KEGG   Sinocyclocheilus grahami (golden-line barbel): 107594286
Entry
107594286         CDS       T04918                                 
Symbol
taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    107594286 (taf5l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sgh03021]
    107594286 (taf5l)
   03036 Chromosome and associated proteins [BR:sgh03036]
    107594286 (taf5l)
Transcription machinery [BR:sgh03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     107594286 (taf5l)
   Coactivators
    SAGA/TFTC/STAGA complex
     107594286 (taf5l)
Chromosome and associated proteins [BR:sgh03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     107594286 (taf5l)
    STAGA complex
     107594286 (taf5l)
    TFTC complex
     107594286 (taf5l)
    SAGA complex
     107594286 (taf5l)
    SLIK complex
     107594286 (taf5l)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd EIF3I WDR55 TFIID_NTD2 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_Aladin DSE1_N WD40_MABP1-WDR62_1st CFAP251_N NBCH_WD40 Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_WDR41 Beta-prop_IFT140_1st ANAPC4_WD40 PAC11 Beta-prop_VPS8 Beta-prop_NOL10_N Beta-prop_Vps41 RMC1_N ASA1 Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_SPT8 Tricorn_2nd Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_IP5PC_F PROPPIN PEP5_VPS11_N Beta-prop_WDR19_1st WD40_like TRIP13_N
Other DBs
NCBI-GeneID: 107594286
NCBI-ProteinID: XP_016139767
LinkDB
Position
Unknown
AA seq 603 aa
MKRVRTEQIQYTVTQYLKRRQYIDTDGSLKGAKLSQSAEEMAASLTVQTESSCANVVSAA
PCQSVPQQYETQFSRLRSFLQEAEAPLVKEVSGVLFPLFLYLHLDMARCGLKGAVDSFYS
RFHSFFQQDPEQKAIVDLLRGVVTPQDVTSNPKLCSLLDHKYVVHLTDQAYNYLLRYLQS
DDNSAICWALSTHVQVEVTAARRTDYQLYGTGIGAGNTTSTSSSSTAWTAGDGSEGAEHV
EVTAGLPQNEAALEALQDCIKRVREGAPSLTTVCFYAFQHTDQLLNTAEVSADSRLLAAG
FDNSAVKLWSLRARKLKAGPHRVDVSKIRLACDVLEEEADDEDASGSEIKTLRAHSGPVY
RTAFLTDGSGLLSCSEDSTVRFWDLNSFTNTVLYRGHTYPVWDVDVSPCSLYFSTASHDR
TARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYVATGSTDKTVRLWSTQQGASVRLFTG
HRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGSLFKDLRGHTDSITSLSFSQDSSLVA
SASMDNSVRVWDIRSAHGSAPTDGSSSELIGQYTGSTSNILNVQFMACNLLLVTGTALEK
QEQ
NT seq 1812 nt   +upstreamnt  +downstreamnt
atgaagcgggtgcggacggagcagatccagtatacggtgacccagtacctgaagaggagg
cagtatatagacacagatgggtctctgaagggggccaaactctcccagtctgctgaggag
atggcagccagtctgacggttcagacggagtccagctgtgcgaatgtggtgtccgcagcc
ccgtgtcagtcagtcccgcagcagtatgagacccagttctccagactgcgctccttcctg
caggaggcagaagcaccgttagtgaaggaggtgagcggcgtcttgtttccgctcttcctc
tacctgcacctggacatggcgcggtgtggcctgaagggggcggtagactcgttttacagt
cgcttccactcattcttccagcaggaccctgagcagaaagccatcgtagacctgctacga
ggagtcgtcacgcctcaggatgtgacctcaaaccctaaactctgctcgctcctggatcac
aagtatgtggtgcatctgacggatcaagcgtacaactacctgctgcggtacctgcagagc
gacgacaacagcgccatctgctgggcgctcagcacacatgtgcaggtggaggtgaccgca
gcgcgccgaaccgactaccagctgtacggcacaggcataggagcaggaaacactacctcc
acttcctcttcctccactgcatggactgcgggggatgggtcggagggggcggagcatgtg
gaggtcacggctgggttacctcagaacgaggcggcgctggaggcgttgcaggactgcata
aagcgcgtgcgagaaggtgctccttcgctcaccaccgtctgcttctatgccttccagcac
acggatcagctgctgaacacggccgaggtgtcggcggacagccgcttgctggcggccggc
ttcgataactccgccgtgaagctgtggagtctgcgggccaggaagctgaaggcgggacct
cacagggtcgacgtgtctaaaataagactggcctgtgacgtgctggaggaggaggcagat
gatgaggatgcctcaggcagtgagataaagaccctgcgcgctcacagtggccccgtgtac
cgcacggcgttcctgacggacggctccggcctgctgtcctgttcagaggactccaccgtt
cgcttctgggacctgaacagcttcacgaacacagtcctgtaccgcggccacacttacccc
gtctgggacgtggacgtgagtccctgcagcctgtacttctccacggcgtcccacgaccgc
accgcgcgcctctggagcttcgcgcgcacctatccgttgcgtctgtacgccggacacctc
tccgacgtcgactgcgtcaaattccaccccaactccaactacgtggcaacaggctccacg
gataaaaccgtgcgcctgtggagcacgcagcagggggcgtccgtgaggctgttcaccggg
caccgcgggcccgtgctgtcgctcgccttctcgcccaacggcaagtacctggcctcggcc
ggagaggaccagagactgaagctgtgggatctggcatccggcagcctgttcaaagacctg
cggggtcacaccgacagcatcaccagcctctccttcagccaggacagcagtctggtggcc
tccgcctccatggacaactcggtgcgggtgtgggacatacgcagcgcccacggcagcgcc
cccaccgacggctccagcagcgagctgattggacagtacacgggcagcactagcaacatc
ctcaatgtgcagttcatggcctgcaacctgctgctggtgacgggcactgcgctggagaaa
caggaacagtga

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