Sinocyclocheilus grahami (golden-line barbel): 107598939
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Entry
107598939 CDS
T04918
Name
(RefSeq) glutamate receptor ionotropic, kainate 1-like
KO
K05203
glutamate receptor, ionotropic kainate 3
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
107598939
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sgh04040
]
107598939
Ion channels [BR:
sgh04040
]
Ligand-gated channels
Glutamate (ionotropic)
107598939
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan-Glu_bd
SBP_bac_3
Lig_chan
Motif
Other DBs
NCBI-GeneID:
107598939
NCBI-ProteinID:
XP_016145868
LinkDB
All DBs
Position
Unknown
AA seq
519 aa
AA seq
DB search
MNITDSLSNRSLVITTILEEPYVMLKKSDKALVGNDRFEGFCVDLLKELASILGFSYEIH
LVPDGKYGFQDDKGQWNGMIKELMEHRADLAVAPLTITFMREKAIDFSKPFLNTGISILY
RRPNSTNSGFFSFLNPMTPDIWVYILLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSDVV
ENNFTLLNSFWFGVGSLMQQGAYPFHCDDGKNPPMRSSKSRVSTFEKMWAFMSSRQSTSF
VKSIEDGIQRVLKSDYALLMESTTIEYVTRRNCNLTQVGGIIDSKGYGIGTPKGSPYRDK
ITIAILSILEDGRLHMLKEKWWSGSNCLEDERYETGPMGIQNLGGIFIVLASGLVLSVFV
AIGEFIYKMRKNAEREQVFLQCGGRRDQTVVHMRETGETQAPPPAASHGEDGRSDQHALL
QRPSPASKGQHELQPRDDARVSMTCLGDGHLRHVPGAMPESRDYGPEMITAFTINRRDIR
HQMASQNGGSSSKPGSDHILKPMYPTMPLREGGRSVSFL
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcactgactcgctttccaaccgctcactggtcatcaccaccatcctggaggag
ccatatgtcatgcttaagaagtctgacaaggcactcgtcggcaatgaccgctttgagggc
ttctgtgttgacctgcttaaagagttggccagcattctgggtttttcctacgagatccac
ctggtgccggatggaaagtatgggtttcaagatgataaaggccagtggaatgggatgata
aaggaactcatggaacacagagctgaccttgctgtggctcctctcacaatcacctttatg
cgagagaaagctattgacttctccaaacctttcttgaacactggcatcagtatcctgtac
cgcagacccaacagcaccaactctggcttcttctccttcctgaaccccatgacccctgat
atctgggtatacatcctgttggcctacctgggagtcagctgtgtactcttcgtcatcgcc
aggttcagcccgtacgagtggtatgacgcccatccgtgtaacccaggctccgatgtggtg
gaaaacaacttcacccttctcaacagcttctggtttggcgtgggctccctcatgcagcaa
ggtgcttatccatttcattgcgatgatggaaagaacccgcccatgcgctcgtctaaatca
agagtgtctacatttgagaagatgtgggctttcatgagtagcaggcagagcacgtcgttt
gtcaagtccattgaagatgggattcagagagtgttaaagtcagactacgcccttctaatg
gagtcaacgaccattgagtatgtgacacgcagaaactgcaatctcacgcaagtcggcggc
atcatcgacagcaaaggttacggcatcggcaccccaaaaggctcgccatacagggataaa
atcacaattgccatcctcagtatcctggaagatggccgtcttcacatgctcaaagagaag
tggtggagcggcagcaactgtctggaagacgagcggtatgaaacgggtcccatgggcatc
cagaatctgggcggcatattcattgtattggcgtctggtctggtgctgtcagtgtttgtg
gctataggagagttcatctacaagatgcgaaaaaatgcagaacgtgaacaggtctttctg
cagtgtggtggtagaagagatcaaactgtcgttcacatgcgagagacgggtgaaacacaa
gctccaccgccagccgccagccatggtgaagacggacgcagtgatcaacatgcactcctt
caacgaccgtcgcctgccagcaaaggacaacatgagctgcaaccccgcgatgacgcccgt
gtttccatgacttgcctgggcgacggccacctgaggcacgtccccggcgccatgccggag
agcagggactacggtcccgagatgattacagcattcaccatcaaccgcagagacatccga
caccaaatggccagtcagaacggtggcagtagcagcaaaccaggtagtgaccacatcctc
aaaccaatgtatcccaccatgccattgcgagagggaggccgatcggtatccttcctgtga
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