KEGG   Sinocyclocheilus grahami (golden-line barbel): 107596740
Entry
107596740         CDS       T04918                                 
Name
(RefSeq) nucleoporin seh1-like
  KO
K14299  nucleoporin SEH1
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03013  Nucleocytoplasmic transport
sgh04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    107596740
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    107596740
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sgh03019]
    107596740
   04131 Membrane trafficking [BR:sgh04131]
    107596740
Messenger RNA biogenesis [BR:sgh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     107596740
Membrane trafficking [BR:sgh04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    107596740
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR3_2nd WDR90_beta-prop_4th Beta-prop_WDR35_TULP_N WDR55 EIF3I Beta-prop_RSE1_2nd
Other DBs
NCBI-GeneID: 107596740
NCBI-ProteinID: XP_016143023
LinkDB
Position
Unknown
AA seq 369 aa
MLTLIKEDKITSTFSTPIGYFRVPEESDETAPSVDKSRHGYLDYFQKRSSDQSIKVWDKG
GNAEWNCTASWKTHSGSVWRVTWAHPEFGQVLASCSFDRTAIVWEEIVGESNDKQRGQSH
WIKRTTLVDSRTSVTDVKFAPKHMGLMLTTCSADGVVRIYEAPDVMNLSQWSLQHEISSK
LSCSCISWNPSSSRAHAPMIAVGSDDSNVTYGGKVQIYEYNEVTRKYAKAETLMTVTDAV
HDIAFAPNLGRSFHVLAIATKDVRIFKLVPLRKDSSSSAPTKFEVQVLAQFDSHNSQVWR
VSWNITSTLLASSGDDGCVRLWKANYMDNWKCTGILKGDGSPVSGQPGALSGVLGSATAQ
SALNGATGR
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgctaaccctcatcaaagaggataaaattaccagcactttcagcacccccatcggctac
ttccgtgtgccagaggagagcgacgaaacagcgccctctgtcgacaagagtcgacatggc
tacctcgattacttccagaaacgctccagcgaccaaagcattaaggtgtgggataagggt
ggtaatgcagaatggaactgcacagccagctggaaaactcacagtggctcggtttggaga
gtgacctgggcccatccagagtttggacaagtgttggcatcctgctcctttgaccgtact
gccatagtatgggaggagattgttggagagtccaatgacaaacaacgaggacaaagccat
tggataaagagaaccacacttgtggacagtcggacatctgtgaccgacgtgaagtttgcc
ccgaagcacatgggtttgatgctgaccacatgttctgcagacggggtggtgcgaatctac
gaggcccctgatgtgatgaacctgagccagtggtccctgcagcacgagatctcgtccaaa
ctctcctgctcctgcatctcctggaacccttccagttcccgagctcatgcacctatgatt
gctgtgggtagcgatgacagcaatgtaacgtatggtggcaaagttcagatatatgagtat
aacgaagttacaaggaaatatgccaaagcagagacactgatgaccgttacagatgctgta
catgatattgcatttgctccaaatctgggacggtctttccatgtacttgctattgcaacc
aaagacgtgcgcatcttcaaactggttccacttcgaaaggacagctcttcttcagcaccc
actaaatttgaggtgcaggtgttggctcagtttgacagtcataactctcaggtttggcgg
gtcagctggaacatcaccagtacacttctggcttcctctggtgacgatggttgtgtgaga
ctctggaaagcaaactatatggacaattggaagtgcacaggcattctaaagggagatggt
agtccagtatctggtcagcctggagcgctgagcggcgtcctgggatctgctactgcacag
agtgctctaaacggggccactggaagatag

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