Sinocyclocheilus grahami (golden-line barbel): 107598435
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Entry
107598435 CDS
T04918
Name
(RefSeq) integrin alpha-10-like
KO
K06586
integrin alpha 10
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04510
Focal adhesion
sgh04512
ECM-receptor interaction
sgh04810
Regulation of actin cytoskeleton
sgh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107598435
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107598435
09142 Cell motility
04820 Cytoskeleton in muscle cells
107598435
04810 Regulation of actin cytoskeleton
107598435
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sgh04515
]
107598435
Cell adhesion molecules [BR:
sgh04515
]
Integrins
Integrin alpha subunits
107598435
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
Integrin_A_Ig_3
FG-GAP_3
VWA_2
ITGAX-like_Ig_3
FG-GAP_2
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
107598435
NCBI-ProteinID:
XP_016145258
LinkDB
All DBs
Position
Unknown
AA seq
1171 aa
AA seq
DB search
MESHNYLLLFKITVLLKGLCECFNIDVKRPRIFSGPEDALFGFSVLQHENNGEKSILVGA
PWDGPQNNRKGDIYKCIVGDEINSNCSKVNLGENAFQNVSRNLKNSHLGMTLTPTDSDGF
LVCAPLWSQECGTSLFSTGICASVTNDMEPKNIIAPTAQRCTTYMDIVIVLDGSNSIYPW
YEVQNFLSNILSKFHISPEQMQVGVLQYGEISVHEWSLRDYQTTQDVVEAAKNISRQEGR
ETRTAYAIQMACMEAFSPDRGAREGATKVMIVVTDGESHDGEDLPESLAECEKRNITRYA
IAVLGHYIRRQQDPETFINEIKYIASDPDEKYFFNVTDEAALNDIVDALGDRIFSLEGTL
GYNESAFLMEMSQIGFSTHILDDGILFGMVGAYDWEGGVLKESKEGQLKPSREAFEKEFP
LELKNHAAYLGYTVSSVVVGDWRRLYVAGAPRFKHKGKVILFDLTPEGDVIITQALNGEQ
IGSYFGSEVCVVDVDQDGITDILLIAAPMFLGAGNKETGKVYIYCLDGDGFAPNGTLHSQ
KKAQDARFGYAMAVAHDLNHDGYADLLVGAPLEDDHQGALYIYHGDEYYIIPHYKQRIPG
SSLSAGLQYFGRSLSALLDLDGDELLDLAVGAQGTAVLLKSRSIVQINVSLSFQPHSINV
IQKNCHRADRDSACLNVTVCFLALSRSPGFYGTYFDMQMEAMLDDRKILARALFDYNSQR
QTLMGVSVRVGQTMCYTLPFHVFDTADYIRPISFTLRFKINDTESGPVLDEGWPTTFKKS
IPFFKDCGEDDVCVTDLVLQAHMDISGTRQQPYVIRSPRRRLAVEVQLQNQLENAYNTSL
TLHYSKNLHFSSLSIREDAQFKIECTALSSNSLSCNVSYPVFRSQSKVNFMLEFEFSCTS
LISKIQMKLVASSDSVESEGTFLDNSVQLQSIVQYEPNLFITSESNLNRYEVHPTRTVSE
GTGPGFHTQFRVLNLGCYAVSNLELSVNLPAVASGDRVFATVVDAFPHNSSGVNCSIISD
LSKLKSSQRDVRPLHPENMKKTELLNCTSSWCVEIVCHIQQLLKEQTALIRITRRIHDNF
FRQAKFKAVTIVGSYQLSARESSLITMGSAALLRETVLEVLKGRSIPISLWILIGSIIGG
LLLLALLVFILWKLGFFTRKQRKEEDENDDN
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggagagtcacaactatctgctgttgttcaagatcactgttcttctcaaagggctgtgt
gagtgttttaatattgatgtgaagaggccacggatcttcagtgggcctgaagatgctctg
tttggcttctctgtgttacagcatgagaacaatggagaaaaatcaattctggttggtgct
ccatgggatggaccacaaaataacaggaagggggatatttacaagtgcattgtgggagat
gagataaattccaattgctcaaaagttaacctaggtgaaaatgcatttcagaatgtgtct
cgaaatcttaaaaactctcatttggggatgacgctgacccctactgattcagatggcttc
ctggtctgcgctccactttggtcccaggaatgtggtacatctctgttcagcacaggaatc
tgtgcatctgtcactaatgacatggagcccaagaacatcattgcacccactgcccagaga
tgcaccacatacatggacatagtgattgttttagatggttctaatagtatctacccctgg
tacgaggtgcaaaacttccttagcaacattctcagcaagttccacataagtcctgagcaa
atgcaggtaggtgtcctgcagtatggggagatctcagtccatgagtggtctctcagggac
tatcagacaacacaggatgtggttgaagctgccaagaacatcagtcgtcaagagggacgg
gagacccgcactgcgtacgccatccaaatggcctgcatggaggcctttagtccagacaga
ggagcgagggaaggggccactaaagtgatgatagtcgtgacagatggagagtcccatgat
ggtgaagaccttcctgagtccctggctgaatgtgagaaacgtaacatcaccagatacgcc
atcgctgtattaggtcactacatccgcagacagcaagacccagagacttttatcaatgaa
attaagtacattgccagtgaccccgatgagaaatacttcttcaatgtgacggatgaggca
gctcttaatgatattgtggatgcattgggggatcgcatttttagtctagaggggaccctg
ggatacaatgaaagtgcctttctcatggagatgtctcagattggtttttcaacacacata
ttggatgatggcatcttgtttggcatggtgggtgcatatgactgggagggaggcgtcctg
aaggagagcaaagaagggcagcttaagccctcaagagaagcctttgagaaagagttccca
ttggagctgaagaatcatgcagcctacctaggttacacagtgtcctcagtggttgtaggt
gactggaggaggctgtatgttgctggtgcgcctagattcaagcacaaaggaaaggtcatc
ctgtttgacctcacccctgaaggtgatgtcataatcacacaggccctaaatggagaacag
attggctcatattttggcagtgaggtgtgtgtggtggatgtggatcaggacggaataaca
gatatcctgctcatagctgctcccatgttcctgggagcaggaaacaaagaaacaggcaaa
gtctatatctactgtttggatggggatggttttgcccctaacggtacgctacattctcag
aagaaagcacaggatgcacgctttggttatgctatggcagtagcccatgacttaaaccat
gacggatatgctgacctgcttgtgggagctccactagaggatgaccaccagggagctctt
tacatctaccatggcgacgaatactacatcataccgcattataaacaacgtatcccaggc
tcctctctctctgcaggcctacagtattttggccgtagcctgagcgctctgctggatctg
gatggggatgagttactggatcttgctgtgggagcacagggcactgccgtcctgctgaag
tcacgcagtatagtgcagatcaacgtcagcctgtccttccagccacactccatcaacgtg
atacagaagaactgccacagggctgaccgagattctgcatgccttaatgtcacggtttgc
tttctggctctgtctcgctctcctggcttttacggcacatattttgatatgcagatggag
gccatgttggatgacagaaagatcttggctcgtgctctgtttgactacaactcccagcgg
cagaccctaatgggcgtcagtgttcgtgtaggccagaccatgtgctacacgctaccattt
catgtctttgatacagctgattacatccgaccaatcagcttcactttgcgcttcaaaatc
aatgacacagagagcggcccggtactagatgagggctggccaacaacattcaagaagtct
atcccattcttcaaagactgtggggaggatgacgtgtgtgtaactgatctggttttgcag
gcccatatggacatttctggaacaaggcagcaaccgtatgttatacgcagccctcggcga
cggcttgcagtagaagtgcagctacaaaaccagctagaaaatgcatataacactagcctc
actctacattactccaaaaatctgcacttcagcagtctgagtatacgggaagatgcccag
tttaagattgaatgcacagctctaagctccaacagtctctcctgtaatgtcagttaccca
gtgttccgctctcagtcgaaggtgaacttcatgttggaatttgagttcagttgtacatct
ctcatcagtaagatccagatgaagcttgttgcttccagtgacagtgtggagagtgaaggc
acatttttggacaacagtgttcagttacagagtattgtacagtatgagcccaatctcttc
atcacaagtgaatccaacctaaaccgctatgaggttcacccgaccaggaccgtgtctgag
gggacaggacccgggttccacacacaattcagggtgctgaatctgggctgttacgctgtc
agtaatctggagctgagcgtcaatttgcctgccgtggcttcaggagacagagtttttgcg
actgtggttgatgctttccctcataattcttcaggtgtgaactgcagtataatcagtgat
ctttcgaagttaaagtccagtcagagagatgtacgtccacttcacccagaaaacatgaag
aaaactgaactattgaattgcacttcctcttggtgtgtggagatcgtgtgtcacatccag
cagctactgaaggaacagacagccttgattcgtatcaccaggaggatacacgacaacttc
tttagacaggccaagtttaaagcagtgacaattgtgggctcttaccagctgtcagctcga
gagtccagtctgattacaatgggaagtgctgccctcttgagggagacggttttggaagtg
ctgaaggggcgttcaatcccaatctctctctggattctgattggcagcatcattggagga
ctgctgcttcttgcactcttagtatttatcctttggaagttggggtttttcacaaggaaa
cagaggaaggaagaggatgagaacgatgacaactga
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integrated database retrieval system
