Sinocyclocheilus grahami (golden-line barbel): 107595780
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Entry
107595780 CDS
T04918
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit-like
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04010
MAPK signaling pathway
sgh04210
Apoptosis
sgh04218
Cellular senescence
sgh04620
Toll-like receptor signaling pathway
sgh04621
NOD-like receptor signaling pathway
sgh04622
RIG-I-like receptor signaling pathway
sgh04623
Cytosolic DNA-sensing pathway
sgh04625
C-type lectin receptor signaling pathway
sgh04920
Adipocytokine signaling pathway
sgh05132
Salmonella infection
sgh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107595780
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
107595780
04218 Cellular senescence
107595780
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
107595780
04621 NOD-like receptor signaling pathway
107595780
04622 RIG-I-like receptor signaling pathway
107595780
04623 Cytosolic DNA-sensing pathway
107595780
04625 C-type lectin receptor signaling pathway
107595780
09152 Endocrine system
04920 Adipocytokine signaling pathway
107595780
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
107595780
09171 Infectious disease: bacterial
05132 Salmonella infection
107595780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgh03000
]
107595780
Transcription factors [BR:
sgh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
107595780
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
Ank
RHD_dimer
Ank_3
Ank_5
Ank_4
Death
Motif
Other DBs
NCBI-GeneID:
107595780
NCBI-ProteinID:
XP_016141791
LinkDB
All DBs
Position
Unknown
AA seq
909 aa
AA seq
DB search
MAGEDPYHGVYMEPIDPFRDDTIWMTMDPTAFPGIHNNNVMRTVDGPYLRIVEQPKQRGF
RFRYGCEGPSHGGLPGASSEKNRKSYPQVKVCNYQGAARVVVQLVTNTAEPHLHAHSLVG
KQCDKGICIVELLPKDSSISFPNLGILHVTKKNVSKVLEERMIEAYRMGYNYGIFINPEI
DVLQGEVRMPRELTDAERNLISSASIHQSKEMDLSVVRLMFTAFLPDSDGGFSRRLEPVI
SDPIFDSKAPNASNLKIVRMDRTAGCVTGGEEVYLLCDKVQKGQKFAIVFKTPKYRDQNL
QKPISVFVQLKRKSDNETSEPKPFTYHPQIIDKEEVQRKRQKTLPNFQDYSGAGGGAGGM
FRGGGGGSTAGGGPSGGGVGGHFFQGYQTYNNFGSGYNFSSGVGGGGTTIKHAYQEPVED
SDEDSDSDTDDDPAAGGVVRICAQPEPVGLGVESEDTEPTENLELNTTGCVLEPHLAELA
GRQAQALFHYAVSGDARMLLAPQRPLMTTQDENGDTGLHLGVIHSQTDAVRNLAQVISGL
PGEDIINMRNDLYQTPLHLAVLTQQKEAVEALLEADVDITLTDRHGNTALHLAAQQKEDN
MLRLLLKYKPVVQLTSIPNTAGLCPLHLAVQANGLSCVRALLDGGADVDVQEITCGHTAL
HLATELGNLSLAGCLLLEGNAYVDSVTYNGSTPLHVAAGRDSTKLCALLMAAGADPHKEN
FEPLFFKEDELCGTCEEEEEEEDEGYIPGTTPLNMATSPEVYDILNGEEYQLTTTVVPPQ
GDMKSLSSDTKQELCQALEGQTGGWESLAHALGLGILTSAFRLSTCPARKLLDSYEVSGG
TVRELVEGLKHVGNSSAVSLLQAMCKEPEAVHTTPQLTGPGLCKSIQGLTLGPHQEESGI
CDSGVETSF
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggctggagaggatccataccatggtgtgtacatggaacctattgacccgttcagagac
gacacaatatggatgaccatggacccgacagcatttccgggcatccacaacaataatgta
atgaggactgtcgacggaccttatctgcgaattgtcgaacaaccaaaacagaggggcttc
aggttccgctatggatgtgagggcccctcccacggaggactcccaggggcctccagtgag
aagaacaggaagtcttacccacaagtgaaggtctgtaactaccagggtgcagctcgagtg
gtagttcagctggtgaccaacaccgcggagccccatcttcatgctcacagcttggtgggc
aaacagtgtgataaaggaatctgcattgtcgaattgctgcccaaagattcaagcatcagt
tttcctaacttgggcattttgcacgtgacaaagaagaacgtaagcaaagttttggaagag
aggatgatcgaggcctacaggatgggatataactacggcatattcatcaatcctgagatt
gatgtcctacaaggagaggttcgcatgcccagagaactcacagatgctgagaggaacctg
attagcagtgcatctattcatcagtcaaaggagatggatctgagcgtggtacggctcatg
ttcacagccttcctgcccgacagtgatggagggttctcccgcaggctggaaccagtcatt
tcagaccccatctttgacagcaaggccccaaatgcctccaatctgaagatagtgcggatg
gatcggaccgccggctgtgtgacgggaggagaggaggtctatctgctgtgtgataaagtc
cagaaaggtcagaaatttgccattgtcttcaagacgcctaaatatcgggaccagaacctc
cagaagcccatctctgtgtttgtgcagctaaaaagaaagtcagacaatgaaacgagtgaa
cccaagcctttcacctaccatccacagattatagacaaagaagaagtccaacgaaagaga
cagaagacactgccaaacttccaggactacagtggagcaggaggcggagctgggggcatg
tttagaggaggagggggtgggtctacagcagggggcggtcccagtggaggaggagtggga
ggacatttcttccagggatatcaaacctataacaattttgggtctggatacaacttctcc
tcaggcgtgggaggaggcgggaccaccatcaagcatgcgtatcaagaaccagtggaagac
agtgatgaggacagtgacagtgataccgatgatgatccggcagcaggtggggtggtgcga
atctgtgcccagcctgaacctgtcggtttgggagtggaaagtgaggacacagagcctaca
gaaaatctggagttaaacaccacaggctgtgtgttagagccgcatttggctgagctagct
ggaagacaggctcaagctctctttcattacgcagtaagcggtgatgctagaatgcttctg
gctccacagcgccccctcatgaccactcaagatgagaacggagacacgggtttacatttg
ggagtgatccatagtcagacagatgccgtgcgaaatctagcacaagtcatctcgggtctc
cccggagaggacataatcaacatgaggaatgatctgtaccagactcctttgcacctagca
gtgttgacacagcaaaaagaggcggtcgaggccttgttggaggccgatgtggacatcacg
ctcacagatcgccatggaaacacggcacttcacctggcggctcagcagaaagaggacaac
atgctgcgattgctgctaaagtacaaaccagtggtgcaattaaccagcatcccgaacaca
gcaggtctctgtccgcttcacctggctgtacaagcaaacggtttgagttgtgtgcgagcc
ttgcttgatggcggggcagatgtggatgttcaggagatcacgtgtggccacacagcactt
cacctggccacagagctgggaaacctttcccttgccggctgcctcctgctggagggtaat
gcatatgtagacagcgtcacctataatggttcaactcctctgcacgttgctgcaggacgt
gactcaaccaaactgtgcgcgctcctgatggctgcaggagcagatcctcataaagaaaac
tttgaaccactgttcttcaaagaagatgagttgtgtggtacatgtgaggaggaggaggag
gaggaagatgaaggctatattcctgggacaacccctctgaacatggcaacctccccagag
gtgtatgatattcttaatggagaagagtatcagctcaccaccactgttgttccaccacaa
ggtgacatgaagagcttgagctctgacacaaagcaggagctgtgccaggccctggaagga
cagacgggaggctgggagagtctggctcatgctctggggcttggcatcctgaccagtgcc
ttcagactcagcacctgccctgctagaaagctgctggacagctatgaggtgtctggagga
acggtgcgtgagctggttgagggactgaagcatgttgggaacagcagtgctgtcagttta
ctccaggctatgtgcaaggagcctgaagctgtccacaccacgcctcagctcacaggtcca
gggctctgtaagtccattcagggtttgacactgggcccccatcaggaagagagtgggata
tgcgacagcggggtggaaacctctttctag
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