KEGG   Sinocyclocheilus grahami (golden-line barbel): 107594019
Entry
107594019         CDS       T04918                                 
Name
(RefSeq) E3 ubiquitin-protein ligase NRDP1-like
  KO
K11981  E3 ubiquitin-protein ligase NRDP1 [EC:2.3.2.27]
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    107594019
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sgh04131]
    107594019
   04121 Ubiquitin system [BR:sgh04121]
    107594019
   03029 Mitochondrial biogenesis [BR:sgh03029]
    107594019
Enzymes [BR:sgh01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     107594019
Membrane trafficking [BR:sgh04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Ubiquitin E3 ligases
    107594019
 Autophagy
  Mitophagy
   PINK1-Parkin associated proteins
    107594019
Ubiquitin system [BR:sgh04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    107594019
Mitochondrial biogenesis [BR:sgh03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-dependent mechanism factors
    107594019
SSDB
Motif
Pfam: USP8_interact zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_6 zf-C3HC4_4 zf-rbx1 zf-RING_UBOX zf-Nse zf-RING_5 zf-C3HC4_3 Sina_ZnF U-box zf-ANAPC11 zf-RING_10 LXG DUF641 zf-TRAF zf-TRAF_2 Sos7 SlyX Trimer_CC zf-RING_16
Other DBs
NCBI-GeneID: 107594019
NCBI-ProteinID: XP_016139433
UniProt: A0A672N5R9
LinkDB
Position
Unknown
AA seq 201 aa
MGYDVTRFQGEVDEDLLCPICSGVLEEPVQAPHCEHAFCNACITQWFAQQQICPVDRSVV
TLAHLRPVPRIMRNMLSKLQISCDNAGFGCTATLRLDQLQSHLKDCEHNPKRPVTCEEGC
GLEMPKDEMPNHKCIKHLRSVVQQQQTKIADLEKTAAEHKHQLAEQKRDIQLLKAYMRAI
RSANPNLQNLEESIEYNEILE
NT seq 606 nt   +upstreamnt  +downstreamnt
atggggtacgacgtcaccaggttccaaggagaggtggacgaggatctgttatgtcccatc
tgcagcggggtgctggaggagccagtgcaggccccgcattgtgagcatgctttctgtaac
gcctgcatcacacagtggtttgcacagcagcagatctgtcctgtggaccgctccgtggtg
actcttgcccatcttcgacccgttccccgaatcatgcgtaacatgctttccaagctgcag
atctcctgtgataacgccggcttcggctgcacggccactcttcggctcgaccagctgcag
tcacatctcaaggactgcgagcacaaccctaaacgacccgtcacgtgtgaagaaggctgc
gggttagaaatgcccaaagatgagatgcccaatcacaaatgtattaagcacctacgcagc
gtggtgcagcaacagcagaccaagattgcagatctagagaagactgcagctgagcacaag
caccaacttgcagaacagaaacgtgacatccagctcttgaaagcttacatgcgagcgata
cgaagcgctaaccctaacttacagaacctggaggagagcatagagtacaatgagatccta
gagtga

DBGET integrated database retrieval system