Sinocyclocheilus grahami (golden-line barbel): 107592968
Help
Entry
107592968 CDS
T04918
Name
(RefSeq) nuclear pore complex protein Nup153-like
KO
K14296
nuclear pore complex protein Nup153
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03013
Nucleocytoplasmic transport
sgh03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107592968
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
107592968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgh03019
]
107592968
Messenger RNA biogenesis [BR:
sgh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107592968
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
107592968
NCBI-ProteinID:
XP_016138041
LinkDB
All DBs
Position
Unknown
AA seq
1387 aa
AA seq
DB search
METFQRVIQVQSGWTGTTWLLPLMAVTKLPRSQMDETLQSRAQVTQQPGLISRVTDTVKS
IVPSWLQKYFKNGDVPEGDTGAVGVDRNNVAPPPNGSDEVTPLPDGRDSPEPSTSNTEPS
TSRASLNFQEALSRPPLNRTHLHFPSLDGSPALGGTSSLFSQPSTSTAPFSGSPFAVTSN
FSLVKEIKDSSSQHEDDNISTTSGFSSRASDKDVPISKTMPLLWSPETERTHTGSQTAHS
GLKKPAFNLSVFGTSSSSVLSSSVLNSSQLGDSPFYPGKTTYGGAAAMRTARSRPATPYQ
PPVRRQIKAKPAGAQPCGVTSATARRILQSLERMSSPLADAKRIPSTVSSPLSASLNHTD
LDVSNFQAKRKRLEPSVPPVQKLVVPAAAAVSGNRSISFRPSLTPGGVNRGVEKNNRDTP
IRQSPPISDHAQAPSPSTSSLSYPLSSTPAASSAGSRGGKMKRERSIRPSSKKPDDEVAE
EPDLPPASLPSNFTLPTFNFSSPPPSSSLTSSTNPFATASEVLAANKEPAAPSTPPSVPF
TFSSPIVKATAASPPSFSPSSGFTFSAPTMKTGLSYSNGKIVPTVAPVKSVASEEKEFEG
PFKPAKVLKQGSVLDILKGPGFASPAQNAVYKPLPSASTSSAPLSGFGDKFRPPAGSWSC
GTCLLQNKSSDKMCMACLAPQPNTDSASKSDSKPTEAPASISSLFAPPAGSWDCDTCLVR
NKPDVVKCVACDTAKPGTGVKSSLTLPALSEASSTLSATSSTTTTATTTASSATGLLGFG
DRFKKPEGSWDCDVCMVQNKAQDVKCVACQSSKPGAVAAAVSTPVSAPASTAAPLLGFGD
KFKKPEGSWECEVCCVQNKAEDQQCVACQSAKPGAKIESKGFSSSFGIQSNSTESSSSGF
KFGTGSTDSTSAGLKFGGTFSDTTSTTGGFKFGFGSSDSTSKSEGFKFGGLSSDAASGGV
KLGSASSESTATKESVSKAFTFGGSMDDLLEKKTKSPDSSTGFKFGGDSGITFGSQASGT
ESSAFLFGAKPSEKRSSDSSFSFSVPQSKAEKDDAPAPSETVSTTATTTAANVIPIFGKS
LVAESSASKFGEPSAKEQTLVTSTFTFGKTEEKKDTSTPSGAVLFGASKEADKPAPTLSF
SFGEPDPPKDFPNPTLTFGKPAESAEPPKPSFSFGQSMTDTSTLKPTFGFMANSSSTPAS
SSSTPSLFGTPTTSSLVPTPAPSSTFVFGQSTSTEHTMEKTLMFGQQPQDSQPKPPAAPS
AAPAPAQPFQFGSGTNSSSPAFTFGAAASSTPASSAPPGNPSPFVFSSATPSSGFGSGQT
PIFGQSASQPSAPAFGSAAPSFSAITSPASAFGSKSNSAPVFGQQANPAPTFGSAASSTG
QGQRDFC
NT seq
4164 nt
NT seq
+upstream
nt +downstream
nt
atggagacgttccagagggtgatacaggtgcagtcggggtggaccggaacaacgtggctc
ctccccctaatggcagtgacgaagttaccccgctcccagatggacgagactctccagagc
cgagcacaagtaacacagcagcctggccttatcagtcgagtgacagatacagtgaagagc
atagtcccctcctggctgcagaaatacttcaaaaatggagacgttccagagggtgataca
ggtgcagtcggggtggaccggaacaacgtggctcctccccctaatggcagtgacgaagtc
accccgctcccagatggacgagactctccagagccgagcacaagtaacacagaaccatct
acaagtagagcgtcactgaacttccaggaagctctttcgagacctccgctcaatcggacc
cacctgcacttcccctccctggatggttcccctgcattaggtggcacaagctccctcttc
tcccagccctccacgtccacagcacccttctcagggagccctttcgctgtaacctccaac
ttctccctggtgaaagagattaaggactccagttctcagcatgaggatgacaatatctcg
actaccagtggcttttcgtcacgtgcgtctgataaagatgtgcccatatcgaagactatg
ccgctcctctggtctccagagacagaacgcacccacactggatcgcagacagcccactct
gggctgaaaaaaccagccttcaacctgtcagtttttggcacttcctcatcatcagtgttg
agcagttcagtgctaaactccagtcagttgggggattcacccttctacccagggaagacc
acatatggaggagctgctgcgatgagaacagctcgttcacgcccagctactccttaccag
cctcccgttaggagacagataaaggcaaagccagctggagctcaaccctgtggagtgacc
agtgccacagcgagacgcatcctacagtccctggagcgcatgtccagtcctcttgctgat
gcaaaaagaattccgtctacagtttcatcacctctgtcagcttcactgaatcacacagac
cttgacgtttcaaatttccaggcaaagaggaaaaggctggagccgtcagtccctcctgtg
caaaagctggtggtccctgcagctgctgcagtgtctggtaaccgttcaatatcctttaga
ccatcacttaccccaggtggcgtgaacagaggagtggagaaaaacaacagggacactccg
ataagacaatcccctccaatttcagatcatgcccaggctccctctcccagcacaagcagt
ttgtcctaccccttgtccagcactccagcagccagtagcgctggttcaagagggggcaaa
atgaagagggaaaggtccatcagaccttcatccaaaaaacctgacgatgaggttgccgag
gaaccagacctgccgcctgcctctcttcccagcaatttcactttgccaacatttaatttc
tcctctcctcccccctcctcatctctcacctccagcacaaatccatttgcaactgcctct
gaggtactggcagcaaataaggagccagctgcaccatccacaccaccatctgtccccttc
acgttttcgtcacctatcgtcaaggcaacagctgccagtcctccatctttctctccatca
tctggattcaccttcagtgcgcctactatgaagacaggcctctcttactccaatgggaaa
attgttccaacggtagcaccagtcaaatcagtggccagtgaagaaaaggagtttgaagga
cccttcaaacctgccaaggtcttaaaacagggcagtgtattggatatacttaagggacct
ggatttgcatcccctgctcagaacgcagtttataaacctttgccgtctgcatcaacatcc
tcggctcctctttctggttttggtgacaagttcaggccacctgcagggtcatggagctgt
ggcacttgcctattgcaaaacaagtcctcggacaagatgtgtatggcttgtcttgcaccg
caacccaacacagactctgcctctaaatcggacagtaaacccacagaagctcctgcaagc
atcagctccttatttgctcctccagctggtagctgggactgtgacacatgtttggtcagg
aacaaaccggatgtagttaaatgtgttgcttgtgacacggccaaacctgggactggagtg
aaatccagcctgactttaccagctctttctgaggcctcgtccaccctctctgccacctct
tctacaaccaccacagcaacaacaactgcttcttcagcaactggactgttaggatttggg
gacagatttaagaagccagaggggtcttgggattgtgatgtatgcatggttcaaaacaag
gcacaggatgtgaaatgtgtagcctgtcagagctctaaacctggagctgtagctgcagcg
gtctcgactccagtctctgcacctgcaagcactgctgcgcctttgttaggattcggggac
aaattcaagaaacctgaggggagctgggagtgtgaggtgtgctgtgtacagaataaggca
gaggaccagcagtgtgtggcctgccagtcagcaaaaccaggagctaaaatagagtccaaa
ggttttagttcatcttttggcattcagtccaacagtacagaatcaagttcatccggtttt
aagtttggtaccggctctacggactcaacctctgctggattgaagtttggaggcactttc
tcagatactacttccaccacaggtggatttaaatttggatttgggtcctccgactcaacc
tcaaaatcagagggcttcaaatttggaggcttatcctcggatgcagcttctggtggggtc
aaacttggtagtgcctcatcagaatccacagcaacaaaagagagcgtgtcaaaggccttt
acatttggtggatccatggatgacttgcttgaaaaaaagactaaatctccggattctagt
acaggatttaaatttggtggcgatagtggaatcacttttggctctcaagcttctggcact
gaaagttcagcatttttgtttggagctaaacccagtgagaaaagaagctcagattcatcc
tttagtttctctgtgccccagtccaaagctgagaaagatgatgctcctgctccctcagaa
acagtttcaaccaccgcaacaacgacggcagcgaatgtcattcctatttttggcaagtct
ttagtagctgaatcttctgcatcgaagtttggggagccatcagcgaaagagcaaacgcta
gtgacgtccaccttcacctttggaaaaaccgaagagaaaaaggacacctccacaccctcc
ggtgcggtcttatttggtgcttccaaggaagctgacaagccagcaccaaccttgagcttt
tctttcggcgagccggaccctccaaaagatttccccaatcctacacttacatttgggaaa
cctgcagagtcagcagaacccccaaaaccgtcatttagttttggacagagcatgacagac
acatctactctaaagcccacttttggcttcatggccaactcttcaagcaccccagcttcc
tccagctccacccccagccttttcggcactcccactacctcttccctggttcccacacct
gctccctcaagtacctttgtatttggccagagtacctccactgaacataccatggaaaag
actttaatgtttggacagcagccgcaggacagccagccgaaacctcctgcggcaccttct
gctgcacctgccccagcacaacccttccaatttggctcgggcacaaattcatcctcccct
gcgttcacttttggtgctgctgcgtcctcgaccccagcctcttccgctccacctggcaac
ccttccccatttgtcttcagttctgccacaccttcatctggctttggatctggacagacc
cccatctttggtcaaagcgcgtctcaacccagtgctcctgcatttgggtcagcggcacct
tcattctcggccatcacttccccagcttctgccttcggctccaaatccaattctgcccct
gtgttcggtcagcaagctaaccctgcacctacgtttggatctgctgcttcctccacaggc
caaggtcagagagacttctgttaa
DBGET
integrated database retrieval system
