Sinocyclocheilus grahami (golden-line barbel): 107596978
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Entry
107596978 CDS
T04918
Name
(RefSeq) C-myc promoter-binding protein-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sgh04131
]
107596978
Membrane trafficking [BR:
sgh04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
107596978
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
PPR_3
PPR_long
PPR
DUF2464
CAS_CSE1
Motif
Other DBs
NCBI-GeneID:
107596978
NCBI-ProteinID:
XP_016143345
LinkDB
All DBs
Position
Unknown
AA seq
1714 aa
AA seq
DB search
MEDKSLRVADYFVVAGLTDSSKPLEEDVHPEDGGQRSSAQLKAPITDVAVVIRSLGEEVP
RGYTCVECTPSGLPAELNGGSLMGPQIFLCYRRGRDKPPLTDLGILFEWKEKLKPDCQII
QTTPSGRPANISSSSSQRIYITYRRASENHSHSTLAVTDICVIIPGKGETPPHAFCKVDK
NLNSSMWGSSVYLCYKKSLAKTNTLAFKAGLLSRYPEEDYDSFPLPESVPLFCLPTGASI
ECWPSHTKYSLPVFLTFVLTGASGEKVYGAAIQFYESYPEEHLTDKQRSQLGLQANGLRP
DGSMTVHTNKSICLLSHWPFFDAFHNFLTFLYRYSISGPHTLPIEKHISHFMHKVPFPSS
QRPRILVQLSPHDSLMLSQPVSSPLPLSGGRLSTLLLNLGPKNAATLLVLAVTEHKILVH
SLRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAPCPFIVGVDSRYFDLYEPP
TDISCVDLDTNTITHKEERRSLTWKILPRKACKHLINTLSSLHQQLDEGYQMSREEGQME
AFMSEREPGSGGKSLETLELEIQEAFLRFMAAILKGYRSYLLPITQAPSEKATDASSLFD
SQGFLKSRDRSHQKFYSLMTKTQMFIRFIEECSFVSDKDASLAFFDDCVDKLFGTEKGGK
VDSDKPEDTRLIELDKSHRSEHTVYITPPELPALPEGEEPPMVYSYSVFPVLSAQLCELQ
DGPRVPKATSAVRHISPISPAAIFRRSQQEIKSAQRMAKTYSSIPQMWSKCLLRHCHGLW
FICLPAYVSACHSKVRALHTAYDVLRNMQDKKLQPPDEVCYRVLMQLCGQYGQPVLAVRV
LFEMKKAGVQPNAITYGYYNRAVLESTWPSSTRGGYFLWGKLRNVVRGVVLFKQVWRRQT
THPKDTHLSDASDLDSVSHGSLDSSNDSAERVSIDTDFTKMDSSDDRSSTGGQSDQGYDS
LSKEEVRLGGGEEQNSSPDMKEKDRNSCPLSQTVLSKKEDSSPMVGIHPSSTNGETSDVF
SEALPKTKRPNSLDIFGGKPVRPSTLDLTPDKTVGELNNESVPTLIETEAVGGVVCPPKV
AVERTVSCAVAMEKEHIGVERSVSCSSALGRVVKRTGIEAGFDPLSLMAAETQAHSEGDN
ADTPTTRQDLAEEIHHYMNNLSSPLSQRSLSVDLKGCQTPSPHSSPHMSAALGSPSTSQL
QPQPRTRLFSSPSLPQGRVCRVREQRPTSLASPSSPTPSSFSMDSLLTPTLDVFKSSFLS
AGKGVAEKASRLYSRLSSQTSIAQDLNSDRVSVSSLGSGDPDFSSLIESDSCVDPDGLSS
PQRDATQRVTRPKTSPYRSNHCLESPSAPPRLYRQSSLTGPPLTVMKALQTPDACSDSSL
SQSMQNYTVEVRMSSCSRCNTCESLVYDEEIMAGWTADDSNLNSTCPFCGSPFLPLLNVD
IRNLGDQERSPSQDAHTCQTDTADELPQVYDATGNLSSNGKKDPEPVTVPYLSPLVLWKE
LESLLENEGDQAISSAAIVDHHPIVFWNLVWFFRRLDLASSLPGLYLSSKHYCSDSQPLQ
SCPSEDSKNVLVQILWDNPRLHQDPIKPCYLFWNSYCANPAVSEEEEQAVSLELLQSVVK
SIQRNDVYQPMSQILQLLGTRLGFVRQRSLYRDILFLSLVALGKSSINIDAFDREYKMAY
DRLTPSQVKMTHNCDRPPSAGVMECRRTFGLPSL
NT seq
5145 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaaaagccttcgtgtagcagactactttgtggtggcaggactcaccgactcg
tctaagcccctcgaggaagatgtccaccctgaggatggtggtcagaggagttcagcccag
ctcaaggcgcccatcactgatgtggctgtggtgattcgctccctaggggaggaagtacct
cgagggtatacctgcgttgaatgcaccccctctggacttcctgccgaactgaatggagga
agcctcatggggccgcagatcttcctctgctataggagaggcagagacaaaccgccgctc
acagacctgggcatcctctttgagtggaaagagaaactgaagccggactgtcaaattata
cagaccacaccctctggccgtcctgctaatatcagtagctcctcctcccaaaggatctac
atcacatatcggcgtgcctctgagaatcactctcactccacgctggctgtcacagacatc
tgtgtcattattcccggcaagggagagacaccaccacatgctttctgcaaggtggacaag
aatctcaacagcagtatgtgggggtcctctgtgtacttgtgctacaaaaaatctttggcc
aaaaccaacacacttgcattcaaagcaggtcttttgtccagatatccagaggaggattat
gattcctttcctttgcctgaatccgtgcccctgttttgcctgccgacgggagcgtcgatt
gagtgctggccctctcataccaaatattctcttcctgtctttttgacattcgttctcaca
ggcgcctctggagagaaggtttatggtgccgccatccagttctatgagtcctacccagaa
gaacatttgactgacaagcagcgatctcagctgggtctgcaggctaatgggctcaggcct
gatgggtccatgactgtccacaccaacaaaagcatctgccttctctctcactggcccttt
tttgatgctttccataacttcctgaccttcctctacagatactccatctcaggtccacac
actctgcccattgaaaagcatatttcccatttcatgcacaaggttcctttcccttcctca
caaaggccacgtatcctggtgcagctgtctccacatgatagcctgatgctgagccagcct
gtttcctctccactccctctgagtggcggaagactctctacactgctgttgaaccttggc
ccaaaaaatgcagcgactctgctggtgttggctgtgactgaacataagatcctagttcac
tccttacgtccagctgttcttaccagcgttaccgaggccctggtgtcgatgatttttccc
ttccactggccgtgcccatacattcctctctgcccgctggccctggcagatgtgctcagt
gctccatgccctttcattgtaggggttgactcacggtactttgacctctatgagccaccg
acggacataagctgtgtggacctggacaccaacactataactcacaaagaagagcgcaga
tccctgacctggaagatcctgccaagaaaagcctgtaaacatctgatcaacaccctcagc
agtctccaccagcaactggatgagggttatcagatgagccgtgaggaaggacagatggag
gccttcatgagtgagcgggaacctggcagtggtgggaaaagtctggaaaccttggagctg
gagatccaggaggctttcctgcgcttcatggcggccatcttgaaaggctaccgttcatac
ctgttgcccatcacacaggctccatctgaaaaagcaactgacgccagttcactctttgat
tcacaaggatttttgaagagtcgtgatcgatcccatcaaaagttttactccctcatgacc
aagactcaaatgttcattcgtttcatcgaagagtgctcttttgtcagcgataaggatgca
agccttgctttctttgatgactgtgttgacaagttattcggtacggagaaaggggggaag
gtggacagcgataagccagaagacacaaggcttattgaacttgacaaatcccaccgcagc
gagcacacggtctacatcacccctccagagctgccagcacttccagaaggagaagagcca
ccgatggtttatagctacagtgtgtttccggtactgagcgcccaactctgtgagcttcag
gatggtcccagagtccccaaagcaacatcagccgtgagacacatcagtcccatcagccca
gctgccattttcaggcgttcccaacaggagatcaaatcagcccagaggatggctaagacg
tactcctccatcccacagatgtggtccaagtgtctgctcaggcattgtcacggcctgtgg
ttcatctgcctgcccgcgtatgtcagcgcctgccactccaaggtgcgggcgctgcatact
gcttacgacgtgctgagaaacatgcaggacaaaaagttgcagccccctgatgaggtgtgt
taccgggtcctgatgcagctgtgtgggcagtatgggcagcctgttcttgctgtccgggtt
ctttttgaaatgaagaaagccggagtgcagcctaatgctattacctatggatactacaac
agggccgttctggagagcacatggccttcttccaccagagggggatacttcctgtgggga
aagctgagaaatgttgtacggggtgtggtgctgttcaaacaagtatggaggaggcagacc
acccacccaaaagacacccatctctctgatgccagtgatctcgacagtgtcagccatggc
agtctggacagctctaatgattcggcggagcgagtttccattgatacagacttcactaaa
atggattccagtgatgacagatccagcacaggtggtcagtctgatcagggctacgattct
ctgtctaaagaggaggtgaggttaggaggaggtgaggagcagaactcctctccagacatg
aaggagaaggacagaaactcttgcccattgtcccagactgtactctcaaagaaagaggat
tcgtctcctatggttggaatccatccatcttcaaccaacggggaaaccagtgatgtcttt
tctgaagcccttccaaagacgaaaaggccaaactccctagatattttcggaggaaagcct
gtaaggccaagcactctggatctaacccctgataagacagtaggagaactcaacaatgaa
tctgttccaacattgatcgaaacggaagcagtggggggcgtcgtgtgcccacctaaagtt
gctgtggagagaactgttagctgcgcagttgccatggagaaggagcatattggcgtggag
aggagcgtgagctgcagcagtgctcttggacgagtggttaagaggacaggtatcgaagca
gggtttgatcctttgtccctcatggcggctgagactcaagcccacagtgagggcgataat
gcagacacccctaccacccgccaagacctggctgaagagattcaccactacatgaacaac
ctgagcagcccgttaagccagcggtctctcagtgtggacctgaaggggtgtcagaccccg
tcccctcacagctctccccacatgtctgcagcactcggctcccccagcacttcacaactc
caacctcagccacgaacacgactcttctcctcgccctctctccctcagggccgtgtgtgc
agggtcagggagcagcggcccacttccctggcctccccttcctcacctactccctcctct
ttctccatggactctctgctcaccccgaccctggacgtgttcaagagcagcttcctctca
gctgggaagggcgtcgctgagaaagccagccgactgtattcgcgactttcctcccagacg
tctattgcacaggacttgaactctgaccgggtcagtgtgtcctctcttgggtcaggtgac
cctgatttctcctctctgattgagagcgattcctgtgtagaccctgatgggctctcttcc
ccgcagcgtgatgccactcaacgggtcacacgtcccaaaacgagcccttacaggagcaac
cactgcctagaaagcccgtctgcaccacctcgactctaccgccagtcctcgctcactggt
ccaccgctgacagtaatgaaagctctgcagaccccagatgcgtgttctgattccagcctt
tctcagtccatgcagaactacactgttgaagtacgtatgtccagttgctcgcgctgtaac
acctgtgagagtttggtgtatgatgaagagatcatggctggttggacagctgatgactct
aacctcaatagcacatgccccttttgcggctctccgtttctacctctgctcaatgtggac
atcagaaacctgggtgaccaggaaagatccccctctcaagatgcacatacttgccagaca
gacaccgcagatgaactaccacaagtttatgatgccactggcaatctttccagcaatggc
aaaaaagaccctgagccagttaccgtgccctacctgagtcctctggtactttggaaggaa
ctggaaagcttgctggagaacgagggggaccaggccatctcgtctgcagccattgtggat
caccaccctattgtgttctggaatctggtgtggtttttccgtaggctggacctggccagc
agcttgccgggcctctatttgagctccaaacactactgcagtgattctcagcctctgcaa
agttgtccatctgaagacagtaagaatgtcttggtccagatcctgtgggacaatcccaga
ctgcatcaggaccccatcaagccgtgctacttgttctggaattcatattgtgcaaatcct
gcagtatctgaggaggaggagcaggctgtgagcctagagctgctgcagagtgtcgtgaag
agcatccagaggaacgatgtctaccagcccatgagtcagatactgcagctactgggcacc
agactgggcttcgtcagacaacggagcttatatagagatatcctgttcctatctttggtg
gctttgggcaagagtagcataaatattgatgcatttgaccgtgaatacaaaatggcatat
gaccgtttgacgcccagccaggtcaagatgacccacaattgtgaccgtccacccagcgct
ggagtcatggagtgcaggagaacctttgggctgcccagtctctga
DBGET
integrated database retrieval system
