Sinocyclocheilus grahami (golden-line barbel): 107594272
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Entry
107594272 CDS
T04918
Name
(RefSeq) exosome complex component CSL4-like
KO
K07573
exosome complex component CSL4
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107594272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgh03019
]
107594272
Messenger RNA biogenesis [BR:
sgh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
107594272
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
107594272
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
107594272
NCBI-ProteinID:
XP_016139743
UniProt:
A0A672R3I9
LinkDB
All DBs
Position
Unknown
AA seq
194 aa
AA seq
DB search
MAPTKLCVPGERLCSTEDCIPGTGTYLRHGYIFASLAGYVLRKNQGEELPVISVVRETET
QLLPDVGAIVTCKVTSINPRFAKVHILYVGSTPLKDRFRGTIRREDVRATEKDKVETYKS
FRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSEAGAQMVPISWCEMQCPCTHAKE
FRKVARVQPEYLQA
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccacgaagctgtgtgttccaggtgaaaggctctgcagcacggaggactgtatc
cccggcaccggcacgtatctgcggcacggctacatcttcgcttcgctcgcgggatatgtg
ctgagaaagaaccagggagaggagttgccggtgatttcagtcgttagggagacagaaaca
caacttttgcctgacgtcggtgccatcgtcacctgtaaggtgacgagtatcaacccacga
tttgctaaagtccacatcttatatgtcggttcgacgccactaaaagacaggtttagaggc
actatcagaagagaagatgtgagagcgacagagaaagataaggtggagacgtataaaagc
ttcaggccaggcgacattgtccttgcaaaagttatctctttgggcgacgtgcagtcgaac
tacctgctgaccacagcggagaacgagctgggtgtagtcgtggcccacagcgaggcgggg
gctcagatggtgcccatcagctggtgtgagatgcagtgtccatgcacacacgccaaagag
tttcgcaaggtcgcgcgggtacagccggagtacctgcaggcctga
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