Sinocyclocheilus grahami (golden-line barbel): 107593190
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Entry
107593190 CDS
T04918
Name
(RefSeq) rootletin-like
KO
K16469
rootletin
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sgh03037
]
107593190
Cilium and associated proteins [BR:
sgh03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
107593190
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rootletin
PUMA_CC
ATG16
Motif
Other DBs
NCBI-GeneID:
107593190
NCBI-ProteinID:
XP_016138286
LinkDB
All DBs
Position
Unknown
AA seq
1958 aa
AA seq
DB search
MSCEGDQGLEAVIQKLEETLLNPDSGGEEKTFTLRGDEEESNITTVPARIREIITRNLAD
TPTGESSEVEENQLPKDLPSQMCADRDQLLSRQAALTSRLEQMLLQQSGDSDQQSVYGTE
QGWLREEGRSYRLKLQAFQESQHRQAQLVQKLQAKLLQYKKRCGNLEQQVLEKTSESENL
RLSLQSHLDSSAHRLQRFEQEHSMDVQSKLALLEDEQERCSGLSQVNALLREQLEQANEA
NRALSESLQKAREEAEQRDTRLRRELEMNTSRNGREQARVRSLWRQAAFLRSSFTQLRAF
ADRSLSDMRAECVVAGRRLQTACVNLEASMSQPCTPASSGVSALENQLRDKLKEAMQLQA
RFDAEKVELNSRILELGDMVKQLRAQNIEKTSNLTALRSSLDSMEINRSEDRTEKDALRS
EISSLQQLLHNINQVVSGEISSDLSKDEHPSVSAGSISSSQQDCILIAVQRALLQQKTQI
QELQACLEAFQEQVATLQDQLHVGEDETRNLEQRIRELQQENQLLERSEEDSTRDTQRYR
TSLGIVNSEKGELERQLSALQQQLECAQAEQEALRSSSLDVQRQRDLLRQQREDLERQLA
RERSESERGRHTLEQLEMRHSDVRKELVTLKEALSQLNLQKEVLEDEKSSLAQALSRAEA
QNTEQELALTKLQSEDAGLQDSLAKMGALSEGLAKDKVELNRLLLQVEAEKAELGERKRD
AELERAAAREELAQLQQELLDLTAEKRALEASHIHLQESRVTQDAEYNVLQRKKCSALEQ
HAQVSKQKQALQEQLNTCRREMELSAASLKKTCKERDELARDKANLTVQLTSEQRKYKAL
AQDLAALRAERESLESGLLDRQELASMLEADRARLEGENASLQQANETMTSELSNVHSEL
EQQMSRALQEKQALELKLAQVERNTQQTLITTQQSHQEQLHTERKHKERMRAELCSQREQ
AESQLRAECEELRMQSRRVQQQLQEELAKLQQHCTESLLQAESHKQQVLSEKEAEKATLT
ERIITVERDIETAALEKDRMRRDFLTKQEQGKDTVLGLQAELQDLRSRFEESLSSREVSE
RSLNDQIRELSLQRQESQQEVERLRRELSEVEESRDSGRKELIEAHRELRECLQDRDAQR
REGMELKRALGDVVREKEAIQASNHELRTAVKRAEFENNSLKRVGEEKDQRLAVLEECKS
SLQQEVLKLRTNMRELEKSRLQARRELQELRRQVKTLEGQCTQQGQELSDMQIRLTQEEH
REEEMRKETFTLRQRVLESDAGREAALKEAAGLQRHVAELEEVQRQEKELQQQQDANLQE
SQVKQREEVARLEGALQEAQAQLRELGLKVSLAEARAQGLEEQLGQNDAIRRDLEHRLNV
LSSTLKRTLGSGRGRRSPAPGECRRSPSPWRTRSPVKGEPMSDEPGVSGLLVCSLSPSRR
EDGELDLDSVHVLLRNFQQELRDTQRERDEAQAQVHSLSKQVESLQASQERGNTRIQMLK
QSIRELEEGKRELAKHLEGTQASLALRDEVVQHGELQNRIMSEELAKMKNSQHITEAEAK
ALKEKLERSQASEESLEAERRRMKETCEAAEARAARLELARRGLEGELQRAHLRATENES
EVSSLQERLNNLRRELGDSEEHAALLKVEGERLATALAHTELQESQLREQLQSMAASLTE
SNAATGAAQEQAAQLQRALTASEHDRKMLQERLDKTREALTNSRKQNHGLSERLQILQRS
QEESELRVSELDKQTRGLQEAVRQRQQAKQEVQESYALLHGEKDLLQEQVATLQTTAHRL
QGEKAELERTLLRLEKDRSSLKRILEKVEKNRQRKEAEVLHAEREREQQEQKIRNLEQDL
SETQAEIHTLQSQISILEQTHSQRLLEVTARHRQELDLETEQMRDSQQQAERALEAREKA
HRQRVHCLEEQVCTLKEQLEQEMKRRQAYMKQMMRLGL
NT seq
5877 nt
NT seq
+upstream
nt +downstream
nt
atgagttgtgaaggggatcaaggactggaagccgtgattcagaagctggaggagacgctg
cttaacccagatagcggtggagaggagaagactttcactctgcggggagatgaggaggag
tccaacatcacaacagttcctgcccgcatccgtgagatcatcaccagaaacctggctgat
acgcccacaggcgagagcagcgaggtggaggagaaccagctgccgaaggatctgccttct
cagatgtgcgcagacagagaccagctgcttagcaggcaggctgctctcactagccggctg
gagcagatgctgttgcagcagtcgggagattcagaccagcagagtgtgtatggcacagag
cagggttggctaagagaggaaggacgatcttataggctgaagctccaggcctttcaagag
agccaacacagacaggctcagctggtgcagaaactacaggcaaagttgctccaatataag
aagagatgtggaaatctagagcagcaggtgttggagaaaacctcagagtcagagaatctg
aggctctcgctccagtcacacctagactcttcagcacaccgtctccagcgctttgagcag
gaacacagtatggatgtccaaagtaaacttgcactgctagaggatgagcaggaacggtgt
tctggtttgagccaggtcaatgcgctgctccgggaacaactcgaacaagccaacgaagcc
aatcgggccctgtcggaaagcctgcagaaggcacgagaggaggcagagcagagggacact
cgactcaggagggaacttgagatgaatacctcccgaaacggccgcgagcaagcccgtgtg
cgatctctgtggcgccaggccgccttcctgcgaagctctttcacccagctgcgggccttt
gctgacaggagtctatccgacatgcgagccgagtgtgtggtggctggccgacgtcttcaa
acggcctgtgtgaatttggaggctagcatgagccagccttgtacccctgctagcagcgga
gtatctgcactggagaatcaactaagagacaagctgaaagaggctatgcagctgcaggcc
cgctttgacgcagagaaagtagagcttaactctaggatcctggaattgggtgacatggtg
aaacagctcagagcacagaacattgagaagacaagcaatctgacagcactgcgaagcagc
ttggacagtatggaaataaatcggtccgaagaccgaaccgagaaggatgccttacgcagc
gagatcagcagtctgcaacagttactgcacaacattaatcaggtggttagtggagagatt
tcctcagatttatcaaaagatgagcacccatctgtttctgcaggatctatttcctcttct
caacaagactgtattctgatagctgtgcagagagccctcttacagcagaagacacaaatt
caggagctgcaggcatgtctggaagctttccaagagcaggttgccaccttgcaagatcag
ctgcatgtgggggaagatgaaaccagaaacctggaacaaagaatccgggaactgcagcaa
gagaatcaacttctggagagatctgaggaggacagcactagagatacccaaagataccgc
acttcactgggcatagtaaacagtgaaaaaggagagcttgaaaggcagctctcggccctg
cagcagcagctggaatgcgcacaagcagagcaggaagctttgagaagctcctctctggat
gttcagaggcagagagacctcctcaggcagcagagggaggacctggagaggcagctggct
cgagaacgctctgaatccgagaggggacgacacactctggagcagctggagatgagacac
tcggatgtgcgtaaagagctggtcacactaaaagaagctctgagtcagctgaatttacag
aaagaggttttggaggatgaaaagagcagtcttgcacaggctctctctagggcggaggcc
cagaatactgagcaggaactggcgctcacaaaactacaaagtgaagatgcagggctacag
gactccctggccaagatgggagccctgagtgagggactggctaaagataaggtcgaattg
aaccgtcttctcttacaggtcgaggctgaaaaggcagagcttggcgaacgcaaacgggac
gcagagctagagcgagcggcagccagagaagagctagctcaacttcagcaggagctgtta
gaccttacggcagagaagcgtgctctggaggcctcacacattcaccttcaagagagccga
gtgacccaggatgcagagtacaacgtcctacagaggaagaaatgttcagccctggagcaa
cacgcccaggtcagtaagcagaagcaagccctgcaggaacagttgaacacatgtcgtaga
gaaatggagctgagtgctgcctcgctaaagaagacttgcaaagagagagatgaactggca
agagacaaagccaatctcacagtgcagctcacctcagagcaacgtaaatacaaggccctg
gcccaagacctggccgctctgcgggctgagagagagtctctagagtcaggcctgttggac
aggcaggaactggcctcgatgctagaggctgaccgggctaggctagagggagagaatgct
agtctacagcaggctaacgagactatgacgagtgagctgtctaatgttcacagtgaacta
gagcagcaaatgtcccgggctttgcaggagaaacaggctttagagttgaagcttgctcag
gtcgagagaaacacacaacaaaccctcattacaacacagcaaagccatcaggaacaactg
catactgagcgaaagcacaaggagcgcatgcgtgcggagttgtgttcacagagggagcag
gcagagtcgcagctgcgggctgagtgcgaggagctgcgcatgcagagtcgcagagttcag
caacagctgcaggaagaactggccaagctgcagcagcactgtacagaatccctgctgcag
gccgaaagtcataaacagcaggttctatctgagaaggaggcagagaaggctactcttact
gagcgcataattactgtcgagcgtgacatagagacagctgcccttgaaaaggatcgtatg
cgtagagacttcctgacaaaacaggagcagggcaaggacacagttttagggttgcaggca
gagcttcaagacctacggtctcgtttcgaggagtctctgagttcccgtgaagtttcggag
cgcagcttaaatgaccagatcagagagctttctctgcagaggcaggagtctcagcaagag
gtggagcgtttgagaagggaactgagtgaggtggaggagagcagggactctggccgtaag
gaactgatcgaggcccaccgagagctgagggagtgtttgcaggacagggacgcccagcgg
cgtgagggcatggaactgaagagagctttaggagatgttgtgagagagaaagaggccatc
caggcttccaatcatgaactccgtacagctgtgaagagagccgagtttgaaaacaacagt
ttgaagcgagtgggagaagaaaaggaccagaggctggcagtgttagaagaatgtaaatcc
tccctccagcaggaggtgctgaagctgagaaccaacatgcgtgaacttgagaaatctcgc
ttgcaggcacgcagggaactgcaggaactgcgcagacaggtgaagacattagagggtcag
tgcactcaacaagggcaagagttgagtgacatgcagatcagactgactcaggaagagcat
agagaggaggaaatgagaaaggagacctttactctcagacaaagagtactggaaagtgat
gctggcagagaggcagctctgaaggaggctgcaggcttgcagcggcatgtagcagaactg
gaagaagtgcagcgccaggagaaagagttgcagcaacaacaggatgccaatcttcaggag
agccaagtgaagcagcgtgaggaggttgctcgcttggagggggcactgcaggaagcccag
gcccagctcagggagcttgggctgaaggtgagtctagcagaggcccgggcccaagggctg
gaagagcagctgggacagaatgacgccatacggagagatcttgagcacaggttgaatgtt
ctcagttctaccctgaaacgtacacttggaagcggacgtggaagacgttcgcccgcaccg
ggggaatgcagacggagtccctcaccatggagaactcgatcacctgtgaaaggtgaaccc
atgtcagatgagcctggggtaagtggattgctggtgtgttctttgtccccctcccgcaga
gaagatggagaattggatttggactcagttcacgtgttgctacgtaacttccagcaagag
ctcagggacacacagagagagcgggatgaggcccaagcacaggtgcacagtctcagcaag
caggtagaaagcctgcaagccagtcaggaaagaggcaacacacgtatacagatgctgaaa
caatctatcagagagctggaggagggaaagcgtgagctggctaagcatttagaggggaca
caagcatcactcgccttacgggatgaggtggttcagcatggggaattacagaataggatt
atgagtgaagagttggccaaaatgaagaacagccaacatataactgaggcagaagccaaa
gcactgaaggagaagctggagcgctcccaggcctctgaggaaagtctggaggctgagcgc
cgccgtatgaaggagacctgtgaggccgcggaagctcgagctgccaggctggaactcgca
cgccgggggttggagggagagctgcagcgtgcccacctccgagcaacagagaatgagtcg
gaggtcagctcactgcaggaacgcctcaacaacctccgcagagaactgggagacagtgaa
gagcatgctgccctcctgaaggttgagggtgagaggttggcaactgccttggcgcacaca
gaactgcaggagagccagttaagggagcaactgcagtccatggctgcatccttgactgag
agcaatgctgctacaggagcagcacaggaacaggctgcgcagctgcagcgagctctcaca
gccagtgaacatgaccggaagatgctgcaggaaaggttggataagacacgggaggctctg
acaaacagtaggaagcaaaatcatggcttgagtgagagactacagatcctgcagagaagc
caggaagagtctgagctcagggtctctgaactggacaaacagacacgaggcctgcaggag
gctgtgagacagaggcaacaggctaagcaggaggtgcaagagagctatgcactcttgcac
ggagaaaaggatctgcttcaggagcaggtggctaccctgcagaccactgcacatcggctg
cagggagagaaagctgagctggagaggacactgctccgtctggaaaaagacaggtcctct
ctaaagcgtatcttggagaaggtagaaaaaaatcgccaaaggaaggaggcagaggtattg
catgctgagcgtgagagagaacagcaagaacaaaagatccgaaatctagagcaagattta
agcgagacacaggccgaaattcacacgctacagtcacagatctctatcttggagcagact
cactcccagaggctcctggaagtgacggctcgccacaggcaagagctggacctggagacc
gagcagatgagggactcccagcagcaggcagagagagcactggaggctcgagagaaagct
caccgccagagggtccactgcttggaggaacaggtttgcacactgaaagaacagttggag
caggagatgaagaggaggcaagcatatatgaagcagatgatgagattggggctctaa
DBGET
integrated database retrieval system
