Sinocyclocheilus grahami (golden-line barbel): 107594039
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Entry
107594039 CDS
T04918
Name
(RefSeq) integrin alpha-5-like
KO
K06484
integrin alpha 5
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03266
Virion - Herpesvirus
sgh04145
Phagocytosis
sgh04510
Focal adhesion
sgh04512
ECM-receptor interaction
sgh04517
IgSF CAM signaling
sgh04518
Integrin signaling
sgh04810
Regulation of actin cytoskeleton
sgh04820
Cytoskeleton in muscle cells
sgh05100
Bacterial invasion of epithelial cells
sgh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
107594039
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107594039
04517 IgSF CAM signaling
107594039
04518 Integrin signaling
107594039
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
107594039
09144 Cellular community - eukaryotes
04510 Focal adhesion
107594039
09142 Cell motility
04820 Cytoskeleton in muscle cells
107594039
04810 Regulation of actin cytoskeleton
107594039
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
107594039
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
107594039
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sgh04147
]
107594039
04515 Cell adhesion molecules [BR:
sgh04515
]
107594039
04090 CD molecules [BR:
sgh04090
]
107594039
Exosome [BR:
sgh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107594039
Cell adhesion molecules [BR:
sgh04515
]
Integrins
Integrin alpha subunits
107594039
CD molecules [BR:
sgh04090
]
Proteins
107594039
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Membra_charge
Motif
Other DBs
NCBI-GeneID:
107594039
NCBI-ProteinID:
XP_016139453
LinkDB
All DBs
Position
Unknown
AA seq
1048 aa
AA seq
DB search
MGSKRHRSKTSASSHNPSCSPMGLSLLILLPLSVAFNLDVENPAVYTGPSGSYFGYSVDF
YMTDSSVSIIVGAPKANTSQPNIREGGSVFYCPWSLSQSQCSSIEFDIQGDLNMIVNQAV
LQGEFKSHQWFGATVRVHEDSVLACAPLYSWRTMEDKPHADTTGSCFLSVKNFTKFVEYA
PCRTEFRGRKGQGYCQGGFSADFTREGKVVLGGPGSYFWQGQVITAVKQEIVKAYYPGFF
LTSVEGQIQTKQKKEITFDDTYMGYSVAVGEFSGDDDEGECCYSVAVGEFSGDDDEDLIS
SSAMGSYYGYAVAATDINNDGMTDLLVGAPMFMLRDSDGRLEELGRVYVYMQNGPLDLTP
QLPHLTGTQTFGRFGSSITPLGDLNQDGYNDVAISCPFGGENKQGLVLIYNGHVGGLREK
PSQVIAGQWASATPSALPASFGYALRGGKDLDNNGYPDLIVGAFGADTAVLYRSRPIVNT
SATLTVYPTMINPEEKVCTISRGNETLQVSCVNLSFCLSANGKHLPNHLEFNVEIQLDRL
KQPQKGAVRRALFLDTQLPALQRTLTVPNGARVCSDTKIFLRDEKDFRDKLSAIFVALNF
SLNPQAAADRYGLWPILNYQTAELIEQKAQILLDCGEDNICVPDLKLSVHGDRKEVYMGD
DNSLTLTFNAKNDGGGAYEAELYVVLPPEADYSGIARNNESLTQLTCSYETENQTRYLSC
DLGNPMKSGTSLWAGLRFTVPRLKDTHRFVQFDLQIRSKNENNSQSEVVPYKLEVVVQSD
VILQGVSRPDKVFFPPPNWKLTKNVMVEQDVGPSVQHTYELVNNGPSRISHTLLQLKCPM
RLQSNRFIYPLEVTTEGPVNCTTHNIVNPLNLKLQQSSTELPPLRDAAHEHHIEKRETHK
GELSQLTNLSCSSVDCWTLTCNVGLLERGTSAILHVRSRIWAETFMENPYKSLILECLAS
YKVEKMPYAILPKVTPSGAKKMVTPVVWNKPDGTYAVPLWIIILAILAGLLLLALLIYVL
YKLGFFKRTPYGTAMEKAQLKPQAASEA
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggggtccaaaaggcaccgttcaaagacttcagcgtcttcacacaacccgagctgctct
ccaatgggactttcactgttgattcttctacctttgtctgttgccttcaacttggatgtg
gagaacccagcggtgtatactggacccagcggtagttacttcgggtactcggtggacttt
tacatgactgactcaagtgtgagtattatagttggagcacccaaagccaacaccagccag
cccaacatcagggaaggaggatcagtcttctactgtccatggagcctcagccaatcacaa
tgcagcagcatagagttcgatatacagggagatctaaacatgatagtgaatcaagcagta
cttcagggagagttcaaatcccatcagtggtttggagcaacagtacgagtgcatgaagat
agtgtgctggcttgtgcccccctctactcctggagaaccatggaggacaagcctcatgct
gatactactggctcatgttttctgtccgtcaaaaacttcactaagtttgtggaatatgct
ccgtgccgcacagaattccgtggaagaaaaggacaaggctactgtcaaggtggattcagt
gctgattttacacgggaaggaaaggtggtgcttggaggacctggcagttacttctggcaa
ggccaagtgatcactgctgttaaacaagaaatagtcaaagcctattacccaggattcttc
ttgacctcagtggaaggccagattcagaccaaacagaaaaaggagatcacatttgatgac
acctacatgggttactcagtggctgtcggcgagttcagtggtgatgatgatgaaggtgag
tgttgttactcagtggctgtcggcgagttcagtggtgatgatgatgaagatttaatatca
tcatctgctatgggttcctactatggctatgcagtggctgctactgacataaacaatgat
gggatgacggacctgctggttggcgcaccaatgttcatgcttcgtgactctgatgggagg
ttggaggagttgggtcgggtctatgtgtacatgcagaacggacctctggatctcacacct
cagctacctcatctcaccggcacacagacattcggccggtttggcagctccattacccct
ctcggagacctcaaccaagatggttacaatgacgtggccatcagttgtccgtttggtggg
gaaaacaaacaaggactggtgctcatctataacggacatgttggaggactcagggaaaag
ccctctcaggtgatcgctggccaatgggcttctgccacaccgtcagctctacctgccagt
tttggttatgcccttcgtggaggcaaagacctggataataatggctacccagatcttatt
gttggcgcatttggtgcagacactgccgttctttataggtctcgtcctattgtgaacacc
agtgctaccttgactgtatatccaactatgattaatcctgaggagaaagtttgcaccata
agccgtgggaatgaaaccctgcaagtgtcctgtgtcaacctgagcttttgcctctcagcc
aatgggaagcacctaccaaatcatctcgagtttaacgttgaaattcagctggaccggctg
aagcagccgcagaagggggccgtacggagagctctgtttttagacacccagcttcccgct
ctgcagaggactctgactgtgccaaatggagccagagtctgcagtgacaccaagatcttc
ttgcgggatgagaaggacttcagggataagctgtcggccatcttcgttgcgctcaacttc
agcctgaaccctcaagctgcggcagacagatacggcctgtggcccatccttaactaccag
acagcggagctcatcgaacagaaagcccagattttattggactgtggagaggacaacatc
tgcgtccctgacctgaaactctctgtgcacggggacaggaaggaagtgtacatgggcgat
gacaactctctgaccctgactttcaacgcaaagaacgacggaggcggagcttacgaagcc
gagctgtatgtggtcttgccaccagaggccgactacagcggaatagcccgcaataacgag
agcctgacccaactgacctgcagttatgagacggaaaatcagacccgttacctcagctgt
gacctggggaaccccatgaaatcaggcactagcctatgggccggactgagattcacagta
ccacgtctgaaggacacacacagatttgtgcagtttgacctgcagatccgtagtaagaat
gagaataactcccagagtgaagtcgtcccctacaagttggaggtggtggtccagtcagat
gttattctacagggtgtctcccgaccagacaaggtcttctttcccccaccgaactggaag
ttgaccaagaatgtgatggttgaacaggatgtcggaccctccgtccagcacacttatgag
ttggtgaacaacgggccgagccgcatcagtcacactctcttgcagctcaaatgccccatg
aggcttcaaagtaacaggttcatttacccgctggaggtcacgacggagggccctgttaac
tgcaccacccacaacatagtcaaccccttgaacctcaagctccagcagtcttctaccgag
ctgcctcctttacgagatgcggcacacgaacaccacattgagaagagggaaacgcacaag
ggcgagctgtctcagctgaccaatttgtcttgctccagtgtggattgctggactctaacg
tgtaacgttggcctgctggagcgagggactagtgccatactgcatgttcgctcgcgaatc
tgggcagaaacgttcatggagaatccttataaaagcttaattctggagtgccttgctagt
tacaaagtggaaaagatgccatatgccattttgcccaaagtgactcctagtggtgctaaa
aagatggtcactcctgtggtctggaataagccagacggtacgtatgctgttcctctgtgg
atcatcattctggctattctggctggtcttctactgcttgcactactgatctacgtcctc
tacaagctcggcttcttcaagagaactccgtacggcacggccatggaaaaagcccagctc
aaacctcaggctgcatccgaggcctaa
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integrated database retrieval system
