Sinocyclocheilus grahami (golden-line barbel): 107597946
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Entry
107597946 CDS
T04918
Symbol
exosc2
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107597946 (exosc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgh03019
]
107597946 (exosc2)
Messenger RNA biogenesis [BR:
sgh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
107597946 (exosc2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
107597946 (exosc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_6
ECR1_N
Motif
Other DBs
NCBI-GeneID:
107597946
NCBI-ProteinID:
XP_016144646
LinkDB
All DBs
Position
Unknown
AA seq
196 aa
AA seq
DB search
MAVEMRLPAVHKHISLAASQSNRDDKHLVVPGDVITSDTGFMRVGAEVQSIFSDGALSLH
TRSLKYGKLGQGVLVFVSPSIVKRQKTHFHNLPCGASIILGNNGYVWLYPTPGQQDEEAG
GYYTSMEPVSLSDREVISRLRNCLLALAAHKVLLYDTSVLYCYEASLPQQIKDILKPEIM
EEIILETRQRLVEHEG
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggagatgaggctcccagcggttcacaaacatatttcactggcagcatcacag
tctaaccgggacgacaaacatctggtggttcctggcgatgtcatcacatctgacacgggc
ttcatgagagttggagcagaggttcagtcaatcttctcagatggcgctctctctctgcac
acacgcagtttaaaatacggcaagctgggtcagggtgtgctggtgttcgtgtcaccgtcg
atagtgaagagacagaagactcatttccacaacctgccatgcggcgcctccataatactg
ggcaacaacggctatgtgtggctgtatcccacaccgggacagcaggacgaggaggccgga
ggatattacaccagcatggagcccgtgtctttgtccgatcgggaggtgatttccaggctc
aggaactgtttgttggctcttgcggctcataaggttttgctgtacgacacaagcgtgctt
tactgctacgaagcgtctcttccgcagcagattaaagatatcctgaagccagaaatcatg
gaggagatcattctggaaacaaggcagcgcctagttgagcatgaaggataa
DBGET
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