KEGG   Sinocyclocheilus grahami (golden-line barbel): 107596291
Entry
107596291         CDS       T04918                                 
Name
(RefSeq) RNA-binding protein MEX3D-like
  KO
K15686  RNA-binding protein MEX3 [EC:2.3.2.27]
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sgh03019]
    107596291
   04121 Ubiquitin system [BR:sgh04121]
    107596291
Enzymes [BR:sgh01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     107596291
Messenger RNA biogenesis [BR:sgh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     107596291
Ubiquitin system [BR:sgh04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    107596291
SSDB
Motif
Pfam: KH_1 KH_Vigilin zf-C3HC4_3 KH-I_KHDC4-BBP KH_BICC1_1st zf-C3HC4 KH_DEAH11_2nd RING_XB3-XBAT31 KH_2
Other DBs
NCBI-GeneID: 107596291
NCBI-ProteinID: XP_016142471
LinkDB
Position
Unknown
AA seq 465 aa
MLSNSKGLLVAHYTSGRPNKRDASPRWQLNHQGFRCKIKALRAKTNTYIKTPVRGEEPVF
IVTGRREDVEMAKREIISATEHFSMIRASRCKAGANGPGLSGSLPGPPNLPGQTTIQVRV
PYRVVGLVVGPKGATIKRIQQQTHTYIVTPSREKDPVFEVTGMPENVDRAREEIETHITL
RTGAFVDLQGDNDFHSNGTDVSLEGLGSLGLAGALWSRATHSAPPPPPQMHHSSRKMSSE
SFSATRRATDGGGSPTSPFSTSSAGGSFSFAGDSTPNLPATSEDLGFEFGAANIWAPFVN
GAKQQKQPPPPPVRRNSSGLSGGAVTPRLSPDPDHPVARRAQSDPLSALSWLQTGAGGSS
SGGSSTGYSSCSASSLPGGSPTDSEGGGSGVGIASTMLGRLKAGGLAGMVSRDCFVCCES
EVTAALVPCGHNLFCMDCAGQICQSQDPECPICHTPATQCIRIFS
NT seq 1398 nt   +upstreamnt  +downstreamnt
atgctttcaaactctaaagggcttctggttgcacactacacttcaggtcgtcctaataaa
cgggatgctagtccgcgttggcagctaaatcaccagggcttccgttgcaagatcaaagct
ttgcgtgcgaaaacaaacacctacatcaaaacccccgtgagaggagaagagcccgtgttc
atcgtgacgggccggcgcgaggacgtggaaatggccaaacgcgagatcatctcggcgacc
gagcacttctccatgatccgcgcctcgcgctgcaaagccggcgcaaacggccccggattg
agcggctcgcttcccggccctcccaacctccccggacaaaccaccatccaggtgcgcgtt
ccctaccgcgtcgtgggcctagtggtgggacccaagggagccacgatcaaacgcatccag
cagcagacgcacacctacatcgtgacgcccagccgcgagaaagaccctgtatttgaggtc
accggcatgcctgagaacgtggatcgcgcgcgagaagagatcgaaacgcacattacgttg
cgcaccggcgctttcgttgacctccaaggtgataacgacttccacagcaatgggacggat
gtgagtttagagggtctcgggtcgctcggtttggccggcgcgctttggtcgcgtgcgact
cactctgcgcctccacctccgccgcagatgcaccattcatcgcgcaaaatgtcgtccgaa
tcattctctgcgactcgacgggcgacagatggagggggaagcccaacaagcccatttagc
acgagcagcgccggcgggagcttctccttcgcaggcgattcaactccgaacttgcctgcg
acgtcagaggatttgggttttgaatttggtgctgcgaatatatgggcgccgtttgtgaac
ggtgcgaagcagcagaagcagccgccgccaccgccggtccgtcgcaacagcagtggcctc
agcggtggagccgtaaccccgcgcctctcacccgacccggatcacccggtcgcccgccgg
gcccaaagcgacccgctcagtgcgctctcctggctccagacgggcgccggaggcagtagc
agcggcggcagcagcaccggatactcgtcctgctcggcgtcgtcgctcccgggtggctcg
ccaactgattcagaaggcggcggcagtggagtgggaatcgcatccaccatgttgggacgc
ctcaaagcgggtggcctggctgggatggtgtcacgggactgtttcgtgtgctgcgagagc
gaggtgacggctgcactcgtcccatgcggccacaacctcttctgcatggattgcgctggg
cagatttgccagtcgcaggatcccgagtgtcccatttgccacactcctgccacgcagtgc
atccggatcttctcttaa

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