Sinocyclocheilus grahami (golden-line barbel): 107593144
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Entry
107593144 CDS
T04918
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3A-like
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04020
Calcium signaling pathway
sgh04080
Neuroactive ligand-receptor interaction
sgh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
107593144
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
107593144
04082 Neuroactive ligand signaling
107593144
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sgh04040
]
107593144
Ion channels [BR:
sgh04040
]
Ligand-gated channels
Glutamate (ionotropic)
107593144
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Uds1
Motif
Other DBs
NCBI-GeneID:
107593144
NCBI-ProteinID:
XP_016138237
LinkDB
All DBs
Position
Unknown
AA seq
1033 aa
AA seq
DB search
MNFIFYTFLAYFYLGSQIFLLHTLLVQPAHSHPQPCHILARIGHTVRLGALLPPRQSVRV
RAALHRALSGLAESGNNFLPYNLSLDVVAREAPSGDPESLFRCVCQDIVVQGVSAVLAFP
QTQEEIVQMEFMSSFLEIPFISIIEHGEPLKTQNRFHLQMTTRIPPSGLVELLLAVLQRS
GWEESMAVLCQGWEDAGLLDLLKLTNSGWGPSHWHLRAALNLSHSTPHMANISDFLSEHF
NQDLSPPASVLLFGADPECASSVLRSAHDLGLTLPTVHWIMGHPLSPDALHSIGLPLGLL
AYGEVDHKPLDYYIRDALQLVNRAVTAATVVRPDLALIQNMVNCFDKPNKHELPSSGQYI
ARFLSNTSFVGLTGPVSVQRNLSRVLTSQRVHIWSLRRDAVGQPTWVTVGSWEGGRLDVE
EQGLWQGSPPRQHTEGQMGRVGRRWRAGFPVSGSRLRVVTLVEHPFVFTREVDEDGNCPA
GQYCLDAGTNNSETLDHLFTERAQGNSSFLPPDFSKCCYGYCIDLLEKLAEDMNFEYDLY
IVGDGKYGAVKGGQWTGLVGDLLSGVADMAVTSFSINSARSKMIDFTSPFFSTSLGILVR
SKDTAAPIGAFMWPLHWSMWMGIFVALHITAFFLTLYEWKSPFGMTPHGRNRVKVFSYSS
ALNLCYAILFGRTVSSKTPKCWTGRFLMNLWAIFCLLVLSSYTANLAAVMVGEKTFEEVS
GIHDAKLHHPSQGFRFGTVRESSAEDYMKKSFPEMHEYMRKFNEPTTPDGVATLKTDPPQ
LDAFIMDKALLDYEVSIDADCKLLTVGKPFAIEEHDVDLSHSSLDEINPFFFSFLFLQKI
HRALNMTYEDVKRQRANTEKSCNIQKAQPHPPPPPAPLGSFARWNNENANAAQEPKDNKR
VHFNLETLNTRRLLPRVMSEGGQSSATSALSSEAGTLLARVCENGGPVQGPASSSVRSSS
PSRDSELEELQAKIEEFRGHLKAALARRAELQTTLAKERAAAVIAPATTAAAPPTVTATI
CPALTKEPADLKR
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcatcttctacacattcttggcatacttttatttgggatcgcaaatattcctt
ctccataccctgctcgtccagcccgctcattctcacccgcagccctgccacatccttgcg
cggataggacacaccgtgcgcctgggtgccctcctgcctccccgccagtcggtccgggtg
cgggcggctctccaccgcgccctcagcggtctcgccgaaagcggcaacaactttcttccg
tacaacttgagcctggacgtggtggctcgggaagccccgagcggagaccccgagtcgctc
ttcaggtgtgtgtgtcaggatatagtggtccagggggtctcggctgtgctcgccttccct
cagacgcaggaggaaatagtgcaaatggaatttatgtcctcttttttggaaattcctttt
ataagcatcattgagcacggagagcctctcaaaacccagaatcgcttccacttgcagatg
acaacccgtattcccccgtcgggactggtggagctgcttctagccgtcctgcagcgcagt
ggctgggaggagagcatggcggtgctttgccaaggctgggaggacgctggtcttctggat
ctcctgaaactcacaaactccggctggggaccctcacactggcacctgcgggccgctctg
aacctctcccacagcacacctcacatggctaatatttctgacttcctgtctgagcacttt
aatcaggacctttctccacccgcctcggtcctgcttttcggggccgacccggagtgtgcc
tcttccgttctgcgcagtgcgcatgacctggggctgacattgcccacagtacattggatt
atgggacatcccctaagcccagacgcccttcattctattggtctacctttaggactgttg
gcctacggagaggtcgaccacaaaccgctggactactacatccgtgatgccctgcagttg
gtcaaccgagctgttactgcggccacagttgtacggcctgatctagctctcatccaaaat
atggtaaactgttttgacaaacccaacaaacatgagctgccctcatcaggacagtacatt
gccaggttcctctctaatacgtcctttgtagggttgacgggccctgtcagcgttcagcgc
aacctctcccgtgtactcacctctcagagggtccacatttggagtctacgccgtgatgcc
gtcggtcagcccacgtgggtgactgtaggcagctgggaaggtggtaggttggatgtagag
gagcagggattatggcagggatcgccccctcggcagcacaccgagggccagatgggcagg
gtgggtcgtagatggcgggccggctttcctgtgtcggggagtcgtctgcgggtagtcact
ctagtggagcacccgtttgtcttcactcgagaggtagatgaggatgggaactgtcccgct
gggcaatactgtctggatgcagggacaaataactcggaaaccctggaccacttgttcacc
gaacgggctcaaggcaacagcagctttttgccaccggatttcagcaagtgctgctatgga
tactgtattgatctgctggagaagctggcagaggacatgaactttgagtatgacctgtac
atagttggggacgggaaatatggagcagtcaagggtggccagtggacagggttggtgggc
gacctgctgagcggggtggctgatatggctgttaccagcttcagcatcaactcagctcgc
agtaaaatgatcgacttcaccagtccgttcttttccacgagtttgggaatactagtgcgc
agtaaggacacggcggcacccattggagcgttcatgtggccgttgcactggtccatgtgg
atgggcatctttgtggcactgcatattacggcgttcttccttaccctctatgaatggaag
agtcccttcggcatgacgcctcatgggcgaaaccgcgtgaaggtcttctcctactcctca
gccctcaacctttgctacgccatcctcttcggccgcacagtctccagtaagacgcccaag
tgttggactggacgtttcctgatgaacctgtgggccatattttgcttgctggttttgtct
agttacactgcaaacctggctgcagttatggttggggaaaagacctttgaagaggtctct
ggaatacatgatgccaagctccaccacccatctcagggattccgattcggcactgttcgg
gaaagcagtgcggaggattacatgaaaaagagttttcctgagatgcacgagtacatgcga
aaattcaacgaacccaccacacctgatggtgtcgccactctcaagacagatccgcctcaa
cttgatgcttttatcatggacaaagccctgctggactacgaggtgtccattgatgccgac
tgcaagctgctgacagttggaaaaccttttgctattgaagagcatgatgttgatctctct
cattcatcccttgatgagataaatccttttttcttttcttttctttttttgcagaaaatc
cacagagcactgaacatgacttatgaggatgtgaaacggcagcgggcgaacacagagaaa
agttgtaacatccagaaagcccagccgcatccgccacctccacctgctcccctcggatcc
ttcgccagatggaacaacgagaacgccaatgcggcgcaggagcccaaagacaacaagagg
gtccatttcaacttggagaccctcaacacgcgccgtctcttgccccgcgtcatgtccgag
gggggtcagtccagcgccacctccgcattgagctccgaagctgggactttactggcgaga
gtgtgtgaaaacggagggcccgttcaggggcccgcctcttcctcagtgagatcctcaagc
ccctccagagacagcgagctggaggagctccaggccaagatcgaggaattccgcgggcat
ttgaaagccgctctagctcgtagggcggagcttcagactacactggccaaagaacgagcg
gctgccgtcatcgccccggcaaccaccgcagcagctccgcccacagtcacagccaccata
tgccccgccctcaccaaagagccagcagatttgaaaaggtga
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integrated database retrieval system
