Sinocyclocheilus grahami (golden-line barbel): 107593402
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Entry
107593402 CDS
T04918
Name
(RefSeq) laminin subunit beta-1-like
KO
K06243
laminin, beta 2
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04510
Focal adhesion
sgh04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107593402
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107593402
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
Motif
Other DBs
NCBI-GeneID:
107593402
NCBI-ProteinID:
XP_016138604
LinkDB
All DBs
Position
Unknown
AA seq
1839 aa
AA seq
DB search
MVMARYFTVLLLVLPVVAQELPSTPHGCMEGSCYPATGNLLIGRAINLTATSTCGLDRPE
QYCIVSHLQDLNKCFKCDSQEPYDADHHNKNHRVENVIYQRDSRGELTWWQSVNGEENVG
IRLNLEAEFHFTHLIMKFKTFRPAAMIIERSSDFGHTWRPYRYFAYNCTKTFPRVPAHSL
RFTDEVICEERYSDIEPSTEGEVIYKVLDPAIHVKDPYSLDIQDLLRITNLRINFTKLHT
LGDNLLDRRLDVLQKYYYALYELVVRGSCFCYGHASECVPVPGVTTRDSSMIHGHCVCKH
NTVGLNCERCRDFYHDAPWWPAETDNAHTCRECNCNGHSNQCHFDMAVYLATGNVSGGVC
DNCLHNTMGRKCETCKHFYYQDQTRDIRDPAACIPCDCDPVGSVEGGVCDSHTDLDLGMI
GGQCRCKQNVRGQRCDYCKEGHYGLSLDNPLGCQPCNCDPRGITMLGAPCDQISGDCSCK
RYVTGRYCNQCLPEYWGLSNDLAGCRPCDCDFGGATSSRCRMDNGQCECRPHLIGRQCSE
VQPAFFCASLENNKYEAEEALGHSPDDPALPGNPRPQAETDCVQHLNNQLRRNRRHHHRH
IAQQQRATLRRIRQLQQTPSVSTVHRERQPGQMVTWTGPGFARVKDGAGLKFTISNIPYA
MEYDIMIRYEPESTEDWEALVSVTSLDLPTSLRCGNMLPTEQMYTVTMPHHRRYVDMPRP
FCFEPNNQYVVSIRFQRHAVSHRHLTAFTLIDSLVLIPRYEELPGFQGDDAPDERRRQEM
ELYMCLDSFMTVPMPALAELCTTLICSISAIMYNGALACQCDRQGSLSAECDKVGGQCHC
KPNVIGRKCDQCAPGTYGFGPYGCTVCDCHSQGSVGHQCDPVTGQCPCQHGATGRQCSEC
QPGQWGFPNCRQCQCNGHAEICDPETGACYECRDYTAGQLCERCVNGFYGNPILGSGEHC
RPCPCPGHPDSGHSNGASCHADYASNQILCHCGEGYTGPRCDRCAPGYYGDPEQPGGTCR
PCQCNGNIDPQDPESCDPRTGQCLRCLYNTDGHLCSECKPGYYGNALAQDCRCCTCVTAG
TLEDYCTDGVCHCDKQTGQCPCKPNIIGHNCDQCSPNHWNFGSDCGCEPCECAQPNALST
HCNMFSGQCHCQPGFGGRQCNECEAFHWGDPRVQCEECNCHPLGSDMAQCDRVTGACVCK
EEASGRHCDECAHGFTGNFPKCIPCHPCFQLWDDAICQIGRDLTHIKDVIAMILEKGEVP
GLSDGRIRELEKKLAQVQDLIRDGDRERTYNLISQVNDDLRAEIALTDGRLMGVSRELNV
TADLDNALKRNLTALEKELKDLNNTLHRLHIELDNYLTAGFAEQFENVRKYYQSSLNSEK
RCNASVYGPQSPVEQSEDTRNRTEALLKERKDLFLRTVAANNKSLSELEEKAHEIDRKLQ
HLSNRVCGGHGNASANSSCPNSPCGGAGCRDSDGALKCGGKGCKGTVGASVTALDNADDV
HKNLTATSEELQTIAKKLRDIATLTQTVKTQAEDTLDKAQSKKELFENSNNILKDFIEKI
KDFLNEEGADPESIEKVAQQVLAISLPVNRTVIVNVVEQIKANIANLTNVEGVFNHTSEQ
LAEVRDLLKRAQDAKAKAEGVSDNINKTKEALETSQSAIKITEKEMTTALENLKNAQNIT
TMVDNKLLDLDNNLMDVMMRLANLSHGVDLLKNKTEQNREMAKDAKAQSDNATQEAAGLQ
EELANAENWYKELIEKVDSVGGTGEGDINQRAMEMKKEAEELLKKATVGMETLRKLERKF
NKNEQKMQQQRDELADLEKNVTEVREYIRLKVMGYNNCQ
NT seq
5520 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggccagatatttcactgttctccttctggttcttccagttgtggctcaggag
ctgccctccaccccacacggctgcatggaaggcagctgttacccggcaacgggaaatctt
cttattggccgagctattaacctgaccgccacctccacctgtggcctggataggcctgag
caatactgcattgtcagtcatttgcaggatttaaataagtgctttaagtgtgactctcag
gagccgtacgatgccgatcatcacaacaagaaccacagggtggagaatgtcatctaccag
agagacagcagaggagaactcacctggtggcagtctgtaaatggagaggagaatgtcggt
ataagactgaatcttgaggccgagttccattttactcatctcatcatgaagtttaaaacg
tttaggcctgctgctatgataattgagcgttcttctgattttggccatacatggaggcca
tatcgctacttcgcctacaactgcaccaagactttcccccgggttcctgcccactcgctg
cggtttactgatgaggtcatctgtgaggagcgctactctgacattgagccgtccactgaa
ggagaggtcatctacaaagtgcttgatcctgctatccatgtcaaagacccatacagtctt
gacattcaggatttgttgcggatcactaacctacggataaacttcactaaactgcacact
ctgggtgataacttgcttgaccggcgtctggacgtgctgcagaaatattactatgctctg
tatgagctagttgtgcgcgggagctgcttctgctatggtcacgcgtcagagtgtgtacca
gtacccggagtgaccaccagggattctagcatgattcatggacattgtgtgtgtaagcac
aacactgtgggattaaactgtgagcgctgcagagatttctaccatgatgcaccctggtgg
cccgccgagactgataacgcacatacatgcagggaatgcaactgtaatggtcactccaac
cagtgtcactttgacatggcggtctatctggctacggggaacgtcagtggaggtgtgtgt
gacaactgtctccacaacaccatgggccgcaaatgtgagacctgtaaacatttttactat
caggatcaaacgcgagacatcagagacccggcagcatgtatcccctgtgactgtgacccg
gtgggatctgtggagggtggagtttgtgacagtcatactgatctggatctgggtatgatt
ggcggtcagtgtcgctgtaagcagaatgtcaggggtcaacgctgtgactactgcaaagag
ggacactatggactcagtcttgacaatccactgggatgccagccatgtaactgtgacccc
cgtggcatcactatgctgggggcaccgtgtgatcagatcagtggtgactgctcctgtaag
agatatgtaaccggccgctactgcaaccagtgtctgcctgaatactggggactcagtaat
gatctggctggctgcagaccctgcgactgtgactttggtggagcaaccagcagcagatgc
aggatggacaacggtcagtgtgagtgtcgacctcatctgattggtcggcagtgttctgaa
gtgcagcctgcgtttttctgtgcttctctggaaaataacaagtatgaagcagaggaagct
ttaggtcactctcctgatgatcctgctcttccaggcaacccaaggcctcaggctgagact
gactgtgtgcagcatctcaacaatcagctgagaagaaaccgtcgtcatcatcaccggcac
attgcccagcagcagagggcaacactgagacgcatccgacagttgcagcaaactcccagc
gtaagcacagtgcatagagagagacaaccaggtcagatggtcacatggaccgggccgggc
ttcgctcgggttaaagacggcgctggcctcaagttcaccatcagcaatatcccttacgct
atggaatatgacattatgatcagatatgagccagagtccacagaggactgggaggctcta
gtgagcgtcacatccctggatttacccacaagtctccgctgtggaaacatgctgcccaca
gagcagatgtacacagtcacaatgccccaccacaggaggtacgttgacatgccaaggccc
ttttgctttgagccaaacaaccagtatgtggtttccatccgtttccagcgtcatgccgtg
tctcaccgacatctcaccgccttcaccctgatagactcacttgtactgatacccaggtat
gaagagcttccaggtttccagggtgacgacgccccagatgagcgtcgacgtcaggagatg
gagttgtacatgtgtttggattccttcatgaccgtgccgatgcctgcgctggccgagctg
tgcaccacactcatctgcagcatctctgcgatcatgtataacggtgccctggcatgtcag
tgtgaccgtcagggttcactgagtgcagagtgtgacaaagtcggaggtcaatgtcactgt
aaacccaatgttattggccgtaaatgtgatcaatgtgcaccggggacttacggatttggg
ccatatggctgcactgtatgtgactgccactctcagggctctgtagggcatcagtgtgac
cctgtgacgggccagtgtccgtgccagcatggggcgactggccgccagtgctcggaatgc
cagccaggtcagtggggatttccaaactgtagacagtgccagtgtaacggtcatgcggag
atctgtgaccctgaaacaggtgcctgctatgagtgcagagactacacagctggacagttg
tgtgagagatgtgtaaacggtttctatggtaacccaatattgggttctggcgagcactgt
cgcccctgtccatgtccaggacaccctgacagtggacactccaatggagcttcctgtcac
gcagattatgcctccaatcagatcctctgccactgtggtgaaggatatacaggtcctcgc
tgtgatcgctgtgcccccggttactatggtgatcctgagcagcctggcgggacatgccgg
ccatgccagtgcaacgggaacattgacccccaagacccagagtcatgtgacccacgaact
ggccagtgcctcaggtgcctgtataacaccgacggccacttatgctctgagtgtaaaccg
ggttactatggaaacgcactcgctcaggactgtaggtgctgtacttgtgtaacggcaggc
actttagaggactactgtactgatggagtgtgtcactgtgataaacagactggtcaatgc
ccctgcaagccaaacatcatcggtcacaactgtgaccagtgctcccccaaccactggaac
ttcggctcggactgtggatgtgagccctgtgaatgtgcccaaccaaatgccctcagtacc
cactgcaacatgttcagtggtcagtgtcattgtcagccaggttttggagggcgacagtgc
aatgaatgtgaggcgtttcactggggtgatcccagagtgcagtgtgaagagtgtaactgc
catcctctggggtccgacatggctcagtgtgaccgcgtaacaggtgcatgtgtgtgtaag
gaggaggcttcaggacgacactgtgacgagtgcgcccatggctttaccggaaacttcccc
aagtgcattccctgccatccctgcttccagctatgggatgatgccatatgccagatcggc
cgggatctgacccacatcaaggatgtcattgccatgattctggaaaagggtgaggtgccc
ggactcagcgatggccgcatacgtgaactggagaagaagctggcacaggttcaagacctg
attcgagatggagaccgagagagaacctataacttaataagccaggttaacgatgacttg
agagcggagatagctttgactgatgggcgtctgatgggcgtgagtcgggagctcaatgtg
actgcagaccttgacaatgctctgaaacgaaacctaactgcactggagaaagaactgaaa
gacttgaacaacacacttcaccgactgcatatagagctagataactatctcactgctgga
tttgcagagcagtttgaaaacgtgcgcaagtactaccagagttcattgaattcagagaag
cgctgtaatgcctccgtatacggaccccagagtcctgtggaacagtctgaagacacacgt
aaccgtaccgaagccctgctgaaagagagaaaggacctcttcctccgtacagtcgccgcc
aataataagtctttgtctgaactggaggaaaaagctcatgagatagaccgaaagctccag
cacctaagcaacagggtatgtggtggccatggcaacgctagtgcaaatagtagctgtcca
aatagcccatgtggaggagctggctgccgtgacagcgacggtgcgctgaagtgtggaggg
aaaggatgtaaaggaactgttggtgcctcagtgacggccttggacaatgctgatgatgtt
cataagaacctgaccgctaccagcgaggagctacaaaccattgctaaaaagctcagagac
atcgctacactcacgcagactgtgaagactcaagcagaggacacacttgataaagcccag
agcaagaaagaactctttgagaactccaacaatatactcaaagacttcattgagaagatt
aaagactttttgaatgaggagggagcagatccagaaagcattgaaaaagtggcccagcag
gttttggcgatctccttgccagtcaacaggaccgtaatagtcaacgtcgtcgagcagatc
aaagccaacatcgccaacctcaccaatgtggagggagtgttcaaccacacctcagagcaa
ctggccgaagtcagggatctgcttaagagagctcaagatgcaaaggcaaaagctgaaggg
gtgagcgataacatcaataaaactaaagaagcacttgaaacctctcagagtgccataaaa
attactgagaaggaaatgaccacagccctggaaaacctcaagaatgcccaaaacatcact
actatggtggacaacaaactcttagatttagacaacaacctcatggatgtgatgatgcga
ttggccaatttgtcacatggagtagatttattgaaaaataaaacggagcagaacagggag
atggcaaaagatgccaaagctcagtctgacaatgcaactcaagaggctgccggacttcaa
gaggaactggcaaatgctgagaattggtataaggagctgatagagaaggtggactctgtg
ggtgggacaggagaaggtgacattaaccagagagccatggagatgaagaaagaagcagag
gaactgctgaagaaggccaccgtgggcatggaaaccctcagaaaactggagagaaagttt
aacaagaacgagcagaaaatgcagcagcagcgggatgaactggcagatctggagaaaaat
gttacagaagtcagagaatatatccgattaaaagtcatgggctacaacaactgtcagtag
DBGET
integrated database retrieval system
