Sinocyclocheilus grahami (golden-line barbel): 107598217
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Entry
107598217 CDS
T04918
Name
(RefSeq) thrombospondin-3b
KO
K04659
thrombospondin 2/3/4/5
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04145
Phagosome
sgh04510
Focal adhesion
sgh04512
ECM-receptor interaction
sgh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107598217
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107598217
09144 Cellular community - eukaryotes
04510 Focal adhesion
107598217
09142 Cell motility
04820 Cytoskeleton in muscle cells
107598217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sgh04131
]
107598217
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sgh04147
]
107598217
00536 Glycosaminoglycan binding proteins [BR:
sgh00536
]
107598217
Membrane trafficking [BR:
sgh04131
]
Endocytosis
Phagocytosis
Opsonins
107598217
Exosome [BR:
sgh04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107598217
Exosomal proteins of colorectal cancer cells
107598217
Exosomal proteins of bladder cancer cells
107598217
Glycosaminoglycan binding proteins [BR:
sgh00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107598217
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
cEGF
EGF_MSP1_1
EGF
Motif
Other DBs
NCBI-GeneID:
107598217
NCBI-ProteinID:
XP_016144982
LinkDB
All DBs
Position
Unknown
AA seq
953 aa
AA seq
DB search
MELRKIVPDLLVLYVAFGHFSESAEFKVINVLELHDARQTAAAIESLSGALQTVGDLYIT
STFMLPPKLGGVLFGLYDEEDNKKYLEVAAVGKINKLLVRYLRSDGKAHAVNLQNPVLAE
GRTQSLILRMSGLRRSHINLELYVNCRLVDSAQGLPSFVGLPSKAESLDVRTGQKSYARI
QGSIESVKLALGGSLATAGLLIDCPFQGDSAISNAVGSDINAILGDQTKALIGQLIIFNQ
IMGELREDIREQTKEMSLIRNTIHECQVCGFHEPQSRCHPNPCYNAVSCMESTMYPGYQC
GPCPEGMTGNGTHCQDIDECTAQPCVSVELCVNTAKGFTCESCPIGFTGPTLRGVSVEFA
KSHKQECVDIDECAEHSGACVPNSVCINTVGSFKCGQCKAGFVGNQTTGCFARRTCETLG
YNPCDVNAHCMMGRNSDISCVCNVGWAGNGNTCGPDSDIDGYPDGPLPCIDNDKHCRADN
CANTPNSGQEDTDGDGIGDQCDEDADGDGIKNVEDNCRLVPNKDQQNSDTDSYGDACDNC
PSVPNGDQLDTDGNGKGDICDNDIDGDGIPNVLDNCPKIPNPMQTDRDADGVGDACDSCP
EVNDPLQSDMDNDLVGDVCDTNKDMDGDGYQDTRDNCPEVPNSSQLDSDNDGIGDECDDD
DDNDGIPDILPPGPDNCRLVPNPSQKDTDANGVGDMCEADFDNDKVTDLLDACPESAEVT
MTDFRAFQTVILDPEGDAQIDPNWVVLNKGMEIVQTMNSDPGLAVGYTAFNGVDFEGTIH
VNTATDDDYVGFIFGYQDSSSFYVVLWKQTEQTYWQNLPFKASAQPGLQLKAVKSRTGPG
EYLRNALWHTGDTPGEVTLLWKDPRNVGWKDRTSYRWHLTHRPQVGYIRLRLYEGTALVA
DSGVLIDTTMRGGRLGVFCFSQENVIWSNLGYRCNDSIPDDFMLYQKQMNVRT
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggagttgaggaaaattgtgccagatctgcttgtcctgtatgttgcgtttggacacttc
tccgaatcggcggaatttaaagtgattaatgtattggagctccatgatgcacgtcagaca
gctgcagctatagagagtctgtctggagcgctgcagacggtaggagatctgtacatcacc
tccaccttcatgctgccacccaaactcggcggcgtattgttcggtctctatgatgaagag
gacaacaagaaatacctggaggttgctgctgtaggcaagatcaacaaattactggtgcga
tacttgcgctctgatggaaaagctcatgctgtcaatttacaaaacccagtcctcgctgag
ggacgcacccaatcacttatactcagaatgagtggactgagacgcagtcacataaaccta
gagctttacgtaaactgccgtttggtggactctgctcagggcctcccttcatttgtcggg
cttccatcaaaggcagaatctttggatgttcgcaccggacagaaatcttatgccaggata
cagggttcaatagagtctgttaaactagctctcggaggctctctggctacagctggtctt
ctcattgactgtccattccaaggagattcagctataagcaatgcagtaggcagtgacatt
aatgccatcctcggtgatcagaccaaagctctgatcggacagttgatcatctttaaccag
atcatgggagagctgagagaggatatcagagaacagacaaaagagatgtctctcatcaga
aacaccattcatgaatgtcaagtgtgtggattccatgagcctcagtcccgatgtcatcct
aacccctgctataacgctgtgagctgcatggagagcacgatgtacccaggatatcagtgt
ggcccctgtccagagggcatgactggaaacggaacacactgccaggacattgatgagtgt
actgctcagccctgtgtttctgtagagttgtgtgtgaacacagctaaaggcttcacctgt
gagtcctgtcccataggattcactggtccaacactcaggggggttagtgttgagtttgcc
aagagccacaagcaggaatgtgttgatattgatgagtgtgctgagcactctggtgcctgt
gtgcccaactcagtctgtataaatacagtgggatcgttcaagtgtggccagtgtaaagct
ggatttgtgggtaatcagactacaggctgttttgcaaggaggacgtgtgaaactctgggc
tataacccctgtgatgtgaatgcacactgtatgatgggccgcaacagtgacatttcctgt
gtgtgtaacgttggctgggcaggtaatgggaacacctgtggtccagactcagacattgac
ggttaccctgatgggcctcttccatgcattgacaatgacaaacactgcagagcggacaac
tgtgcaaataccccaaactctgggcaagaggacacagatggagatgggattggtgatcaa
tgtgacgaggatgcagacggagatggaattaaaaatgttgaggacaactgtcgtctggtg
cccaataaggaccagcagaactctgacacagactcctatggcgacgcttgtgataactgc
cccagcgttcccaatggagatcagcttgatactgatggcaatggcaagggagacatctgt
gacaatgatattgatggagatggcatccctaacgtgttggataactgtcctaagataccc
aaccccatgcagacagaccgagatgcagatggtgtgggagacgcgtgcgacagctgtcct
gaggtcaacgatccattgcagtcagatatggacaacgatttggtgggagatgtatgtgat
acaaacaaggacatggatggtgatggatatcaggacacacgggataactgccctgaagta
cccaacagttctcagctggactcagataatgatggcatcggggacgagtgtgatgatgat
gatgacaatgatgggattccagatatccttcctcccggcccagataactgcagacttgtt
cccaaccccagtcaaaaagatactgatgctaatggggttggtgacatgtgtgaggcagac
tttgacaatgataaggtgactgacttgttggatgcatgccctgaaagtgcagaggtcact
atgacagatttcagggcatttcagacagtcattctcgacccggaaggagatgctcagatc
gaccccaactgggtagtactgaataagggaatggagattgtgcagaccatgaacagcgac
cctggtttggctgtgggctacacagcatttaatggtgttgattttgagggaacaatccat
gtgaacacagccactgatgatgattatgtgggattcatctttggctatcaggactcttcc
agcttctatgtggtgttgtggaaacagacagaacagacgtattggcagaatttacctttc
aaagcctcagctcagcctggactacagcttaaggcagtgaagtctcgtacaggtcctggt
gagtatctgcgtaatgccctgtggcacacaggagacacaccaggggaagttactttgctc
tggaaggacccaaggaatgtgggttggaaggatagaacttcctatcgctggcacctcact
caccgcccacaggtgggctacatacgattaagattgtatgaaggtacagcactggtggca
gattcaggagtcctgatagacacaactatgagagggggacggctgggcgtcttctgcttc
tctcaggagaacgtcatatggtctaatctcggctatagatgcaatgattctattccagat
gactttatgctgtaccagaagcagatgaatgtgaggacataa
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