Sinocyclocheilus grahami (golden-line barbel): 107592651
Help
Entry
107592651 CDS
T04918
Name
(RefSeq) neuronal PAS domain-containing protein 1-like
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgh03000
]
107592651
Transcription factors [BR:
sgh03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
107592651
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_4
PAS_9
HLH
Motif
Other DBs
NCBI-GeneID:
107592651
NCBI-ProteinID:
XP_016137675
LinkDB
All DBs
Position
Unknown
AA seq
770 aa
AA seq
DB search
MMAAMPFVSEGKCVSMEWDFLHGLLAKPPTLPCLQNLRKEKSRNAARSRRGKENFEFFEL
AKMLPLPGAITSQLDKASIIRLTISYLHMRHFASQGDPPWSPLREGENNCNKVRRTSHSL
VTDIFEQHLGAHLLQSLDGFVFVVSQEGRFLYISETVSIYLGLSQVELTGSSVFDYIHPA
DHVEMAERLGIRPHLRAEAGCQTCHESASSSASTSSLAGTPEPAPSSPCSPVSELSERGF
VIRMKSTLTKRGLHVKSSGYKVIHVTGRIRCRPALVPGSSRPLHRPMGLVALAHTLPPSM
LNEVRMESHMFVFRVNMDLQVTYCENRISEYMDLSPAEVVGHTCYHFIHAEDLDTIRQSH
ADLLRKGQVVTGYYRWLQRRGGYLWIQSCATVSINHKAPHERNVIWVNYVLSRSELADMP
LDLLQLPESLRAERLQASSSPRDTSPKAQGSTGTQSLKGRTETDHKGKEAFSHTAASQSE
STRKRSHQSDAESVPREARRRMEVFRQREDSPCTSSDQASDSEVEEDERESEWDHNLTSK
RVKREEGPLKQGNGANGAGKIHNGRAVIQHLKSVVTSSGSNIKTEQEVMGTSVGPGSGRR
WSQAQPSRGGTNGSSPPSHPQNSTPTEASSKALFNPPSPTLSPPIAASSLPRDDRSIHGG
CAPDFELLQRLTASGAAGRVFFHPLALGPQGPQSLYAPSTIRYAPPEMPTAHAEGHHSDH
VAKTPAFFPHLQRIASLPPFNGFSPVEPTFPPTLPFCMNGLRGAAGTDED
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggccatgccgttcgtcagcgagggaaagtgtgtgagcatggagtgggacttc
ctacatgggctcctcgccaaaccacccaccttaccctgcttgcagaacttgaggaaggag
aagtcgcgcaatgcagctcgttctcggcgaggtaaggagaactttgagttcttcgagctg
gcgaagatgcttccgctccccggggcaattaccagccagctggacaaggcctccatcatc
cgcctcaccatcagttacctgcacatgagacactttgccagccagggagacccaccctgg
agccctctacgggagggagagaacaactgcaacaaggtgcgaagaacaagtcactcgctg
gtcactgacatatttgaacagcacctgggagctcatctactacagtctctggatggattt
gtgtttgtggtcagtcaggaaggccgatttctgtatatctcagagactgtgtccatctac
cttggcctttcacaggttgagttgactggcagtagcgtgtttgattacatccaccctgcg
gatcatgttgagatggcggagcgtcttggcattaggccacacctccgggcagaggcaggc
tgtcaaacgtgccatgagagcgcttcaagctccgcctccacatcctcactggccggcact
ccagaaccagcaccatctagtccctgttctccagtcagtgagttatcagaacgtggcttt
gtcatcaggatgaaatccaccctcaccaagcgtggcctccacgttaaatcctcgggctat
aaagtgattcatgtgacaggtcggattcggtgtcggccagctctggtgccaggctcctcc
cgccccttgcatcgaccaatgggattggtcgctctggctcacacgcttccgccctccatg
ctcaatgaggtgcgcatggaaagtcacatgtttgtcttcagagtcaacatggacctgcag
gtcacctactgtgagaacaggatttcggagtatatggacctgagcccagctgaggtggtt
ggacatacctgctaccatttcatccatgcagaagacctggacaccatcaggcagagccat
gcagacttgctgcggaaagggcaggttgtgacggggtactatcgctggctgcagaggaga
ggaggctatctctggattcagtcctgtgccaccgtgtccattaaccacaaagcgccccat
gagcgtaacgtcatctgggtcaactatgtgctcagtcgatcagagctggcagacatgcct
ctggacttattacaactcccagaaagcctgagggcagagcggcttcaagcaagctcatcc
ccacgcgacacctctccaaaggcacaaggctccacagggacacagtcattgaaaggcagg
actgagacagaccacaaggggaaggaagccttctcgcacactgctgccagccaatcagag
agcaccaggaagagatcgcaccagtctgatgctgaaagcgttcctcgtgaggcaaggagg
cggatggaggtattccggcagagagaggacagcccatgtacctcctcagaccaagccagc
gacagcgaggtggaagaggatgagagggagagcgagtgggaccacaacctcaccagcaaa
cgggtgaagagagaagaggggccattgaaacaaggcaatggggccaatggagcaggtaaa
atccacaacggccgtgcagtgatccagcatcttaagagtgtggtgaccagttccgggtcg
aatattaagactgaacaagaagtgatgggaacaagtgtaggcccaggttctgggaggcgc
tggagccaagctcagcccagcagaggaggaaccaatggcagcagtccaccttcccatcct
caaaattccaccccaacagaagcttcatccaaggctctgttcaaccccccctccccaacc
ctgtcgccacccatcgctgcctcgtccttgcccagggatgatcggtctatccacggaggg
tgtgctccggactttgaactactgcagagactgactgcaagcggggctgcaggacgtgtt
ttctttcaccctctggctcttggcccacaggggccccagagtctctatgctcccagcact
attcgctacgccccacctgagatgcctacagctcatgctgaagggcaccactcagaccat
gtggccaaaactcccgctttctttccccacttgcaaaggatcgcatctctgcctcccttt
aatggtttttctccagttgaacccacttttcctccaactttgcccttctgtatgaacgga
ctgaggggggcagcagggacagatgaggattga
DBGET
integrated database retrieval system
