Sinocyclocheilus grahami (golden-line barbel): 107599003
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Entry
107599003 CDS
T04918
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E-like isoform X1
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04010
MAPK signaling pathway
sgh04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107599003
04020 Calcium signaling pathway
107599003
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sgh04040
]
107599003
Ion channels [BR:
sgh04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
107599003
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
107599003
NCBI-ProteinID:
XP_016145975
LinkDB
All DBs
Position
Unknown
AA seq
2451 aa
AA seq
DB search
MLELGTCSVSAQTLSDRNALAVPSFSQGMCGGSPPSQCFLLQPQHPESWLKHRGTLEDGS
RSCSLLEPQSLGDSFLSHASSFDTLYAPHTRPMGLAPSSLDLGGLCKGAAALGLDPDMPV
SPNIIKRRRGGLIEQRDIIKAHQAHKIQSTPQARRKEWEMARFGDDVPGLLGAGDGGSER
SRNRDAPAVSTGGVSPAFKQTKAQRARTMALYNPIPVRQNCFTVNRSLFIFGEDNIVRKY
AKKIIEWPPFEYMILATIIANCIVLALEQHLPGEDKTPMSKRLEKTEPYFIGMFCFEAGI
KIIALGFVFHKGSYLRTGWNVMDFIVVLSGILATAGHHMNISLDLRTLRAVRVLRPLKLV
SGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYSGKLHKRCVAFSNITDSE
RADSSELDFPCGAKPCPENYNCTGPWQGPNDGITQFDNILFSILTVFQCITMEGWTAVLY
NTNDALGCTWNWLYFIPLIIIGSFFVLNLVLGVLSGEFAKERERVENRRSFMKLRRQQQI
ERELNGYRAWIDRAEEVMLAEENKNSGPSALDVLKRATTIKRRGVDDVRRAPEEQYADIS
SVGMPLNRASIRSAKRGPTSFFRRKERMLRISVRRMVKTHTFYWIVLSLVALNTFCVAIV
HHKQPQWLSSLLYYAEFLFLGLFLTEMFLKMYGLGPRLYFHSSFNCFDFGVIVGSIFEVL
WGFFRPGTSFGISVLRALRLLRIFKITKYWASLRNLVVSLMSSMKSIISLLFLLFLFILV
FALLGMQLFGGRFIFEDYTPTNFDTFPAAIMTVFQILTGEDWNEVMYNGIRSQGGVKSGM
WSSVYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEEEEEAFNQKHALQKAKEVGP
MSSFMSSERRRRPYLYRKRAIHRSRAAYSFEDSESLADARPLNTSNSFMSRRERRRRLTM
SVWEQRTSQLRRHRQMSSREILFSSPSEEHDGPPGCHHHRKPGISPSNSMRRAIETTTTT
TMPEASLEPPMPMDMPVDEQALSIPIPEPPLTIPVPEPPMPVDISVPESPVTLNLPLTEP
SESKTSPEGTLDINNHCPRLSGNRRQRAVRKYRPPAQGDTLTPDMGPRPRRPRHRELHTD
ARGKETQLGDGGVDSREQRPGNDRDENDLKNDGEISPDGRVLEQRQNKPDNSESSETKPA
NSPHKSPPQDSEPATLQLTDSTLQQSPQATLSSGETDNNNHGCLNQDKSSLNTSIVIEVT
DTQPSMELTSITGNSKDVEASKTEKEEETPDAPKAPPPVSMFIFKPNNPVRRACHYIVNL
RYFEMSILLVIAASSIALAAEDPVNTNSDRNKVLRYFDYVFTGVFTFEMIIKMIEQGLIL
HDGSYFRDLWNILDFIVVVGALVAFALTNVMGSNTGRDIKTIKSLRVLRVLRPLKTIKRL
PKLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLFKGKFYYCTDSSKDTEDECKGY
YIDYDKDKKKEKREWKRRDFHYDNIIWALLTLFTVSTGEGWPQVLQHSVDVTEEDRGPSQ
GNRMEMSIFYVIYFVVFPFFFVNIFVALIIITFQEQGDKMMEECSLEKNERACIDFAISA
KPLTRYMPQNRQTLQFRLWHFVVSPVFEYTILTMIALNTLVLMMKHHDPIDGYDNVLKYF
NTVFTVIFTVECVLKILAFGIMNYFRDTWNIFDFITVLGSITEIVVDKVHTAKSFNMGFL
KLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLN
PKSHINEHNNFKTFFGALMLLFRSATGESWQEIMLSCLGEKECEKDESLNNSTTNEKKDC
GTEFAYFYFVSFIFFSSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRIWGEYDRA
ACGRIHYTDMYEMLTCMSPPLGLGKKCPSKVAYKRLVLMNMPVDEDMSVHFTSTLMALIR
TALDIKIARGGEDRGQMDIELQKEISVIWAHLSQKSLDLLVPIHKASDMTIGKIYAAMMI
MDYYKQNKAKKLRQQLEEQKHAPMFQRMDASSLPQDILCSAKALPFLSHSAGSALSRGGF
VALSPISPQDLFMQPLAQDSMEERDEYQYQHQYHLQSMVPEHKEFSSALCPTSMQVDPLQ
VPGRGISIRASSMPRLAIEPQQVSTESKLMKRSFSTIGDQCVNGDWQEEFSLERVSPDRL
ERPRQRSFRAVRSNLREPVDKERGRSKERRHLLSPDVSRCNSEERSQSQERRHSQSPSEG
RKHTTLRQGNSSGSPVPSTSDSGTPRGRRQLPQTPSRPRPHISYSPLVCRAQPTQGEVRA
RAQPAEEGEEPTGTRPGTAMAHSTPHRYISEPYLPLQEDVNSPNSSGVKETLTFEAAMAT
SLGCSNTISSAPQLRHTWQVPNGHFRKRLAQAKSGTSGCELLSDTDEDDRC
NT seq
7356 nt
NT seq
+upstream
nt +downstream
nt
atgttggaattgggcacttgttcggtcagcgctcagaccctctctgaccgcaatgccctg
gcagtcccgtctttcagtcagggcatgtgtggcgggagcccgccttcgcaatgtttcctc
ctccagcctcagcatccagagagctggctcaagcaccggggaaccctggaggatggatcc
cgctcctgttcgctcctggagccccagagcctgggtgacagcttcctgtcccatgcatcc
agtttcgacacgctctacgccccccacacccgtcccatgggtctggcgccatcctccctg
gatctcggagggttgtgcaagggggcggcagcgttgggtctggaccccgacatgcccgtc
agcccgaatatcattaaacggcgcagggggggactcattgaacaacgggacatcattaaa
gcacaccaggcacacaagatccagagcaccccacaggcccggcgcaaggaatgggaaatg
gctcgcttcggagacgatgttcctggtctgctgggagccggggatgggggttcggagcgc
agtcggaaccgggatgcaccggcggtatccacaggtggagtttcaccagccttcaaacag
accaaagcgcaacgagcccgaaccatggctctgtacaaccccattccggtccgacagaac
tgcttcaccgtcaacagatcgctcttcatctttggagaggacaacatcgttaggaagtat
gctaagaagatcatagaatggcctccgtttgaatatatgatcctggccaccattatcgcc
aactgcatcgtcctggccttggagcagcacctgcctggagaggataagacacccatgtca
aagagacttgaaaaaacagagccctactttataggaatgttttgctttgaagctggaata
aaaatcatcgctttgggatttgtattccacaagggctcgtacctgaggaccggctggaac
gtcatggacttcattgttgtcctaagtgggattctggccacagcaggccaccacatgaat
atttcattagacctgcgcacgctcagggctgtgagggtattacggccccttaaactggtt
tctggcattcctagtctgcaaatagttcttaaatccataatgaaggcaatggtgccactg
ctacagattggtctgctgctgttttttgccattctcatgtttgctattattggattagag
ttctacagtggaaaactccacaaaagatgcgtagctttttcaaacattacagactctgag
agagcagactcatcagaacttgacttcccgtgtggggccaagccttgtcctgaaaattat
aactgcactggcccctggcaaggacccaatgatggcatcactcagtttgataacatctta
ttttccatactcactgtattccagtgcatcaccatggaaggctggacagctgtactctat
aataccaacgatgcattaggctgtacttggaattggctctacttcattcctctaataata
attggctccttctttgtgttgaatctggtattaggagtcctgtcaggggagtttgctaaa
gagcgagagcgggtagagaaccgaagatccttcatgaagctcaggagacagcaacagatc
gagagggagctgaacggataccgggcctggatcgaccgtgcagaggaggtgatgcttgca
gaggagaacaagaattcaggaccttctgctttggatgtgctaaaaagagccaccacaata
aagagaagaggggtggatgatgttcggagagctccagaggaacagtatgctgacatatcg
tctgtagggatgccattgaacagagccagcatacgcagtgctaaaagaggaccaacgtcc
tttttccgtcggaaagaacgcatgctaaggatctctgttcgccgtatggtgaagactcac
accttctactggatcgttctgagtctggtggccctcaacactttctgtgttgccatcgtt
caccacaagcagcctcagtggttgtctagtctcctttactatgcagagttcctgtttctg
ggcctgtttcttacagagatgtttctcaagatgtatggacttggacccagactctatttc
cactcctccttcaactgctttgattttggcgtgatagtgggcagcatttttgaggtgctc
tgggggttcttcagacctggcacatcctttgggatcagcgttctgcgtgccttgcgattg
ttgagaattttcaagatcacaaagtactgggcgtccctgaggaacctggttgtgtctctg
atgagctccatgaagtctattatcagtttgctcttcctgcttttcctcttcattttggtc
tttgcacttctgggcatgcagctctttggtggaaggttcatctttgaagactacacaccc
actaattttgacacttttccagcagccatcatgacagtgtttcaaattctcactggcgag
gactggaatgaagtcatgtacaatggaatccggtctcaaggtggcgtgaaatcagggatg
tggtcatctgtctacttcattgttctgactctgtttggaaattatacactgctcaacgtc
ttcttggctatcgctgttgacaatttggccaatgcccaggagctcacaaaggatgaagag
gaggaggaagaggcgtttaatcagaaacatgccctgcagaaagccaaggaggttgggccc
atgtcctctttcatgtcctcagagaggaggaggaggccctacctgtacaggaagcgtgca
attcaccggagccgtgcggcctactcctttgaggattcagagagtctggctgatgctcgc
ccactcaatacctctaactctttcatgtccaggagagagagaaggaggagattgaccatg
tcagtttgggagcagaggaccagccagttgcgccgacacagacagatgtccagccgcgag
atccttttcagcagccccagtgaggagcacgatggaccacctggctgccatcaccacagg
aagcctggaatatctccatctaacagcatgcgcagagccatagaaaccacaacaaccacc
accatgccagaggcttccttggagccacctatgcctatggacatgcctgtggatgagcaa
gctctgtccattcctattcctgaaccccctttaactattccagtaccagagccaccaatg
cctgtggacatatctgtccctgaatccccagtgacgctgaacttacccctgacagaaccg
tctgaatcaaagacctcacccgagggcactctggacatcaacaaccattgccccagactg
agtggaaacaggcggcagagggcagtccgtaagtacaggcctcctgcgcaaggggacacg
ctgacccctgatatggggcccaggccccgacgcccacgccaccgggaacttcacacagat
gcaaggggtaaagagacacaactaggagatggtggtgttgacagtagagaacaaaggcca
gggaatgatagagatgaaaacgatttaaagaatgatggagagatcagtccagatggcaga
gtgcttgaacagaggcagaacaaaccagacaactctgaatcatcagaaaccaaaccagcc
aattccccccacaaaagcccacctcaggactcagaacctgcaactctgcagctcactgac
agcacactccagcagtccccacaggcaactttgagttccggcgagaccgataataacaac
cacggatgcttgaatcaggataagtcctctctcaacaccagcatcgttatagaggtcacc
gacactcagccttccatggagctgacctccattacgggtaatagtaaagacgtggaggcc
tcaaagacagaaaaagaagaggaaaccccagatgcaccaaaagcccctcctcctgtcagc
atgttcatcttcaaacccaacaacccggtccgcagggcctgccactatattgtcaatctt
cgttatttcgagatgtcaatccttcttgtgatcgccgccagcagtatcgccttggctgct
gaagaccctgtcaacactaattcagacaggaacaaagtgctgcgctattttgattatgta
ttcactggtgtcttcacatttgaaatgataatcaagatgattgagcagggattgatctta
catgatggctcctatttccgtgacctgtggaacattctggacttcatagttgtggtggga
gctctggtggcctttgctctcacaaatgtgatggggagtaacacaggaagagacattaaa
accatcaaatcactgcgtgttctcagagtattgaggcctcttaagactattaaaagactt
cccaaactcaaggccgtgtttgactgtgtggtcacatcgctaaaaaatgtcttcaacatc
ctcatcgtctacaagctctttatgttcatatttgcagtcattgcagtgcagcttttcaaa
gggaaattttactactgtaccgacagttccaaggacacagaagacgagtgcaagggttac
tacattgactatgacaaagacaagaaaaaggagaaacgagagtggaagagacgtgatttt
cattatgataacatcatctgggctctgttgactctcttcactgtatccactggggaaggg
tggccgcaagttttgcagcactctgtggatgtgaccgaggaggaccggggtcccagtcag
ggaaacagaatggagatgtccatcttttacgtcatttattttgtggtgtttcccttcttc
ttcgtcaacatatttgtggccctcatcatcatcaccttccaagagcagggtgacaaaatg
atggaggagtgcagtctggagaaaaacgagagggcttgcatcgactttgccatcagtgcc
aaacctttgactcgctacatgccccagaacagacagaccttacagttccggctgtggcac
tttgtggtgtctcctgtatttgaatacaccatactgacgatgatcgcccttaacaccctc
gttctcatgatgaagcatcatgaccctattgacggctatgacaatgtactaaaatacttc
aacactgttttcactgttattttcactgtggaatgtgttctcaagatcctggcatttggt
attatgaattatttcagagacacatggaatatatttgacttcatcacagttctaggaagc
atcactgaaattgtggttgacaaagtccacacagcaaaaagttttaatatgggcttcctg
aagttattccgggcagctcggctgattaaacttctgcgtcagggctacaccatccgtatt
ctgctttggacttttgtccagtctttcaaggctctaccatatgtctgtctgctaatcgcc
atgctgtttttcatctatgccatcattggcatgcaggtattcggcaacatcaagctaaat
ccaaaaagccatatcaacgaacacaataactttaagacattttttggtgcactcatgctg
ttgtttaggagtgcaacaggtgagtcatggcaggaaatcatgttatcgtgtttaggagag
aaggaatgtgaaaaagatgagtctctcaacaactcaacaacaaatgagaaaaaagattgt
ggtaccgagtttgcatacttctactttgtctccttcatcttcttcagttcttttctgatg
ctaaatctgtttgtggccgtgattatggataattttgagtacctgacacgtgactcgtcc
attcttggtcctcaccacttggatgagtttgtacggatctggggagagtatgaccgtgca
gcatgtggccgtattcattacactgatatgtacgagatgctgacctgcatgtcgccaccg
cttggcctgggcaagaaatgcccctccaaagtggcgtataagcggttggttctgatgaac
atgccagtggatgaagacatgtccgtccacttcacctccactcttatggccctgatacgc
accgcgctggacattaaaatcgctcgagggggtgaggacaggggtcagatggacatagaa
ttgcaaaaggaaatcagtgtcatctgggcacacctctcccagaaatctcttgatctgctt
gtacccatccacaaagccagtgacatgaccattgggaagatttatgcagccatgatgatc
atggactactacaagcagaacaaagctaagaagctccggcaacagcttgaggaacagaaa
catgcaccgatgttccaacgcatggatgcatcttcactgccacaggacattctctgcagt
gccaaagctctgccattcctgtcccacagtgcaggatctgccctgagtagaggtgggttt
gtggcactaagtcccatctcccctcaagatctcttcatgcagcccttggcccaagacagc
atggaagagagggatgaataccaataccaacaccagtatcaccttcagagtatggtgccc
gagcacaaagaatttagcagtgcgctgtgccccactagcatgcaggtcgatcctctgcaa
gtgccagggagaggcatctctatccgagcctcttccatgcctcgcctggcgatagagcca
cagcaggtgtctacagagagcaaactgatgaagcgctcattctccacgatcggtgatcag
tgtgtgaatggtgactggcaggaagagttctcgctggagagggtgagcccagacagactg
gaaagacccaggcaaagaagcttcagagctgtcaggtcaaacctgcgggagccagtggac
aaagagagaggacggtctaaagagcgaagacacctgctgtctccagacgtgtctcgctgc
aactcagaggaaaggagtcagtcccaggagagacgccactctcaatcacccagtgagggc
aggaagcacacgaccctcagacagggaaatagttcaggcagcccagttccttccacttct
gattcagggacgccacgagggcgccgtcaactcccacagacaccttctcggcctcggccc
cacatctcctactctccattagtgtgccgcgctcaacccacacaaggggaggttcgggca
cgggcccagcccgcagaggaaggggaggaaccaaccgggacgaggccaggcaccgccatg
gcccactccacccctcaccgctacatctcggagccatacctgccactgcaggaggacgtt
aacagtccgaactcaagtggtgtaaaggagactctcacttttgaggctgccatggcaacc
agcctgggatgctccaacaccatcagctccgctccacaactacgtcacacctggcaggtg
cctaacggacatttccgtaaacgactagcacaagccaagtcggggacgtcaggctgcgag
cttctcagtgacactgatgaggatgaccggtgttag
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integrated database retrieval system
