Sinocyclocheilus grahami (golden-line barbel): 107595596
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Entry
107595596 CDS
T04918
Name
(RefSeq) LOW QUALITY PROTEIN: general transcription factor IIH subunit 4-like
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03022
Basal transcription factors
sgh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107595596
09124 Replication and repair
03420 Nucleotide excision repair
107595596
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgh03021
]
107595596
03400 DNA repair and recombination proteins [BR:
sgh03400
]
107595596
Transcription machinery [BR:
sgh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
107595596
DNA repair and recombination proteins [BR:
sgh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
107595596
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
107595596
NCBI-ProteinID:
XP_016141533
LinkDB
All DBs
Position
Unknown
AA seq
463 aa
AA seq
DB search
MKLRVQLQCKNLHEYLKELSPEILDRLYNHPATCLAVYRALPSLANNYVMHLLFLDHPLP
QAAVALWVKKDSQKDHDQCVSVLTGLRLWHSQHLQGGLQGFVLNPVFKDNLRIALLGGGK
PWADEGSNLSPDRHGRDVESLDRYAMERWEVILHFMVGSPSAAVSQDLAQLLIQAGLMKS
EAGEAPCITSAGCQFLLLDTASQLWYFTLQYIKTAQSRGMDLVEILSFLFQLSFSTLGKD
YSVEGMSESLLTFLQHLRELGLVFQRKRKSRRYYPTRLAITLAAGVTVNPASGSSALGAT
PGTGDTGFIVVETNYRVYAYTNSELQIALVALFSEMLYRFPNLVVAQVTRESVQQAXNGI
TAQQIIHFLRTRAHPVMLKQTPVLPPTITDQIRLWELEKDRLQFTEGMLYNQFLSQADFE
VLRDRAQGLGVLVWQNPAHRVIVVTPHGHSEVKRFWKRQKSHT
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttcgagtccagctgcagtgcaagaacttgcacgagtatctaaaggaactgagt
ccggagatcctcgacaggctctacaatcacccagcaacatgcctggcagtctacagggca
cttccatcattggcaaataattatgtgatgcatttgctgtttttagaccatccactccca
caagctgcagtcgcgctgtgggttaaaaaagacagtcagaaagaccatgatcagtgtgtg
tcggtgttaaccgggctacggctctggcacagtcagcaccttcaaggtggactccaaggc
tttgtgctgaaccctgtgtttaaagacaacctgagaatagcacttctaggcggtggtaaa
ccgtgggcagatgagggcagcaacctgagtcctgatcgtcatgggagggatgtagagagt
ctcgaccgctatgctatggagcgttgggaggtcatccttcacttcatggtgggctctccc
agcgcagccgtcagccaggatctggcccagctcctcatacaggccgggctcatgaagagc
gaggctggtgaggctccttgtatcacatcagcagggtgtcagttcctgctgctggacaca
gcatctcagctgtggtacttcaccctgcagtacatcaaaacagcacagtcgagaggaatg
gacctggtggagattctttcctttttgttccagctgagtttttccactcttggtaaggat
tattctgtggagggcatgagtgagtctctgctcacatttttgcaacatttacgagagttg
ggtctggttttccaaagaaagaggaagtcaaggaggtactaccctactaggctggccata
actctagctgcaggagtcacagtaaaccctgcctctggatcttctgcactcggagccaca
ccaggaacaggagacacaggcttcatcgttgtagaaacaaattaccgtgtatatgcctac
acaaactctgaactccagattgcactagtagctctatttagcgagatgctgtatcggttt
cctaacctggtggttgcccaggtaaccagagagtcggtgcagcaggccnntaacggcata
actgcacagcagatcattcacttcttaaggacccgagctcacccagtaatgcttaaacag
accccggtccttcccccaaccatcacagatcagatcagactgtgggagctcgagaaagat
cgcttacagtttactgagggaatgttatacaaccagtttttatcccaggctgattttgaa
gtgttgcgggacagggctcagggtttaggtgtgctggtttggcagaaccccgctcacagg
gtcatagtggtgacgccacatggacacagcgaggttaagagattctggaagagacaaaag
agccatacataa
DBGET
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