Sinocyclocheilus grahami (golden-line barbel): 107594236
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Entry
107594236 CDS
T04918
Name
(RefSeq) transitional endoplasmic reticulum ATPase-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04137
Mitophagy - animal
sgh04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107594236
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
107594236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgh03019
]
107594236
03009 Ribosome biogenesis [BR:
sgh03009
]
107594236
04131 Membrane trafficking [BR:
sgh04131
]
107594236
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sgh04147
]
107594236
Messenger RNA biogenesis [BR:
sgh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
107594236
Ribosome biogenesis [BR:
sgh03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
107594236
Membrane trafficking [BR:
sgh04131
]
SNARE
SNARE associated proteins
Others
107594236
Autophagy
Aggrephagy
Other aggrephagy associated proteins
107594236
Exosome [BR:
sgh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107594236
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_28
AAA_14
RNA_helicase
Vps4_C
AAA_18
nSTAND3
AAA_17
Mg_chelatase
Parvo_NS1
ATPase_2
IstB_IS21
ATPase
AAA_7
DUF815
AAA_24
ABC_tran
Zeta_toxin
ResIII
Sigma54_activat
NACHT
TsaE
NB-ARC
Viral_helicase1
SLFN-g3_helicase
bpMoxR
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
107594236
NCBI-ProteinID:
XP_016139683
UniProt:
A0A672QWI9
LinkDB
All DBs
Position
Unknown
AA seq
805 aa
AA seq
DB search
MPAAGASDPKSEDFSTAILKQKIRPNRLIVDEANNEDNSIVCLSQVKMEELQLFRGDTVV
LRGRKRRQTVCIILTDDTCGNERVRMNRVTRNNLRVRLGDVISINACPDVKYGKRIHVLP
IDDTIEGLTGNLFEVFLKPYFLEAYRPVHKGDIFLVRGGMRAVEFKVVETDPSPHCIVAP
DTVIHCEGEPIKREDEEESLNDIGYDDIGGCRKQLAQIKEMVELPLRHPGLFKAIGVKPP
RGILLYGPPGTGKTLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAP
AIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRVHVVVMAATNRPNSVDPALR
RFGRFDREIDIGIPDSTGRLEILQIHTKNMKLSDDVDLEQISAETHGHVGADMAALCSEA
ALQAIRKKMILIDLEDDSIDADLLNSLAVTMDDFKWALSQSNPSALRETVVEVPQVNWED
IGGLDEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQAN
FVSIKGPELLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKARGGGAGDAGGAAD
RVINQILTEMDGMTNKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDMPSRSAILR
ANLRKSPIAKDVDLAYLSRITEGFSGADLTEICQRACKLAIREAIEAEIRAERQRQARKE
TAMDDDYDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGNFRFPTAPQ
SGGGQGSGQGSGGHFRDDGDDDLYQ
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccgctggagcctcagatccaaagtcggaggatttctccactgctattctgaag
cagaagattcggccgaatcgactcatcgtggatgaagccaacaatgaggacaacagtatt
gtgtgcttgtcacaggttaaaatggaggaattgcagctgtttcgtggagacactgtggtg
ttacgcggtcggaagcggagacagacggtctgcatcattctcacagacgacacgtgtggc
aatgagcgtgtgcgcatgaacagggtgacgcgcaacaacctgcgtgtgcgcctcggtgac
gtcatcagtatcaacgcttgtccagatgtgaaatatgggaagcgcatccatgttctgccc
attgatgacactatcgaggggctaacaggcaacctgtttgaggtttttctaaagccgtat
ttcctggaggcctaccgacctgttcacaaaggtgatattttcctggtcagaggaggcatg
agagcagtggagtttaaagtcgtagaaacagaccccagcccacactgcatcgttgccccg
gataccgttatccactgcgaaggagaaccaatcaaacgagaggatgaggaggagagcctg
aatgacatcgggtatgatgacatcgggggttgtcgtaaacagctggctcagattaaagag
atggtagagctgcctctcaggcaccccggcctgttcaaagccatcggagtgaagcctccg
agaggaattctgctgtacggtccacccgggacgggcaagacgctggtggctcgtgcagtt
gctaatgagacgggagctttcttctttctcatcaatggtcctgaaatcatgagtaaactg
gcaggggagtctgagagcaacctgagaaaagctttcgaggaggccgaaaaaaatgcccct
gctatcatcttcatcgatgagctggatgcaatcgctccgaaacgagagaagactcatggt
gaggttgagcggaggatcgtctctcagctgctcacactgatggacggcctgaaacaacgc
gttcatgttgtagttatggcagccacaaacagacccaacagtgtggatcctgctcttcgg
cgttttggtcgttttgatcgagagattgacattggcatccccgattccaccggcaggctg
gaaattttacaaattcacaccaagaacatgaaactgtcggacgatgtggacctggaacag
atctccgctgaaacgcacgggcacgtgggagcagatatggctgctctgtgttcagaggca
gcgctgcaggccatccgcaaaaagatgatcttaattgatctggaggacgacagcatcgat
gcagaccttctcaactcactggccgtcaccatggatgacttcaagtgggctctaagtcag
agtaacccatctgctctgagggagacggtggtggaggttccacaggtaaactgggaggac
attggaggacttgatgaggtgaagcgagagttacaggagcttgtccagtatcccgtggag
tatcctgataaatttctgaagtttgggatgactccatcgcgaggggttttgttctatggt
ccacctggttgcggcaaaaccctactagccaaagccattgccaacgagtgccaggctaac
tttgtgtctattaaaggcccagagctgctcaccatgtggtttggtgaatcagaggcaaat
gtcagagatgtgtttgacaaggcacggcaggcggccccatgcatcctgttctttgacgag
ctggactctattgctaaagcacgaggtggcggggctggagatgcaggaggtgcggctgac
agggtcatcaaccagatcttgacagaaatggatggaatgaccaataagaagaatgtcttt
atcatcggcgccaccaacaggccagatatcattgatcctgcaatcctgaggcctggtcgt
ttggatcagttgatttacatccctctacctgacatgccctcccgctctgccatcctgcgc
gccaacctccgcaagtcccccatcgctaaggacgtagacctggcatatctgtcccgtata
acggagggattctcaggagcagacctgactgagatctgtcagagggcctgtaagcttgct
attagagaagccatagaagcagagatccgtgctgagagacagcgccaagccaggaaagag
actgctatggatgatgattatgacccggtgcctgagatcaggaaggatcattttgaggaa
gccatgagatttgcccgtcgctctgtcagtgataatgacatacggaagtatgagatgttt
gctcagactcttcagcaaagccgtggatttgggaacttcaggtttcctacagcacctcag
tcaggtggaggtcaggggtcaggccaaggctctgggggtcatttcagagatgatggagat
gatgatctctatcagtaa
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integrated database retrieval system
