KEGG   Sinocyclocheilus grahami (golden-line barbel): 107597414
Entry
107597414         CDS       T04918                                 
Name
(RefSeq) WD repeat-containing protein 3-like
  KO
K14556  U3 small nucleolar RNA-associated protein 12
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    107597414
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sgh03009]
    107597414
Ribosome biogenesis [BR:sgh03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    107597414
SSDB
Motif
Pfam: Beta-prop_WDR3_2nd Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st WD40 Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd WDR55 WD40_Gbeta Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd Utp12 Beta-prop_CAF1B_HIR1 NBCH_WD40 DSE1_N ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_VPS8 Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_NOL10_N WD40_MABP1-WDR62_1st PEP5_VPS11_N ASA1 Beta-prop_RIG_2nd Beta-prop_WDR41 CFAP251_N Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_Aladin Beta-prop_Vps41 Beta-prop_ACSF4 Beta-prop_HPS5 Beta-prop_WDR19_1st VPS11_N WDR54 WD40_like RMC1_N Utp21 Beta-prop_LRRK2 Beta-prop_RIG_1st Beta-prop_DCAF12 PAC11
Other DBs
NCBI-GeneID: 107597414
NCBI-ProteinID: XP_016143948
LinkDB
Position
Unknown
AA seq 797 aa
MGLTKQYLRYVASAVFGVIGNQKANIAFVTLRGGEKGRYVAVGACEHVFIWDVRKAEKVL
ILEGKKHEVTYLCPSPDGVHIAVGYEDGGVRIFSLLNGESNISFSGHKSAVSVIRYDALG
ARLVTGSRDTDVIVWDIINECGLYRLKGHKDAITQILFLESKNLLITSSKDSFVKWWDLD
TQHCFKTMVGHRTEVWGMVLLNQESRLITGSADSELRAWDIQYIEEGKEVGEPQEKKVRT
LLENEEDDEEGLDEEPEERILSCKKAGSVLREARDRVVSLVTDAKAKVLACHLGRSTLQV
IRTMGCEYALCSLFVPGDRQIILGTKSGKIQIFDLASGSLLETTDAHDGALWSMCLSPDQ
RGIVTGGADKTVKFWDFELIKDQDSGKNKRLTVKHTRTLQLDEDVLCVRYSPDQRLLAVS
LLDCTVKIFYTDTLKFFLSLYGHKLPVLCLDISHDSALIATGSADRNVKIWGLDFGDCHR
SMFAHDDSIMFLQFVPKTHLFFTAGKDRKIKQWDADKFEHIQTLEGHHREVWCLAISPNG
DHIVSSSHDKSLRLWERTREPIILEEEKEMEREAEFEESLAKGDEPVVPGETKGEAEPAG
KKTIETVKAAEQIMEAIELYREESEKLEEHRAACKAAGKELPPPKMNPILVAFGNISPSR
YVLEVIKKVRSSELEVSLLVLPFPYVPDLLKLFNGYVQQGLEVELVCRCLFFLLRVHFGQ
ITSNQMLLSVIDELRTNTISKVREIRDVLGFNSAGLQFLQREIESKEDVMFFADATDRFE
EKKRKRRKRERAVLTVT
NT seq 2394 nt   +upstreamnt  +downstreamnt
atgggtttaactaagcagtacctgcgctatgtggcgagtgctgtatttggagtgatcggc
aatcagaaggccaacatcgcatttgtgacccttaggggaggtgagaagggtcgatatgtt
gctgtgggagcttgtgagcatgtgttcatatgggatgtccgcaaagctgagaaggttctt
atacttgaaggtaaaaagcatgaggtgacatacctgtgtccttctcctgatggcgtccac
atagcggtaggttatgaggatggaggtgtgcgcatctttagtctgctcaatggcgaaagc
aacatctccttcagtggacacaaatcagctgtctcagttataagatatgatgcactgggt
gctcgtctcgtcactggctccagagacacagatgttattgtgtgggatatcatcaatgag
tgtggtctgtacagactcaaaggacacaaagatgcaatcacacaaattttgtttttggag
agcaaaaacctgctgattacaagctctaaggacagttttgtaaagtggtgggacttggac
acacagcattgtttcaagaccatggtggggcatcgcactgaggtatggggaatggtcctg
ttgaaccaggagagtaggttgattacagggtctgctgacagtgagctcagagcctgggac
attcagtacattgaggagggtaaagaagtgggggagccacaggaaaagaaagtcagaact
cttcttgagaacgaagaggatgatgaggaaggacttgacgaagagccagaagaaagaatt
ctcagctgtaagaaagctggttctgttctgagggaagccagagacagggtagtgtccttg
gtcacagacgccaaagctaaagtgcttgcatgccatcttggtcggtccaccttgcaggtc
attcgtaccatgggatgtgaatatgctctctgctcgttatttgttcctggagacagacag
attatcttaggaacaaagagtgggaagattcagattttcgacctggcctcaggaagcctt
ctagagacgactgatgcccatgatggagctctttggtccatgtgtctctctccagaccag
agagggattgtaactggtggtgctgacaagactgtgaaattctgggactttgagctcata
aaggatcaggactctgggaagaacaagagactaacggtgaagcacacacgcaccctacag
ttagatgaggacgtgctgtgtgtgcgctacagtcctgaccagagactgctggctgtctct
cttctcgactgtacggtgaagatcttttacacagacacgctaaagttcttcctgtcgcta
tatggacacaagctgcccgttctatgcctggacatttcacatgacagcgctttaatagcc
acaggctcagcagacagaaacgtgaagatctggggtttggacttcggagactgtcatcgc
tctatgtttgcacatgacgacagtatcatgtttcttcagtttgtccctaaaacccatctg
ttcttcactgcgggaaaggacagaaagatcaagcagtgggacgctgataagtttgagcac
atccagacgttggagggtcatcatcgggaggtctggtgcctggccatcagccccaatgga
gaccacatcgtctcctcgtctcatgataagtccctgaggctgtgggagagaaccagggag
cccatcatcctggaggaggagaaggagatggaaagggaagcagaatttgaggagtcgtta
gctaaaggtgatgaacctgtggtccctggagagactaaaggagaggcagagcctgctggg
aagaagaccattgagacagtgaaagctgctgagcaaataatggaggctattgagctctat
agagaggaaagtgaaaagctggaggagcacagagccgcttgcaaggcagcggggaaggag
ttaccaccccctaagatgaaccccatccttgtcgcttttggaaatatctctccctctcga
tatgttctggaagttattaagaaggtgcggtccagtgagctggaagtgtctctgctggtg
ctgccgtttccttacgtcccagatctgctgaagctcttcaatggttacgtacagcagggc
ctggaggtggagctagtgtgccgctgtctcttcttcctgctcagagtccattttggtcag
atcaccagtaatcagatgctgctgtcagtcattgatgagttaaggaccaacacgatctct
aaagtgcgagagatcagggatgtcctgggttttaacagtgcgggtcttcagttcctgcag
cgtgagattgagagcaaagaggacgtaatgttctttgctgatgccacagaccgctttgaa
gagaaaaaaagaaagagaaggaaacgtgaaagagccgtccttacagtcacatga

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