNGEGDACDDDI
DGDGIQNVLDNCPKVPNPMQTDRDRDGVGDACDSCPEISNPMQTDVDNDLVGDVCDTNQD
TDGDGHQDTRDNCPDIPNSSQLDSDNDGIGDDCDDDDDNDGVPDNHAINGIGPDNCRLIS
NPNQKDSDSNGVGDVCENDFDNDAVMDSIDVCPESAEVTLTDFRAYQTVILDPEGDAQID
PNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNTVTDDDYAGFIFGYQDSSS
FYVVMWKQTEQTYWQSIPFRAMAEPGLQLKAVKSRTGPSEFLRNALWHTGDTDGEVKLLW
KDPRNVGWQDKTSYRWQLSHRPQVGYIRVKLYEGTEMVADSNVVIDTTMRGGRLGVFCFS
QENIIWSNLRYRCNDTVPQDFSTHRKQVLMHIKV
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgggatcgcaggtttgttccagtggaaaaatttcgtgtttcaatgcatcgccgacgaat
ctgttctggatattttctttatcacttctgcgtgtattatttgtaaacatgaaagtttgg
gtcagtctcttcgtgtttacgttcgtctggctcgcagcgtgcgcacagaaacaagacgta
ccggtgatagacgtgttgagtttggaggatgtgaagcagaccgtggctgcggtggagaag
atctcattagctctgaagactctcagtgatgtgtatgtgatgtcttccttccgtctgcct
cctaaactgggtggagtcctgctgggtctctacaacaagcaggataacaagaaatacctg
gaggttgccatcatgagcaagattaacaaaattctggtccggtatgttcgtgaagatggg
aagctgcacacagtcaatctgcagagcccaaatctagcagacggacagtctcagtctgtt
atactccgtgtcggtggcttgcgcagagagtacctgagcctcgaactctatgtgaactgt
cgtctggctgactctgcccagcggctgcccctattagtctctctgcccagagatgcagag
ctggtggagattcgtaatggccacaaggcatacactcggatgcagatcttgggagagctg
agagaggacatcagagaacaggtgaaagaaatgtctctcatcaggaatgctattctggag
tgccagatgtgtggatttcatgagccgcattcactctgtcagcccaacccctgctttaag
ggcgtggcctgcatggagacgtttgatttcccagggtaccgctgtggcccctgtccagag
ggcatgacagggaacggcacacactgtcaggatatagatgagtgtgcagaggctcagccg
tgttacacaccaggcgcatgtgtcaacacagcaaaagggtttacctgtgagccctgccca
cctggactgtggggtcctcctctctctggattcggtgtggaatatgctaagagtcaacgt
caggaatgctctgatattgatgaatgtcttgatttggccagtgcctgcacacccaactcc
atctgcatcaacaccattggatcatatcaatgcggtcagtgcaagtttggatatgttggg
aatcagacaactggatgtttccctcggaaatcgtgcgctatgctcagtttcaacccctgt
gacactaacgcttactgcgtcattcagcggaacggcgacgtcacctgcgcttgtaatgtc
ggatgggccggtaatggtcacacatgtgggaaggacacggatattgatggttatccggat
cgctccttgccatgcatggacaatgacaagcactgcaaacaggacaactgcatcttcacg
cccaactccggtcaggaagatgcagataatgatgggattggagaccagtgtgatgaggat
gcagatggagacggaataaaaaatgtagaggataactgtcggttggtttccaataaagat
cagcagaactctgacactgattcatttggtgacgcatgtgataactgtcccaccgttccc
aacattgaccagaaagacactgacaataacggagagggagatgcatgcgatgatgacatc
gatggagatggaatccagaacgtgctggataactgtcccaaagtgccaaacccaatgcag
acagaccgagacagagacggagtgggtgatgcatgtgacagctgtcctgagatcagcaac
cccatgcagacagatgtagacaatgacttagtcggggatgtttgcgacaccaatcaagac
acggatggagacggacaccaggacactcgagataactgtcccgacattccaaacagctct
cagctcgactcggacaatgacggcatcggagatgactgtgatgatgacgacgataatgat
ggggtcccagacaatcacgccatcaacggcatcggacccgataactgcagactcatttcc
aaccccaaccagaaagactcagacagtaacggagtcggtgacgtatgtgagaatgacttt
gacaatgatgcggtgatggattcgattgacgtgtgtccagaaagtgctgaagtcacactt
acagatttcagagcctatcagacagtcattctggacccagagggtgacgctcagatcgac
ccgaactgggtggtgctcaatcagggtatggagattgttcaaaccatgaacagtgacccg
ggcttggcagtgggttacacagcgtttaacggtgtggacttcgagggaacatttcacgtt
aacaccgtgactgacgacgactacgccggcttcatctttggctatcaggattcatctagt
ttctatgtggtgatgtggaagcagaccgaacagacatactggcagtcgatacccttcagg
gccatggctgaaccaggcctgcagctcaaggcggtgaagtctcgtactggccccagtgag
tttcttcgtaatgctctgtggcacacgggggatacggatggagaggtgaaactgctctgg
aaagacccacgaaatgtcggctggcaagataaaacctcgtaccggtggcagctcagccat
cggccacaggtcggctacatcagggtgaagctgtatgaaggcacagagatggtggctgac
tccaatgttgtgattgacaccactatgagagggggacgcctgggcgtgttctgcttctct
caagagaacatcatttggtccaatctgcgctaccgctgtaacgatactgttccacaggac
ttcagtacacaccgtaaacaggttctaatgcacataaaggtgtga
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integrated database retrieval system
