Sinocyclocheilus grahami (golden-line barbel): 107598309
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Entry
107598309 CDS
T04918
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04120
Ubiquitin mediated proteolysis
sgh04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107598309
04120 Ubiquitin mediated proteolysis
107598309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sgh04121
]
107598309
Enzymes [BR:
sgh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107598309
Ubiquitin system [BR:
sgh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107598309
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_11
zf-RING_5
zf_RING_Vps8_fungal
zf-RING-like
zf-ANAPC11
FAR1_N
zf-RING_Vps41
zf-HC5HC2H
FANCL_C
zf-Nse
Motif
Other DBs
NCBI-GeneID:
107598309
NCBI-ProteinID:
XP_016145089
UniProt:
A0A672MCH9
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MVRAALATGTSLVLTGAVVAHAYFLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKL
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWVFHFRVLSLMVLLGVLDFLFVNHACHSIITRGASVQLVFGFEYAI
LMTVVLTIFIKYTLHTVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQATDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASQPNQTPAPAPAQAPAPAAPANAP
VPPPVNVAPGMLPQFPPGLFPFWGPFPGAPPPAAPGAQAATDAPQTSAAATQAQGAESGA
SSSTQPNADSASAAPGGMPGFPFSMPPPFPSAPWLPMPPPPPFMSSMPPPPSTLSTMSEA
ELRELEQEGRRGLEARLQCLHNIHTLLDAAMLNIHHYLSTVATLSPPRSENNAGETSTSV
NAESSSSTGNTETPSQENEAQSDGSVNEATGFSLPDSTTGVDKDRKEEDEDDGEPNAAEL
RRRRLRKLETTNTPDH
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgagccgctcttgcgacaggcaccagtttggtgctgactggcgcagtggttgct
catgcatacttcctcaagcaccagttctaccccactgtggtatacctcaccaaaagcagc
cctagcatggcagttttatacattcaggctttcgttttggttttccttttggggaaatta
atgcggaaagttttttttgggcaactgagagctgctgaaatggagcatctgattgaacgc
tcctggtatgcggtgaccgagacctgtttagcctttacagtcttcagggatgatttctct
cctcgctttgtggcccttttcactttgctgcttttcctcaagtgcttccactggcttgct
gaagacagggtggactttatggaaaggagtccaaatatctcatgggtcttccacttcaga
gttctctctctgatggtgttgctgggagtgttggactttctgtttgtcaatcatgcgtgt
cacagcattataacaagaggagcttcagtgcagctggtttttggatttgagtatgcaatt
ctgatgactgtggtcctcaccatcttcatcaagtacaccttacatacagttgatctgcag
agtgagaatccgtgggacaataaggccgtctacatgctctacacagagctctttacaggt
ttcatcaaggtgcttttgtatatggcgttcatgaccataatgataaaagtgcacaccttc
cctctgtttgccattcgacccatgtatctcgcaatgaggcaattcaagaaggcagtaaca
gacgccatcatgtctcgacgagccattcgtaatatgaatacactctatccagatgccacc
cctgaagacttgcaagccaccgacaatgtgtgcatcatttgcagagaagagatggtgact
ggagccaagaaactgccgtgcaaccacatctttcactcaagttgccttcgctcatggttc
caaagacagcagacgtgtccgacctgtcgtatggatgtcctccgagcgtcccagcccaac
cagactcctgccccagctcctgcacaagcacctgcccctgctgctcctgctaatgccccc
gtacctccaccggtcaatgtcgctccaggtatgctgcctcagtttcctccaggtctgttt
cccttttggggtcccttcccaggcgcgcctcctcctgctgctccaggtgcacaggcagct
actgacgctccacagaccagcgccgctgcaacacaggcccagggagcagaatcaggagcc
agtagctcgacccagccgaatgcagacagtgcctctgctgctcccggaggaatgcctgga
ttccccttctccatgcctccacctttcccatcagctccatggctgccgatgcctccacct
ccaccctttatgtcatccatgccgccgcctccatcgactctgtccaccatgtcagaggcc
gagctcagagaactggagcaggagggcaggcgaggtttggaagccaggttgcagtgcctt
cacaacatccacacattgctggatgccgccatgctcaacattcaccactacctcagcacg
gtggctacgttaagtcctccaagatcagaaaacaatgctggtgagacgagtacatcagtg
aatgcggagtcctcttcctccacgggcaacacggaaactcccagtcaggagaacgaggct
cagagcgatggatctgtaaatgaagctacaggcttttctctaccagactcaaccacagga
gtggacaaagacaggaaggaggaagatgaggatgatggtgagccaaatgccgccgagttg
agacgacgtcgcctgcgtaaactggagaccactaacactcctgaccactga
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