Sinocyclocheilus grahami (golden-line barbel): 107596708
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Entry
107596708 CDS
T04918
Name
(RefSeq) collagen alpha-1(XIV) chain-like
KO
K08133
collagen type XIV alpha
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sgh00535
]
107596708
Proteoglycans [BR:
sgh00535
]
Extracellular matrix (ECM) proteoglycans
Others
107596708
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
VWA
Collagen
Ig_DSCAM-DSCAML_C
VWA_2
Pur_ac_phosph_N
FN3_Tor_3rd
DUF4959
VWA_3
Motif
Other DBs
NCBI-GeneID:
107596708
NCBI-ProteinID:
XP_016142992
LinkDB
All DBs
Position
Unknown
AA seq
1731 aa
AA seq
DB search
MAIRMRVSGSRIKLWCPLISLALIQFLTPVSAQVPAPRRLRFKVLSAGRLLVSWKEPKGE
YEGYKFIYNSEPGGETTELQIARGENKAIIKDFNPRKEYSVKVIAVSGNLHSRALQGKYA
EDQSSDGDTTQTQRLKEPGTVDEGNEISGGVKNADENELKAIASEPEETHVYNVADFSIM
STIVDGLTRKVCDGVDQQDKDIKRDFSTEETASPPQDLVTSEVTAHSFCVSWTRASGGVE
KYRVVYHPTGADILEEIVVGGMENSVVLQNLNSLTEYEIAVFAVYRSAASDALRGSEITL
ALPTVSDLEVYDMTDNSMRARWRDAEGASGYMILYAPLRSETTDERELKVDESVTDVELT
EMIPDTEYSVTVYAMFGEEASDPITVQETTMSLRPPRNLRVTEVDHSSVRLNWDAVSSKV
KGYRVVYMKTDRVQTSQVDLGPITNVYLKNLSPLTEYTVAVFALYDAGHSEALSGGFNTK
LVPAPFSLMTSEVTSESFRVSWSHPARDVVLYKMAWSPTEGGQEMERMLNGAEDSYVIQD
LSPFTEYKVSLSAIYKDETESSPVVVFENTLGWTTEVHTTFPSTIAFVHLGVSNLWVDEE
TPFSMQVNWEVLDSDVEQYKVTYVSADRTEETVFVAGNRRSVILQPLLSDTRYKITVTPI
YADGESTALSKASTGKTLPLSGPSNLRVSDEWYNRFRISWDGPQFPTLGYRVIYQPIAVS
GPALETFVEDDVNTLLILNLLSDTEYSVQVIASYTTGSSQPLTGKGKTLFLGVKNLSTYQ
VLSSSLCAQWQPHRHATVYRVVIESLLNGQKQEVRVGGGASRECFFNLSPNTQYKISVYT
LLLDTEGPVVTTMATTAPAPTQPPTAPPTTIPPPTIPPAKEVCKAAKADLAFLVDGSWSI
GDDNFQKIIRFLYSTNGALDVIGPEGTQVAIVQFSDDARTEFKLSSYSDKEALLDAVQRI
TYKGGNTKTGRAIKHVKEAIFAEDAGVRRGIPKVLVVLTDGRSQDDVNKISKEMQMEGYI
IFAIGFADADYGELVNIASKPSERHVFFVDDLDAFKKIEEQLITFVCEAATATCPSMLMS
GNTLAGFRMMEMFGLVEKHYSSVQGVSLEPGTFNSYPCYRLHKDALVSQPTRYLHPEGLP
SDYTISMLFRILPETPQEPFALWEILDKNNEPLVGIILDNGGKTLTFFNYDYKGEFQTVT
FEGSEIKKIFYGSFHKLHVAISKTAAKVVIDCKTVGKKSINAAGNITIDGVEVLGRMVRS
RGKRDNSVPFQLQMFDIVCSTSWASRDKCCELPGLRVEEDCPAMPHACTCAQDSKGPPGP
SGPPGGPGIRGSRGDRGEPGLTETAGHSHFVSAARLVGPQGPPGEIGPPGPQGPPGPQGP
NGLSIQGPPGAPGEKGEKGEIGLPGPQGVPGASGGPGRDGPPGLRGLPGKDGPQGGQGPP
GPMGSPGAPGAPGPSGSPGQMGDQGTPGPPGAKGERGERGNMQSQAAVRAIARQVCEQLI
QSHLSRYNSILNQIPSQSVSVRTVPGPPGESGRPGPPGPQGEQGSPGRPGFPGASGQNGR
PGERGLSGERGEKGSPGIGTQGPRGPPGPPGPPGEGRTGSQGPPGRPGIQGTSGRSGIPG
SPGPAGPPGYCDQNSCIGYNVGVQQLPPNPYQNYGPATNDNNEEEEDPYNGYRAYPPQYY
QPSYPDPHAARFGPAHPGDTVGMRSPGTHRFSRSTAEEGSVDESEVQVEAI
NT seq
5196 nt
NT seq
+upstream
nt +downstream
nt
atggctataaggatgcgggtgtcgggatcgaggattaagctgtggtgtccgcttatctcg
cttgcactgattcagtttctcacccctgtttcggctcaagttccagctccaagaagactt
cgatttaaagtcctgagtgcaggccggctacttgtctcatggaaggaaccaaaaggagaa
tatgaaggctacaaatttatatataatagtgaaccaggtggggaaacaaccgagttgcaa
attgcaaggggagagaataaagcaataataaaggattttaatcccaggaaggagtattca
gtcaaggttatagctgtgagtggaaacctgcacagccgagcacttcagggaaaatatgct
gaagaccagagcagtgatggagacaccactcaaactcaaagactgaaagaaccaggaact
gtggatgagggcaatgagatctcaggaggtgtgaagaatgctgatgagaacgagctgaag
gccatcgcctctgaaccagaggaaacacatgtttataatgtggcagacttcagtatcatg
agcactatagtggacggtctgaccagaaaggtgtgtgatggagtggaccaacaagacaaa
gatattaaacgagatttttccactgaagagacggcatctccaccccaggacttggtcact
tctgaggtgactgcacatagtttttgtgtgtcttggactcgtgcgtctggcggtgtggaa
aaatatcgggttgtttaccatccaactggagcagatattctggaagagattgtggtgggc
ggcatggagaattcagtcgtcctgcagaatttgaactctctgactgaatacgagattgct
gtgttcgctgtgtaccgcagcgcagcgagtgacgctctgagaggcagcgagatcacgctt
gctctaccaacagtgagtgatctcgaggtgtacgacatgacagacaacagcatgagagcc
cgctggagggatgcagaaggggcttctgggtacatgatcctttacgctccactgagaagt
gagactacagatgaaagagagctaaaggtggatgagtcggtgactgatgtggaactgact
gaaatgattcctgacacagagtacagcgttacggtctatgccatgttcggagaggaggcc
agtgatcccattactgttcaggagaccaccatgtccctgagacctccacgtaacctgcgg
gtcactgaagttgaccacagctctgtgcgactgaactgggacgcagtgtccagtaaggtt
aagggctaccgtgtcgtgtatatgaagacagatagagtccagaccagtcaggtggatttg
ggtccaatcaccaatgtgtacttgaagaacctgtcacccttaacagagtacaccgttgca
gtttttgctctctacgatgccggccattcagaggcgctcagtggtggatttaatacaaag
cttgtgcctgccccgttcagcctgatgacatcagaggtgacctcagagagtttccgggtc
agctggtcacatcctgccagagatgtggtgctctataagatggcctggtcacccactgaa
ggaggacaagagatggagaggatgctgaatggagctgaggactcatatgtgattcaagac
ctgagtccttttacagagtataaggtgtcactctcagccatctataaagacgaaacggag
agcagccctgtggttgtgtttgagaatacattgggctggaccacagaagttcacaccact
tttccctccactatagcatttgttcatctgggagtgagtaacctgtgggtggacgaggag
acacccttcagtatgcaagtgaactgggaggtgctggactcagacgtggagcagtacaaa
gtgacatatgtcagtgcagaccgcacagaagagacagtgtttgtcgcgggaaacagaaga
agtgtgatcctgcaacctctcctctcagacacaaggtacaagatcacagtgacccctatt
tatgcagatggagagtccacagctctgtctaaggcctctaccggcaaaacattgccactt
tctggacccagtaacctcagagtgtctgatgaatggtataatcgcttccgcatcagctgg
gatggccctcagttcccaactttgggttacagagtcatctatcagcctatcgcagtgtca
ggtccggctctagagacgtttgtagaggatgatgtgaacaccctgctgatcctcaatctg
ttgagtgacaccgagtacagcgttcaggtcatcgcctcctacaccaccggctccagccaa
cccctcaccggcaagggcaaaacattgttcctgggggtgaagaatctcagcacgtaccag
gtgctcagtagcagcttgtgtgcccagtggcaacctcaccgccatgccaccgtctacaga
gtcgtcatcgagtcactgctcaacggtcagaaacaggaagtgagggttggtggcggtgca
tccagagagtgcttcttcaatctttcccccaacacccagtacaagatcagcgtctacact
ctcttactggacacagagggtcctgttgtcaccaccatggcgacaaccgctccagcaccc
acccagccaccgaccgcaccacccaccaccatccctcctcccaccatccccccagccaaa
gaagtttgcaaagcagccaaggcagaccttgccttccttgtagatggctcctggagtatc
ggagatgacaactttcagaagattatccgtttcctgtacagcacaaatggtgcacttgat
gtgattggccccgagggaacacaggtggccattgttcagttcagtgatgacgccagaaca
gagttcaaactcagctcctacagcgataaggaggctctgctggacgccgtgcagcgcatc
acctacaagggaggaaacaccaagacaggtcgagccattaagcatgtgaaggaggccatc
tttgctgaggacgcgggcgtaaggaggggcattcctaaagtgctggtggtgctcacggat
gggcgatctcaagatgatgtcaacaagatctctaaggagatgcagatggagggctacatt
atctttgccattggctttgctgatgctgactacggggagctggtgaacattgccagcaaa
ccaagcgagagacatgtgttctttgtggacgatctggatgccttcaagaaaattgaagaa
cagctcataacttttgtttgtgaggctgcgactgccacttgcccctcgatgttaatgagc
gggaacactttagcaggcttccgtatgatggagatgtttggtttggtggagaagcactac
agcagcgtgcaaggtgtctcactggagcctgggactttcaacagctacccctgctatcgg
ttgcacaaggacgccctcgtctctcagcctaccaggtatctacatcctgaaggccttccc
tctgactacactatatctatgctgttccgcatactgcctgaaactcctcaggaacctttt
gcattgtgggaaatccttgacaaaaacaatgagccacttgtgggcattatcctggataac
ggagggaaaacattaacctttttcaattacgactacaagggagaatttcaaacagtgact
ttcgaaggaagtgaaattaagaagattttctatggcagtttccataagcttcatgtggcc
atcagcaaaactgctgctaaagtggtgattgactgcaaaacggtgggaaagaaatccatc
aacgccgcagggaacatcaccattgatggagtggaggttctgggacgcatggtccgctca
cgtggaaagagagataactcagtgccgtttcaactccagatgtttgacatcgtctgcagt
acatcatgggccagtcgggataagtgctgtgagctcccaggcttgagagtagaagaagac
tgtcctgccatgccccatgcctgcacctgtgctcaggacagcaaaggaccacctggaccc
tcaggaccaccgggtggtcctggtatcagaggttcaagaggagatcggggggagccaggc
ttgacggagactgcagggcattcacactttgtttcagcagcccggctggtggggcctcaa
gggccacctggtgagatcggacctcctggaccgcaggggccaccgggtcctcaggggccg
aatggactgtccattcaggggccaccgggggctccaggagaaaaaggagagaagggtgaa
ataggtctgccaggtcctcagggtgtaccaggtgccagtggaggaccaggccgagatgga
cctccaggactgagaggcctaccgggtaaggatggaccccagggaggacagggccctcca
ggaccaatgggaagccctggagctcctggggctccaggaccaagtggatctccagggcaa
atgggtgatcaggggacacctgggcctcccggcgccaaaggcgaacgaggagagagaggt
aatatgcagtctcaggccgctgtccgggccatagcgcgacaagtttgtgaacagctaatt
cagagtcacttgtctcgctacaactctattctgaaccagattcccagtcagtctgtttcg
gtacgaacagtaccaggtccaccgggtgaatctggtcgaccgggacctccggggccacag
ggagagcagggttctcctggcagaccgggattccctggagccagtgggcaaaatggccgg
ccaggagagagaggtctctcaggagaaaggggagagaagggcagtccagggattgggaca
caaggccctcgtggtcctccagggcccccagggcctcctggagaaggtcggacaggaagt
cagggccctccagggagacctggaattcaaggcacctcaggacgttcaggtatccctggt
agccctggtcctgctggaccccccggctactgcgaccagaactcctgcatcggatacaac
gttggagtacaacagttaccccccaacccttaccaaaactacggccccgccaccaacgac
aacaacgaggaggaagaggacccttacaatggctaccgtgcctaccctcctcagtactat
caacccagctatcctgacccccatgccgccaggtttggccccgcccaccctggtgacacg
gtggggatgaggtcacctggcacgcatcgcttctcccgcagcacggccgaagaggggagc
gtcgacgagtcggaagtgcaagtggaggccatatag
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integrated database retrieval system
