Sinocyclocheilus grahami (golden-line barbel): 107595848
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Entry
107595848 CDS
T04918
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107595848
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgh03019
]
107595848
03110 Chaperones and folding catalysts [BR:
sgh03110
]
107595848
03029 Mitochondrial biogenesis [BR:
sgh03029
]
107595848
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sgh04147
]
107595848
Enzymes [BR:
sgh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
107595848
Messenger RNA biogenesis [BR:
sgh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
107595848
Chaperones and folding catalysts [BR:
sgh03110
]
Heat shock proteins
HSP60 / Chaperonin
107595848
Mitochondrial biogenesis [BR:
sgh03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
107595848
Exosome [BR:
sgh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107595848
Exosomal proteins of other body fluids (saliva and urine)
107595848
Exosomal proteins of breast cancer cells
107595848
Exosomal proteins of colorectal cancer cells
107595848
Exosomal proteins of bladder cancer cells
107595848
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
107595848
NCBI-ProteinID:
XP_016141913
UniProt:
A0A672SXE0
LinkDB
All DBs
Position
Unknown
AA seq
575 aa
AA seq
DB search
MLRLPSVMKQMRPVCRALAPHLTRAYAKDVKFGADARALMLQGVDLLADVVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKSIDLKDRYKNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAVAKEGFDSISKGANPVEIRRGVMMAVEEIINELKKLSKPVTTPEEIAQVATISANGDT
EVGTIISNAMKKVGRKGVITVKDGKTLHDELEIIEGMRFDRGYISPYFINTAKGQKCEFQ
DAYLLLSEKKISSVQSIVPALEIANQHRKPLVIIAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLQDMAISTGGTVFGGEAVGLAIEDIQIHDFGRVGEVIVTKDDTMLLKG
RGDPAAIEKRVNEIAELLESTSSDYEKEKLNERLAKLSDGVAVIKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVPGGGCALLRCIPALDNIKPANNDQKIGIDIIRRSLRIPAVTIA
KNAGVEGSLVVEKILQSAPEIGYDAMNGEYVNMVERGIIDPTKVVRTALLDAAGVASLLA
TAEAVVTEIPKEEKDMPAGGMGGMGGMGGMGGMGF
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgtttacccagtgtgatgaaacagatgaggccagtgtgcagggcgctggcccca
cacctgacccgtgcgtatgccaaggacgtcaagtttggagcagatgcccgggcactgatg
ctccaaggcgttgacctgctggctgatgttgtggccgtcaccatgggaccaaagggtcgc
accgttatcattgaacagagctggggcagccccaaagtcaccaaagatggtgtcacagtt
gccaaaagtatcgacctgaaggataggtataagaacattggggcgaagctggtacaggat
gtggccaacaacactaacgaggaggctggagacggcaccacgactgccactgttttggcc
cgtgctgttgccaaggagggatttgactccatcagcaaaggcgccaaccctgtggagatc
cgtagaggagtcatgatggcagtggaagaaatcatcaatgaactcaagaaactctccaag
ccggtcacaacaccagaggaaattgctcaggtggccactatttctgccaatggagacact
gaagttggtaccatcatctccaatgctatgaagaaagtgggccgcaagggtgttattaca
gtgaaggatggtaaaaccctacatgatgagcttgaaatcattgagggcatgaggttcgac
cgtggctacatttctccatacttcatcaacacagccaaaggccagaagtgtgagttccag
gatgcttacttgcttctgagtgagaagaagatctcaagtgtacagagcatcgtgccagca
ctggaaattgccaaccagcatcgcaagcctctggtcatcattgctgaagatgtggacgga
gaggcactcagcactctggtcctcaacaggttgaaggttggactccaggtcgttgcagtc
aaggctccaggattcggtgacaacaggaaaaaccagctgcaggatatggccatttccact
ggaggcacggtgtttggtggtgaggctgtgggtctggccattgaggatatccagatacat
gactttggcagagtcggagaggttatcgtgacaaaggatgacacaatgctcctcaaaggc
cgcggtgatccagcagccattgaaaagcgtgtgaatgagatcgctgaactgctggagagc
acaagcagtgactacgagaaggagaaactcaacgagcgtctggccaagctctctgatgga
gtggctgtgattaaggttggaggtacaagtgacgttgaagtgaatgagaagaaagaccgt
gtcactgatgcactgaacgccactcgagctgctgttgaggagggaatcgttcctggagga
ggatgtgccctgctacgctgtatcccagccctggacaacatcaaaccagccaataatgat
caaaagattgggatcgacattattcgcagatcgcttcgtattcctgcagtgactattgcc
aagaatgcaggagttgagggctctctggtggtggagaagatcttgcagagcgctccagag
attggatatgatgctatgaatggagaatatgtcaacatggtcgaaagaggcattattgac
cccacaaaggtcgtgaggactgcattgctagatgctgcaggcgttgcatctctgctggct
actgctgaagccgttgtcactgagataccaaaggaggagaaggacatgccggctggagga
atgggtggaatgggaggcatgggaggtatgggtggcatgggattctaa
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