Sinocyclocheilus grahami (golden-line barbel): 107595700
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Entry
107595700 CDS
T04918
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B-like
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04010
MAPK signaling pathway
sgh04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107595700
04020 Calcium signaling pathway
107595700
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sgh04040
]
107595700
Ion channels [BR:
sgh04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
107595700
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
EGF_Hmr-1
Motif
Other DBs
NCBI-GeneID:
107595700
NCBI-ProteinID:
XP_016141680
LinkDB
All DBs
Position
Unknown
AA seq
2165 aa
AA seq
DB search
MARFGDDLPTRYGGPAGAGRGGARAGGPSGGQRMYKQSMAQRARTMALYNPKQTKQNCFT
VNRSLFIFSEDNVFRKYAKRITEWPPFEYLILTTIIANCIVLALEQHLPAMDKTPMSERL
DDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILTTLGSQFDLRT
LRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGVEFYMGKFH
FTCFKVDTGEKVGDYPCGAERPSRVCPNGTICREYWTGPNFGITNFDNILFAILTVFQCI
TMEGWTDVLYHPHIIPNPYNFLSSVNQTYVNQNKMEFAKERERVEKRQEFLKLRRQQQIE
RELTGYLEWICKAEEVLLAEEDQNAEEKSPLDGAWYRRKQNNPVLKRTKTRKGRNDLISA
EEGEEHFTDISSVAPPGSPFARASLKSSKNDSSSYFHRKEKRIRFFIRRMVKAQSFYWIV
LCLVGLNTMCVAIVHYDQPEWLTKALYLAEFVFLGLFLTEMTLKMYGLGPRNYFHSSFNC
FDFGVIVGSIFEVVWAAIQPGASFGISVLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKS
IISLLFLLFLFIVVFALLGMQLFGGQFNFEDETPTTNFDSFPAAIMTVFQILTGEDWNAV
MYHGIESQGGVRGGMFSSVYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEEQEEA
AKKSMALQKAMEVKEVSPMSAANISIAAKEQQRSLQKMSIWEQRTNQLRRHNLRNSSEAL
YNELEPEERLRVSSALHLRPDMKAHHDRPLVVEHRDDTVDNSRTDRDGDTPDCQPSSGHP
RKHHRCRGENGDAGEGRHHRHHSQNIEHQGSLEHSSNQDGGHTNHHMAGSPEEGIGMEER
EHRHHHSRRSREVNGNGNGTIGNGGRGEGRIRGHREGEGENGERRRHRPRVKAQSTLDGE
ECRENGGKHRGRPTGTDSLATSPLQSPTEEKPEDKDNLKNSTRVGPTGVNIPVTITDPPG
ETTVIPMNNIDGDSLLLNEEKKDLDELNQNAPKHILPYSSMFVFGPTNPVRRLCHYVVNL
RYFEMCILTVITMSSIALAAEDPVQANAPRNDVLKYLDYVFTGVFTFEMVIKMIDLGLLL
HPGSYFRDPWNILDFIVVTGALVAFACSSFMGSQQSVTRGTKGKDINTIKSLRVLRVLRP
LKTIKRLPKLKAVFDCVVNSLKNVLNILIVYILFMFIFAVIAVQLFKGKFFHCTDESKAL
EKDCRGQFLEFGSDGLALTLPREWKKYDFHYDNVLWAFLTLFTVSTGEGWPTVLKHSVDA
TYEDQGPSPGYRMETSIFYVVYFIVFPFFFVNIFVALIIITFQEQGDKAMSECSLEKNER
ACIDFAINAKPLTRYMPQDKQSYQYKIWKFVVSTPFEYSILTMIAINTVVLMMKFHDAPN
PYEDMLKWLNIIFTALFTLECILKVIAFGPLDKRINLSFLRLFRAARLIKLLRQGYTIRI
LLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIMLSEESAINIHNNFQTFFQALML
LFRSATGETWHEIMLSCLSERPCDRDSGYTGKECGSDFAYFYFVSFIFLCSFLMLNLFVA
VIMDNFEYLTRDASILGPHHLDEFIRVWAEYDPAACGRMSYLEMYEMLRHMSPPLGLGKK
CPPRIAYKRLVRMNMPIAEDSTVHFTSTLMALIRTALEIKLASGVLAQRLCDAELRKEIN
KIWTNLSSKTVDLLVTPHKHNELTVGKVYAALMIFDYYKQNRAKRLQPQQAAPGTQSKVG
VLFRPMLPLTHLHSQEPLVLKAPPSSQLHTTPQPDAPPTSFHLTNGDAVQSQSSAMKTSP
SGDIPQEVTQEANRRPVQRGQSVDVPNTYRSQELVEMTDMENDSDVGGYPVLEGHGRAAS
MPRLNAGFQRSHLRHTAGTYLAPIADVSPMRRSASSLTPQRGVREVNLSDYDLERPKMAP
GQTLTQERERDRAHHHHHHHHRCQRRRDKKHKSLDRVISEEQPPHAADPNTESLPRERAR
ERDRGRSHERKHHSSSAVERKQRYYSCDRYGSHEQGHSVSAGPSRSTSPGEPHDPNRLKQ
GVSTAKGTSVVHTSGTSTPCRGRRQLPQTPLTAAFFFSSRGSGSVFPFIVFMGISSKTIY
KNTVF
NT seq
6498 nt
NT seq
+upstream
nt +downstream
nt
atggctcgctttggagacgatctgcccacccgctatggaggtccagcgggcgccgggaga
gggggagcccgggcaggaggtccctcgggcggtcaaagaatgtacaaacagtcgatggct
cagagagccaggacaatggctttatataatcctaaacaaaccaaacagaactgcttcact
gtcaaccgctctttgttcatcttcagtgaggacaatgtcttcaggaaatacgccaaaaga
ataaccgaatggcctccatttgagtacctgatcctcactaccatcatcgccaactgcatc
gtactggccctcgaacagcatctccccgccatggacaagacccccatgtctgaacgcctg
gacgacacagagccctactttatcggaatattctgtttcgaggccggcattaagatcatc
gccttgggctttgtgtttcacaaaggctcttacctacgcaacggctggaacgtaatggac
tttgtggtcgttcttaccgggattttaaccacactgggttcgcagtttgacttaagaacg
ttgcgggccgtcagagtgctgagacccctcaaactggtgtctggaatcccaagtcttcaa
gtagtattaaagtccattatgaaggccatggttccccttcttcagattggactgctgctc
ttctttgccattgttatgtttgccatcatcggcgtcgagttctacatgggcaaattccac
ttcacctgctttaaagtggatacaggagaaaaagttggtgattacccatgtggagcagaa
cgtccttcaagagtgtgtcccaatggaacaatatgtagggagtactggacaggacccaac
ttcggcatcaccaatttcgataacatcctctttgccatcctcacagtcttccagtgcatc
accatggaaggatggaccgatgtactataccatccccacatcattccaaacccttataat
tttctttcttctgtaaaccaaacatatgtgaaccaaaataagatggaatttgccaaagaa
agagagcgagtggagaagaggcaggagttcttgaagctccgcagacagcagcagattgag
agagagctcactggatacttggaatggatatgcaaggcagaggaggtgttgctggcagag
gaggatcagaatgctgaggagaaatcccctctggatggtgcgtggtacaggaggaaacag
aacaacccagtgctgaaaagaacaaagaccaggaagggtcgaaatgacctcattagtgct
gaagagggagaggaacatttcacagacatctcctctgttgcaccacctggatcacctttt
gctcgagctagcctgaagagcagtaagaatgatagctcctcatactttcatcgaaaagaa
aagaggatacgctttttcatccggcggatggtgaaggcacagagtttttactggattgtt
ctgtgtttggtgggattgaacacgatgtgtgtggccattgtccattacgaccagcctgag
tggctcaccaaggccctgtacctggcagagtttgtattcctgggtctgtttctgacagag
atgaccctgaagatgtacggcctggggcccagaaactactttcactcctcgttcaactgt
tttgactttggggtaattgtgggaagtatatttgaggtggtgtgggcagcgattcagcct
ggtgcatcttttgggatcagtgttctgagagccctgcgcctgctccgtatttttaaagta
accaagtattggaactctttgcggaatctagtggtttcactgttaaactctatgaagtcc
atcatcagtttgctcttcctcctcttcctcttcatcgtggtatttgccctgctaggcatg
caactcttcgggggccagtttaattttgaagatgaaactcccactacaaactttgacagc
ttccctgcagccataatgacagtcttccagattttgacaggagaggattggaatgcagtg
atgtatcatgggatagagtcccagggtggtgtccggggtggaatgttctcctcggtctac
ttcattgttcttacactgtttggaaactacactcttctcaatgtattcttggccatcgct
gtggataaccttgccaatgcgcaggagctaacaaaggatgaagaggaacaagaggaggca
gcgaagaaaagcatggctcttcagaaggctatggaggtgaaggaggtcagcccaatgtct
gctgccaacatctcaatagcagctaaagaacagcagaggtcactgcagaagatgtcaata
tgggagcagcgcaccaaccagctgcgcagacacaacctgcgcaacagcagcgaggccctt
tacaacgaactagagcctgaagagcgtctgcgcgtgtcttcggcgctccatctgcggccc
gacatgaaggcccaccatgatcggccactggtagtggagcaccgagacgatactgtggac
aattctaggactgacagagatggagacactccagactgtcagccatcctccggccaccca
aggaagcaccatcgatgtcgaggagagaacggagatgcaggagaggggaggcaccataga
caccacagccaaaacatagagcaccagggcagcctggagcacagcagcaatcaggatgga
ggacacactaaccaccacatggctggttctcctgaggagggcatagggatggaggagaga
gaacacagacaccaccattctcgccgatccagagaggtcaacgggaatggcaacggcaca
atcggtaatggaggcagaggcgagggtaggatacgaggtcacagagaaggcgaaggagaa
aatggagagaggagaagacaccggccacgtgttaaagcccagtccacactggatggagaa
gaatgcagggagaacggtggaaaacacaggggcagaccaacaggaacagacagcctagcc
accagccctctccagtctccaactgaagagaagccagaagacaaagataatctaaaaaac
agcaccagagtgggcccaactggagtcaacatccctgtcaccataactgacccaccagga
gagactacagtcattcccatgaacaacattgatggtgacagtctactgctgaacgaggaa
aagaaggatcttgatgagctaaatcagaatgcgcccaaacacattctgccatacagctcc
atgtttgtgttcggtccaactaacccagtgagacggctgtgtcattatgtggtgaaccta
cggtattttgagatgtgtatcctcacagtcatcaccatgagcagcatcgccctcgctgct
gaagaccctgtgcaggccaatgccccgcgcaatgatgtgctgaaatacctagattacgtc
ttcactggtgtgttcacatttgagatggttataaagatgatcgatctcgggctactgttg
catcctgggtcttacttcagggacccgtggaacatactggacttcatcgtagtcaccggt
gctctggtggccttcgcctgctcgagcttcatgggatcgcagcaaagcgtgaccagagga
actaaaggcaaggacatcaacactatcaagtccctaagggtccttcgagtcctgaggccc
ttgaagaccattaaacgtttgcctaaactcaaggctgtgtttgactgcgtggtgaactct
ctgaagaatgtgctcaacatcctcatcgtttacatcctcttcatgttcatcttcgcggtt
attgctgtgcagcttttcaaggggaaattttttcactgcaccgacgaatccaaagccctg
gagaaggactgcaggggtcagttcctggagtttggcagtgatggactggccttgacactg
ccgcgcgagtggaagaagtatgatttccattatgacaacgtcctgtgggcctttttgacc
ctgttcactgtctctacaggagagggttggccaacagtgctgaaacactctgttgatgcc
acgtatgaagaccagggtcccagtccgggttaccgcatggaaacctccatcttttacgta
gtctacttcattgtcttccccttcttctttgtcaacatctttgtggctttgatcatcatc
acgttccaggagcagggagataaagccatgtcagagtgcagcttggaaaagaatgagcga
gcttgtatcgactttgccatcaatgccaaacctctgacacgctacatgccgcaggacaag
cagtcttaccagtacaagatatggaagtttgtggtgtccactccgtttgagtactccatc
ctgaccatgatcgccatcaacacagtggtcctcatgatgaagttccatgatgctcctaat
ccatatgaggacatgttgaagtggctgaacatcatcttcacggctctcttcacgctggag
tgcattctcaaggtcattgccttcggccctctggataagaggattaatctgagtttcctg
agactcttccgggccgcccgtctcattaaactcttacggcagggctacaccattcgcatc
ctgctctggacctttgttcagtcctttaaggctctgccgtatgtgtgtctcctcattgca
atgctcttcttcatatacgccatcattgggatgcaggtgtttggtaatatcatgttgtcc
gaggagtcggctatcaacatccataataacttccaaacattttttcaggccctcatgttg
ttgttcaggagtgctacaggggagacttggcatgaaattatgctgtcttgtctgagtgaa
aggccatgtgaccgtgactctggatatactggaaaagagtgtggcagtgactttgcttac
ttctactttgtctctttcatcttcctttgttccttcctgatgctgaatctgttcgtcgct
gtcatcatggataactttgagtacctaacacgtgacgcttctattctcgggcctcatcac
ctcgacgagttcatccgtgtttgggctgagtacgaccctgccgcctgtggacgcatgtcc
tacctcgaaatgtacgagatgcttcgccacatgtcccctccactaggtttgggaaagaaa
tgtcctccaagaatcgcctataagcggttggtgaggatgaacatgcccatagctgaagat
agtacggttcactttacctccactttaatggctctcatccggaccgccctggagattaaa
ctggcatcaggagttctggctcagcggctttgtgatgctgaattaaggaaggaaataaat
aaaatttggactaacttgtcttcaaaaacagtggacctgctggtgacacctcataaacat
aatgaattgactgttgggaaggtctatgctgctctcatgattttcgactattataagcag
aaccgagccaaaagactccaaccgcagcaggctgcaccaggcacacagagtaaagttggg
gttctcttcagaccaatgcttcctctcacacacttgcacagtcaggagccactagtgcta
aaagccccgccctcttctcaattacataccacaccacagccagatgccccgcccacatcc
tttcacctgaccaatggggatgcagtacaaagccagagcagtgccatgaaaacgtctcct
tcaggagacatacctcaggaagtcacacaggaagcaaacagaaggcctgtccaaaggggc
caatcggtagacgtgccaaacacatacagatctcaggaattagttgagatgactgacatg
gagaatgactctgatgtgggcgggtatcctgtgctggagggtcacggcagagctgcctcc
atgcccagactcaacgctggctttcagcggagccacttacgccacaccgccggaacgtat
ctagcacctatcgcagacgtgagtcccatgcggcggtctgcgtcctcgttgactcctcag
agaggggtgcgagaggtcaatctgagcgattatgacctggagaggcccaagatggccccg
ggccagaccctcactcaggagagagagagggacagagctcatcatcatcaccatcatcat
caccgctgccagcggcgcagagacaagaagcacaaatcgctggatcgagtcatcagcgag
gagcagcctccccatgcagcagatccaaacactgagtcactgcctagggaacgagcacgg
gagcgagaccgtggccgttcccatgagaggaagcaccattcatcctcagcagtggaaagg
aagcagcgatactactcttgcgaccgctacggcagccatgagcaaggccacagcgtgtcc
gctgggcccagcagatccacatcgccaggagaaccccatgacccaaacaggcttaaacag
ggagttagcacagctaaaggaacttcagtcgttcatacctcaggcaccagcacaccctgc
cgcgggcgtagacagctcccacaaacgccccttaccgctgccttctttttcagcagtcgt
ggttctggaagtgttttcccattcattgtcttcatgggaatttcaagcaaaacaatatac
aaaaatacagttttctga
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