Sinocyclocheilus grahami (golden-line barbel): 107595873
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Entry
107595873 CDS
T04918
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sgh01002
]
107595873
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sgh04121
]
107595873
Enzymes [BR:
sgh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107595873
Peptidases and inhibitors [BR:
sgh01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107595873
Ubiquitin system [BR:
sgh04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107595873
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
Dsc3_N
DUF2014
Motif
Other DBs
NCBI-GeneID:
107595873
NCBI-ProteinID:
XP_016141945
LinkDB
All DBs
Position
Unknown
AA seq
2540 aa
AA seq
DB search
MTATTRGSPVGGNDGQGQAPDGQSQPPLPQNQTSSPNSSNENSPVSPPDDQGQGDSPTPL
EEEEPAFPHTELAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLCKKGLDVKCEACQRFF
RDGLTISFTKILTDEAVSGWKFEIHRCIINNAHRLVELCVSKLSQDWFPLLELLAMATNP
HCKFHIYNGTRPSETVPAGVQLAEDELFARPPDPRSPKGWLVDLINKFGTLNGFQILHDR
SMSGQALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPIIEMVPQFLENLTDEELKKEAKN
EAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNK
VISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFV
IKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKESWTNAS
KKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYSC
SQDRDTQKMQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLSQTQRSPHVFYRH
DLINQLQHNHALVTLVAENLSAYMENMRQFSKEHTDFDPQTVRPGSRYSHVQEVQERLNF
LRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYSKLMGDEPDLDPDINKDFF
ENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLELIGLDYLWRVVIQ
GSDDIASRAIDLLKEIYTNLGPKLQANQVVIHEDFIQSCFDRLKASYDTLCVLDGDKDSI
NCARQEAIRMVRVLTVLREYITECDSDYHEERTILPMSRAFRGKHITLVVRFPNQGRQVD
DLDIWSHTNDTIGSVRRCILNRIKANSTHTKIELFIGGEIIDPADDRKLIGQLNLKDKTL
ITAKLTQVSANMPSSPDSSSDSSTGSPGNHGNHFSDGPNPEVESCLPGVVSTLPFRHTID
PNCLFIYTLNILKGECIYVTVVYALLMPASGTLGEDASDFQYNFLKSGGLPLVLSMLTRN
NFLPNADMETRRGAYLNALKIAKLLLTAVGFGHVKSVAEACQPVVEGTIPVSPINQTTHD
QALVLQNALQNIPNPSAECMLRNVAIRLAQQISDENFFQASKYIPDICVIRAVQKIVWAS
GCGSVQHVFSSNEEISKIYEKTNAGNEPDTEDEQVCCEALEVMTLCFALMPTALDALSKE
KAWQTFIIDLLLHCQSKSVRQMAQEQFFLMATRCCMGHRPLLFFITLLFTVLGSTAKERA
KHAADYFTLLRHLLNYAYNSNINLPNAEVLLNNEIDWLKRIRDEVKRTGEPGVEETILEG
HIGVTKELLAFQTPEKKFYIGCEKGGASLIKELMDDFLFPASNVYLQYMKSGEFPTEQAI
PVCSTPATINAGFELLVALAVGCVRNLKQIVDTLTDMYYLGCEPLTEWEYLPPVGPRPTK
GFVGLKNAGATCYMNSVIQQLYMIPPIRNGILAIEGTGSDVDDDMSGDEKQDNESNVDPR
DEVFGYQHQFEDKPSLGKSEDRKEYNIGVLRQLQVIFGHLAASRLQYYVPRGFWKQFRLW
GEPVNLREQHDALEFFNSLVDSLDESLKALGHPAMLSKVLGGSFADQKICQGCPHRYECE
ESFTTLNVDIRNHQNLIDSMEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKKFPPVLA
IQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGSDVHPENQQEVIQQNEP
SEPEPPCSSRYRLVGVLVHSGQASGGHYYSYIIQRNGSGCEGERNRWYKFDDGDVTECKM
DDDEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDTLDKDSELVKYIT
ELTVTSKPYQVKMPSAIERSVRKQNVQFMHNRMQYSLEYFQFIRKLLTCNSVYLNSPPGQ
DHLLPEAEEMAMISIQLAARFLFSTGFHTKKIVRGPASDWYDALCILLRHSKNVRYWFAQ
NVLFAYPNRFSEYLLECPSAEVRGAFSKLIVFIAHFSLQDGPCPSPIASPGPSSQGCDNL
SLSEHLFRAILNLLRREVSEHGRHLQQYFSLFVMYANLGLAEKTQLLKLGVPATFMLVAL
DEGPGPPIKYQYAELGKLYTVVSQLVRCCDVTSRMQSSINGNPPLPNPYGDPNITAPIMP
LQQVVVDILFVRTSYVKKIIEDCSNSEDTIKLLRFCCWENPQFSSTVLSELLWQVAYSYT
YELRPYLDLLLQILFIEDSWQTHRIHNVLKGIPDDRDGLFDTIQRSKNHYQKRAYQCIKC
MVALFSNCSVAYQILQSNGDLKRKWTWAVEWLGDELERRPYTGNTQYTYNNWSPPVQSNE
TSNGYFLERSHSARMTLAKACELCPEECHLTKHEGVSEEDAGRNPSSTQQLLPGEVTGQQ
QHTEPDEQEALDEQDTSPPEDTALYPHSPGTKFQQQNNLPHTQPYTGPAAQHVNNPQRPG
PRAQENWEPPEEVPPSQTKD
NT seq
7623 nt
NT seq
+upstream
nt +downstream
nt
atgacggccacgacccgtggctcccctgtgggagggaatgatggtcagggccaggctccg
gatggccagtcccagccacccctgccccagaaccagacatcctctcccaactcatccaac
gagaactccccagtgagcccaccagatgaccagggtcagggggacagtcccactcccctg
gaggaggaggagccagctttcccccacactgaactggccaagctggatgacatgatcaac
agacctcgctgggtcgttccagttttaccaaagggtgaattagaagttcttcttgaagct
gctatagatctttgtaaaaaaggacttgatgtcaagtgtgaagcatgccagaggtttttc
agagatggcttgacaatatcctttacgaaaatactgacagatgaggctgttagtggatgg
aaatttgagatccatcggtgcatcattaataacgcccaccgactggtggagctgtgtgtg
agcaagctttctcaggactggttccctctgctagaactcttggcgatggccaccaacccc
cactgtaagttccacatctacaatggtactcgaccctctgagacggtgcctgctggggtt
cagctagctgaggatgagctttttgcccgtccacctgaccctcgctctcctaagggctgg
ttggtggatttaataaacaaatttggcacgttaaacgggtttcaaattctgcatgatcga
tccatgagtggccaagctctgaatgttcagatcattgctgcactcattaagccttttgga
cagtgctatgagtttctcactttgcacacagtgaagaagtacttccttcccatcatagaa
atggttccccagtttctagaaaacctcacagatgaggaattgaaaaaggaagcaaagaac
gaagccaaaaacgatgccctgtctatgataatcaaatctttgaagaacctggcttctcga
gtaccaggacaagaggaaacagtgaagaatttagagatatttcggttaaaaatgattctt
aggttattgcagatttcttcttttaatggcaaaatgaatgcactaaatgaagtgaacaag
gtgatttcaagtgtttcctactacacacatcgtcatggcaatcctgaagaggaagagtgg
ctgacagcagaacgcatggcagaatggattcagcagaacaatattttgtctattgtgctg
cgagacagccttcatcagccacaatatgtggagaaactggagaagatcctgcgatttgtc
atcaaagaaaaggccctaacgcttcaggacctggacaacatctgggccgctcaagcaggg
aaacatgaggctattgtcaagaacgttcatgatcttcttgcaaagctggcatgggatttc
tcacctgaacagctggaccatctctttgactgcttcaaggagagctggactaatgcaagt
aaaaagcagagagagaagttactggaattgattcgtcgactggcagaggatgacaaggat
ggtgtgatggctcacaaagtactcaatctactgtggaatttggcccatagtgatgatgtt
cctgtggatatcatggaccaggcccttagtgctcatattaagattttggactatagctgt
tcccaggacagggacacacagaagatgcagtggatagaccgattcattgaagaattaaga
actaatgacaaatgggtgattcctgcactgaagcaaatacgggagatctgtagcctcttt
ggagaagccccccagaatttaagtcaaacgcagcggagcccacatgtcttctatcgacat
gacctaatcaaccaactgcagcacaaccatgcactggtcactcttgtagcagagaacctg
tctgcatacatggagaatatgaggcagttctcgaaagagcacacagactttgatccccag
acggttaggccaggaagtcggtatagtcatgttcaggaggtccaggagcggctcaatttc
ttgaggttcttactgaaagatgggcaactctggctgtgtgcacctcaggctaagcagatc
tggaagtgcctggctgagaacgcagtgttcttgtgtgatcgggaggcctgcttcaaatgg
tactccaaactcatgggggatgaacccgaccttgaccctgacatcaacaaggactttttt
gagaacaacgtactgcagcttgacccctcgctgctgacagagaacgggatgaaatgcttt
gaacgattcttcaaggcagtcaactgcagggagggcaaactggtggcaaaacgccgggca
tacatgatggatgacttggagctgatagggctggattacctgtggagggttgtgattcaa
ggaagtgatgatattgctagccgagcaattgacttgcttaaagagatttatacaaacctc
ggaccaaaattacaagccaatcaggtagtgatccatgaggattttattcagtcttgcttt
gaccggctcaaagcctcctatgacactctgtgtgtgctggatggagataaagacagcatt
aactgtgccagacaggaggccatccgcatggtgagagtactgacggtgctcagggagtat
ataaccgagtgtgacagtgactaccacgaggagaggactatcctgcccatgtccagggct
ttccgaggaaagcatatcacactagttgtgcgtttcccaaaccaaggccgacaggttgat
gatctggatatttggtcacataccaatgacacaattggctctgtgcgacgctgcattctg
aatcgaataaaggccaacagcacacacaccaagattgagctgttcatcgggggagagatc
attgacccagcagatgacaggaagctaatcgggcagctaaacctcaaagataaaactctc
atcacagccaagctcacccaggttagcgccaatatgccttccagtccagacagctcctca
gactcctccactggttcccctgggaaccatggcaatcacttcagtgatgggccaaaccct
gaagtggagagctgtcttcccggcgtggtgagcactttgccattcaggcacacaattgat
ccaaactgtctatttatttacacattgaatatattgaaaggggagtgcatctatgttaca
gtggtgtacgccttgctcatgcctgccagtgggacattgggcgaggatgctagtgacttc
cagtacaacttcttgaagagtggtggcctgcccctggttttgagcatgctgaccagaaat
aacttcctgccaaatgctgacatggagacccggcggggagcttatctcaacgcactaaaa
atagccaaactgctgctcacagctgtaggctttggccatgtgaagtctgtggcggaggcc
tgccagcctgtggtggaggggactatccctgtatcgcctatcaaccagaccacacatgac
caggctctagtgctacagaatgccttgcagaatatccccaacccctccgccgagtgcatg
ctgcggaacgtggccatccgcctcgcccaacagatctcagatgagaacttcttccaggcc
tcaaagtacatcccagatatctgtgtcattcgagcggttcagaagatagtctgggcttct
ggctgtggctctgttcagcacgtcttcagttctaatgaggagatcagcaagatctacgag
aagacaaatgctggcaatgagccggatacagaagatgagcaggtgtgctgtgaagctctg
gaggtcatgaccctgtgtttcgcccttatgcccactgcactagatgcacttagcaaagaa
aaggcctggcagaccttcattatagatctgctgctgcactgccagagcaagtctgttcgt
caaatggcccaagaacagttcttccttatggccacccgatgttgtatgggccataggcct
cttctcttcttcatcaccctcctcttcacagttttaggtagcactgcaaaagagcgggca
aagcatgctgctgattacttcactcttcttaggcacttactcaactatgcatataacagc
aacattaatcttcctaatgcagaagttctcttaaacaatgagattgactggttaaagcgc
atccgggatgaagtgaagaggaccggagagcctggggttgaggagacaattttggaaggt
catattggtgtcacaaaagagctactagcattccagaccccagagaagaagttctacatt
ggctgtgaaaaaggaggcgctagtcttatcaaggagttaatggatgacttcctgttccca
gcatctaatgtgtacctgcaatatatgaagagtggagaattccccactgagcaggccata
cctgtgtgtagcaccccagccacaatcaatgccggctttgaactgctggttgcacttgct
gtcggatgtgtgcgaaatctcaagcagattgtggacacactaactgatatgtactattta
ggttgtgaaccacttacagaatgggagtatttgccgccagttggcccaaggcccactaag
gggtttgtgggtctgaaaaatgcaggtgcgacttgctacatgaactcagtgatccagcag
ctctacatgattcctcctatcaggaatggcatcctggccattgaaggcacgggcagtgat
gtggatgatgatatgtctggagacgagaagcaagataatgagagtaatgtggatccacgg
gatgaggtgtttggctatcagcaccagtttgaagacaaaccttctctcggtaagtcggaa
gacaggaaggaatacaacattggggttcttcggcagttgcaggtcatttttggacacttg
gctgcctccaggttgcaatattacgtgcctaggggattctggaagcaatttcggttgtgg
ggtgaaccagtcaatctgagggaacagcatgatgccctggagttctttaactcactggta
gacagtctagacgagtctttgaaagcattgggtcaccctgccatgctgagtaaagtactg
ggtggctcttttgctgaccagaaaatatgtcagggctgtcctcacagatatgaatgtgag
gaatcgtttacgacgttgaatgtagatatcagaaaccatcaaaatctaattgattctatg
gagcagtacgtgaaaggagacttgctcgagggtgcaaatgcctatcactgtgaaaaatgc
aacaagaaggtggacacagtgaaacgtttactcattaagaagtttcctccggtgttggcc
atccagctgaaacgctttgattatgactgggaacgagagtgtgccatcaagttcaatgat
tactttgagttcccacgggagttagacatggagccctatacagtagctggagtagctaag
ctggaggggtctgatgtgcacccagagaaccagcaggaggtgatccagcagaatgagccg
tcggagccggaacccccctgcagctctcgctatcgtttggtgggagttctggtccactca
ggccaggctagtggaggtcattattactcctacatcattcagaggaacggcagtggttgt
gagggagaaaggaaccgttggtacaagtttgacgatggtgacgtcactgaatgcaagatg
gacgatgacgaggagatgaagaaccagtgctttggtggagagtacatgggcgaggtcttc
gaccacatgatgaaacgcatgtcctataggcgacagaagcgctggtggaacgcctacatt
ctcttttatgagcgaatggacacattagacaaggatagcgagctagttaaatacatcact
gagctgacagtgaccagcaaaccttaccaggtgaagatgccctctgctattgaacgcagt
gtgcgcaaacaaaatgtgcagtttatgcacaaccgtatgcagtacagcttggagtacttc
cagttcatcaggaaattgctgacctgtaacagtgtctacttgaactcaccgccaggtcaa
gaccaccttttgcctgaagcagaagaaatggctatgattagtatacagctcgcggctaga
tttctcttcagcactgggttccacacaaagaaaatcgtccgtggccctgctagtgactgg
tatgatgctctgtgcatcttgctacgacacagtaagaatgtgcgttactggtttgcacag
aacgtcctctttgcatatccgaaccgcttctccgagtacctgcttgaatgtcccagtgca
gaggttcgaggggccttctccaaactcattgtatttattgcacatttctccctgcaagat
ggaccctgcccttcaccgattgcctcacctggaccttcaagtcagggctgtgataatttg
agtttgagtgagcacttgttccgtgccatacttaatctgctgagaagggaagtgtctgag
catggccgtcacctgcagcagtacttcagccttttcgtcatgtatgccaaccttggcttg
gcagagaagacgcagctgttgaagctcggggtaccagctaccttcatgcttgtggctttg
gatgagggccccggccctcctattaagtaccagtatgctgagctcggaaagctctatact
gtcgtctcacagctggttcgctgctgtgatgtgacgtcacgtatgcagtcctcaatcaac
ggaaaccctcccctgccaaacccatatggtgaccccaacatcaccgcacccatcatgcct
ctgcagcaggtggtggtggacatcctgtttgtgcgtaccagttatgtgaagaagattatc
gaggactgcagtaactcagaggacactatcaaactgctgagattctgctgttgggaaaac
cctcagttttcctccactgtgctgagtgaactactgtggcaggtggcatattcatacacg
tatgagttaaggccttacctggacttgctccttcagatcttgtttattgaagactcatgg
cagactcacaggatccacaatgtgctgaagggaatccctgatgatcgtgatgggcttttt
gacaccattcagcgctccaaaaatcactaccaaaagagagcttatcagtgtatcaaatgc
atggtggctcttttcagcaactgctcagtggcctatcagattctccagagtaatggtgat
ttaaagaggaagtggacctgggcagtggagtggctcggtgacgagctggaacgtagacca
tacactggcaatacccagtacacttataataactggtcccctcctgtccagagcaatgag
acttctaatggatactttctggagcgctctcacagtgcccgtatgactttagccaaggcc
tgtgagttgtgcccagaagagtgtcacttaacgaagcacgagggggtatctgaagaggac
gctggccggaatccgtcctcaacacaacaacttttgccaggggaagtgacaggccaacaa
cagcacaccgagcctgatgagcaggaggcccttgatgagcaggacacttctcctccagag
gacactgctctctaccctcactctccgggcacaaagtttcaacagcagaataacctcccg
catacgcagccgtacactggtcctgcagcacagcacgtcaacaaccctcagcgtccaggc
ccacgagcacaagagaactgggagccccctgaggaggtgccgcccagtcagactaaagac
taa
DBGET
integrated database retrieval system
