Sinocyclocheilus grahami (golden-line barbel): 107594568
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Entry
107594568 CDS
T04918
Name
(RefSeq) PDZ and LIM domain protein 5-like
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107594568
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sgh04990
]
107594568
Domain-containing proteins not elsewhere classified [BR:
sgh04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
107594568
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
DUF4749
PDZ
PDZ_6
LIM_FHL2-3_N
PDZ_2
Motif
Other DBs
NCBI-GeneID:
107594568
NCBI-ProteinID:
XP_016140146
LinkDB
All DBs
Position
Unknown
AA seq
563 aa
AA seq
DB search
MDNLLSVWIIWCQTFRPALQRNLCFFLSRLLLSEVFHPLSISRLSDGGKAAKAGVAVGDL
VLSIDGISTDGMNHLEAQNKIKSSTDKLNLSLQKASSLLKPYVAPKDDSVEIIKPVPMTT
SIPSSSDITNSTHITSSSNRSARPFGGAGSPHIASIPSAVSAFAPASSAQNPNPQAPPTP
TDGSPNHLPAVPRPSVYNTPINLYSNENACEVAMGQRRGLLESQGESSQLNGLPRKPITE
TDIEFYHVPTHGDASRKRIMEDTEDWRPRTGTSQSRSFRILAQITGTESEFDPSQEAESA
KKTTNEELDDSQPSAHVTCPVKTMIKAPGTPVRSTAGLITPTFGVMSNSTPLGPALDRPM
PRPHPKDEASLVQMAEHIPAGTRTPVCAHCDMIIRGPFLVAMGKSWHPEEFTCAHCSVSL
SELGFVEEQGSVYCQHCYEEFFAPACARCQFKILGEVINALKQTWHVYCFLCASCQQPIR
NDTFHLEDGEPYCERDYYSQFGTGCRGCDFPIEAGDKFLEALGGTWHDTCFVCSVCSVSL
EGQTFFSKKDKPLCKKHAHTLKI
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggacaatctgctgtctgtgtggatcatttggtgtcagacctttcgacccgcattgcag
aggaacttgtgtttctttttgtcaaggttgttgctttctgaagtcttccaccctctctct
atttcacggctgtcggacggaggaaaggctgctaaagcaggagtggctgtgggagatctg
gtcctgtccatcgacggcatcagcactgacggcatgaaccacctcgaggctcagaataag
atcaaatccagcacagacaaactcaacctctccttacagaaagcttccagtcttctgaaa
ccatatgtggcaccaaaggatgattctgtggaaatcatcaaacccgttcccatgacaacc
tccattccatcttcttctgacatcacaaactccacccacatcacttcatcctccaatagg
agtgctcgcccgtttggaggggcagggtcaccacacatagcctctattccgtccgccgtg
tctgcttttgcacccgcctcctcagctcaaaaccctaatccacaggctccgcccactcct
actgatggttcacccaatcatctaccggcggtgccccgcccttcagtgtataacacaccc
atcaatctctactccaatgagaatgcctgtgaggttgccatgggccagaggcggggcctg
ctggaaagccagggtgaaagctctcagctgaatggacttcctcgtaaacctatcacagag
acagacattgagttttaccacgtcccgactcacggtgatgccagcaggaaacgcatcatg
gaggacacagaggactggcgcccacggacaggaacttcacaatcccgctcgttccgtatc
ctggctcaaatcaccggcactgaatctgaattcgatccctcgcaggaggctgaatcagcg
aagaagacaacaaatgaggagctggatgattctcagcccagcgctcatgtcacctgtcct
gtaaagaccatgatcaaagccccgggaacacctgtcagaagcacagcaggtctcatcact
cccacttttggcgtcatgagcaacagtactcctttaggccccgccttagaccggcccatg
ccccgcccacaccccaaagacgaagcctcattggtccagatggcagaacacatccctgct
ggaacacgcactcctgtgtgcgctcactgcgacatgatcatcagggggccgttcctggtg
gcaatggggaaatcgtggcacccggaggagttcacgtgcgctcactgcagtgtgtctctg
agcgagctgggttttgtggaggaacagggctctgtttactgccagcactgctatgaggag
ttcttcgccccggcctgtgcacgctgccagttcaaaatcctgggggaagtgatcaatgca
ctcaagcaaacctggcatgtgtattgtttcctgtgtgcatcctgtcagcaaccgataaga
aacgatacttttcatcttgaggatggagagccgtactgcgagagagattactacagtcag
tttgggacgggctgccgtggttgtgatttcccgatagaagcaggagacaagtttctggag
gccctgggcggcacctggcacgacacctgcttcgtgtgctcagtgtgcagcgtcagtctg
gagggtcagaccttcttctccaaaaaggacaaaccgctttgcaagaaacacgctcacact
ctcaaaatataa
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