KEGG   Sinocyclocheilus grahami (golden-line barbel): 107599157
Entry
107599157         CDS       T04918                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase epsilon catalytic subunit A-like
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03030  DNA replication
sgh03410  Base excision repair
sgh03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    107599157
   03410 Base excision repair
    107599157
   03420 Nucleotide excision repair
    107599157
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sgh03032]
    107599157
   03400 DNA repair and recombination proteins [BR:sgh03400]
    107599157
Enzymes [BR:sgh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     107599157
DNA replication proteins [BR:sgh03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    107599157
DNA repair and recombination proteins [BR:sgh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      107599157
SSDB
Motif
Pfam: POL2_thumb DNA_pol_B_exo1 DUF1744 DNA_pol_B DNA_pol_B_exo2 RNase_H_2 APP_N
Other DBs
NCBI-GeneID: 107599157
NCBI-ProteinID: XP_016146157
LinkDB
Position
Unknown
AA seq 1655 aa
MVLQNSGRYKADRGGGDQDNQQDDASALSAVKRLERSQFTDGMDERFGFERMKEPGEKTG
WLINIHPTEILDDDKRMISAVDYYFIQEDGNRFKIALPYKPYFYIATKKNCEREVISFLS
KKFLGKVAKLEVVPKEDLDLPNHLVGLKRNYIKLSFNTVDDLVKVKREISPAVRKNRERE
KSNDAYTSMLSSALVGGSVVTEDEDGTWKKITEQLDNIVDMREYDVPYHVRVSIDLKIHV
AHWYNVRYRGSAYPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMLSYMI
DGQGFLITNREIVSEDIEDFEFTPKPEYEGPFTVFNEPDEASLIQRWFEHIHETKPNIFV
TYNGDFFDWPFVETRATQLGLSMHREIGFQKDNQGEYKASQAIHMDCLRWVKRDSYLPVG
SHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYLYMKYVHPFIFA
LCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIVFPNKQEQVFNKLTDDGHVLDSETYV
GGHVEALESGVFRSDIPCRFKMNPAAFDFLIQRVERTLRHAIEEEEKIPLEQVTNFNEVC
DEIKRKLISLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPG
ANCQRRMTWQWRGEIMPASRSEFHRIQQQLESEKFPPLFPNGPPRAFHVLNREEQARHEK
KRLGDYCRKAYKKVHLTRLEERVTTICQRENSFYVDTVRAFRDRRYEFKGFHKVWKKKLS
TAQDNGDAAEVKRCKNMEILYESLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGA
NIITQARELIEQIGRPLELDTDGIWCVLPNTFPENFVIKSTNEKKAKVTISYPGAMLNIM
VKEGFTNHQYQELVDPASLTYETRAENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFN
EDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLEEVYASVAKVADYWLDVLYSK
AANMPDAELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYVI
SRKPEGSPVTERAVPLAIFQAEESVKKHFLRKWLKMPSLHDLDIRSILDWGYYIERLGSA
IQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFTSEGKRQVAHQTL
PAGETPDMEDFGAPQHPVQPAILISTKRKRISQGEDSQAESQEQELTQSWREILGPPPVM
GTTREELLVWLRYHKKKWELQLRQRKERRKRRRLIGESQPTGGGVIRGGPTTGLGSFLRR
TACSILDMPWQIVQIAETSHPGFYKLWAVIGSDLHCMKLNIPRVFYVNQKVPKQEEGANC
KKVNRILPRSGVVYYLYQYAVPEDMYQEHINEINADLSAPDIEGVYETQVPLLFRALVQL
GCMCMVNKQVVRDLAGREADTFDLXHLEMRSLAQFSYLEPGSVRHIYLYHHSQGHKALFG
LFIPSQRKASIFVLDTVRSNQMPNLSSLYGAERAALLEKTTEELLPPEKHLFEVRAENDV
KAIYRTLQRILLNYKEERRGPTLIAVQSNWELRRLTAGMTVLEEFPVVPVHVIDEISYNV
LDWQRHGARRMIKHYLNLDSCLSQAFDMARYITHF
NT seq 4968 nt   +upstreamnt  +downstreamnt
atggttttacaaaacagtgggcgatataaagcagaccgaggtggtggagatcaggacaac
cagcaggatgatgcatcagctttgtccgccgtcaagcggctggagcgcagtcagttcact
gatgggatggacgagcgctttggcttcgaacggatgaaggaacctggggagaaaacggga
tggctgatcaacatacacccgactgagattctggatgatgacaagcggatgatcagtgct
gtggactattacttcatacaggaggatggaaaccgattcaagattgctcttccctataag
ccgtatttctacatagccactaaaaagaactgtgaaagagaggttatctccttcctgtca
aagaagttcctgggaaaagtggcaaagcttgaagttgtcccaaaggaagacttagatctg
cctaatcacctggtgggcctgaagaggaattacatcaaactctcttttaacacggtggat
gaccttgttaaagtgaaaagggagatctcacctgctgtccgcaagaacagagagagagag
aagtccaatgatgcctataccagcatgttatccagtgctttggttggtgggagcgtagtg
acagaggatgaggatggcacttggaagaaaattactgagcagcttgacaacatcgtagac
atgcgggaatatgacgtgccttatcatgtccgcgtttctattgacctgaagattcatgtg
gctcactggtacaatgtgcggtacagaggaagtgcctatcctcctgagattgtgcgcagg
gatgatcttgtggaaagacctgatcctgtagtgttggcttttgatattgagaccactaaa
ctcccactgaagtttcctgatgctgaaacagaccagattatgatgctatcatacatgata
gatgggcagggcttcctcatcacaaacagagaaatagtctctgaagacattgaggacttt
gagttcaccccaaaacctgaatatgagggccccttcactgtatttaatgaacctgatgag
gcctctcttattcagagatggtttgaacacatccatgagaccaagccgaacatttttgtc
acttacaatggagatttctttgactggccatttgtagaaaccagagcgacccagcttggc
ttaagtatgcatcgggagatcggcttccagaaggacaatcagggggaatataaagccagc
caggctattcacatggactgcctcaggtgggtaaagagagacagttacctgccagtagga
agtcataacctcaaggctgcagcgaaagctaagttaggctatgaccctgtagagctggac
ccagaggagatgtgtcgtatggctactgaagaaccacagactctggccacctattcagtg
tctgacgctgtggccacatactacctttacatgaaatatgttcatcccttcatttttgcc
ctctgcaccataattcctatggaacccgatgaggttttgcggaaaggctccggtaccctg
tgcgaggccttgctgatggttcaggccttccatgccaacattgtcttcccaaacaagcag
gagcaggtctttaacaaactcacagatgatggtcatgtacttgactctgagacttatgtt
ggcggccacgtcgaggctctagagtctggtgtgtttcgtagtgatatcccgtgccgcttt
aaaatgaatccagcagcatttgacttcttgattcagagggtggagcgtactctccgtcat
gcaattgaagaagaggagaagattccccttgagcaggtcaccaactttaatgaggtgtgt
gatgaaatcaagaggaagcttatctctctaaaggaagtgcccaatagaatcgagtgtcct
cttatttaccatctggatgtgggggccatgtaccccaacatcatccttaccaacagacta
cagccctctgccatggtggatgaggcgacctgtgccgcctgtgattttaataaacctggt
gcaaactgtcagcgcagaatgacttggcagtggagaggagagatcatgcctgcgagtaga
agtgagtttcatcgcattcagcagcaactggagtccgagaagtttccccctctctttcct
aatggtccacctcgtgctttccatgtgctcaacagagaagaacaagctcggcatgagaag
aagcgtttgggagattactgtcgaaaagcctataagaaggttcacctgaccagactggag
gagagagtcactaccatttgccagagagagaactctttttatgttgacacagttcgagcc
ttcagagaccgtcgatatgagttcaaaggattccacaaggtgtggaagaagaagctgtcc
acagcacaggataatggggacgcagcggaggtgaagcgctgcaagaacatggagattctc
tatgagtctctgcaactggcgcacaagtgtatcctcaactccttctacggatacgtcatg
agaaaaggagcacgttggtactcgatggagatggcagggattgtctgtttcaccggtgcc
aacattatcacacaggccagagaactcattgagcagattgggaggcctctggagttggac
accgatggtatttggtgtgttcttcccaacacctttcctgagaactttgtcataaaatcc
accaatgagaagaaggcaaaggtgaccatcagttatccaggagccatgctgaacatcatg
gtgaaggagggcttcacgaatcatcagtatcaagagctggtggacccagcatctttaaca
tatgagaccagagctgagaacagtatcttctttgaagttgatgggccgtacttggctatg
atcctgcctgcctctaaagaagaaggaaaaaagctaaagaaaaggtatgccgtgtttaac
gaggacgggtcgcttgctgagctgaagggctttgaggtgaagagaagaggagaacttcaa
ctcataaagatcttccagtcatctgtgtttgaggccttcctgaaaggcacaactctagaa
gaggtttatgcctctgtggctaaagtggctgactactggcttgatgtgctctacagcaag
gctgctaacatgccagatgcagagttgtttgagctgatttcagaaaaccgctccatgtcc
cgtaagctggaagattatggcgaacagaagtccacctccatcagcacagccaagcgtctt
gccgagttccttggcgatcagatggtgaaggacgctggcctcagctgtcgctatgtcatc
tcccgcaaaccggagggctcgcctgtcactgaaagggcggtccctctggccatttttcag
gctgaagagagtgttaaaaagcatttcctacgcaaatggctgaagatgcccagtctccat
gaccttgatattagatctattctggactggggttactatattgagcggttgggcagtgcc
atacagaagatcatcactatccctgcagctctacaacaggtgaaaaatccagtaccccga
gtacggcatccagactggctgcataagaagcttctggaaaagaatgacatctacaagcag
aagaagatcagtgagctctttaccagtgagggaaagagacaggtggcccatcaaacgtta
ccagcaggtgagactcctgatatggaggacttcggtgctcctcagcatcctgtgcagccc
gccatactcatcagcacaaagaggaagaggatatctcaaggagaggacagccaggctgag
tctcaagagcaagaactcacacagtcttggagagaaatactggggccaccaccagttatg
ggcaccacccgggaggaacttcttgtctggttacgctaccataagaaaaaatgggagctg
cagcttcgtcagaggaaagaacggcggaagcgacggcgtttgattggggaatctcagccg
actggcgggggggtaatccgtggtggaccgacaacagggctaggcagcttcctgcgaaga
accgcctgcagtattctagacatgccctggcaaattgtacagattgcagaaaccagtcac
ccaggcttttataagctgtgggcggtcattggcagtgacctgcactgcatgaagctcaac
atcccacgagtgttttatgtcaatcagaaagtgcccaagcaagaagagggagctaattgc
aaaaaggtgaaccggatacttccacgctctggtgtggtgtattatctgtatcagtatgct
gttcctgaggacatgtaccaggaacacatcaatgagatcaatgctgacctctcagctcct
gatattgagggtgtctatgagacacaggttccgctgctgttccgggctctggtccagttg
ggctgcatgtgtatggtcaataaacaggtggtcagagacctggctggcagagaggctgat
accttcgacctgtagcacctagagatgagatccctggcccagttcagctacctcgagcca
ggcagtgtaaggcacatctacctgtaccatcacagtcagggccataaggctctctttggc
ctcttcataccatcccaacgcaaagccagcatttttgttctcgacacggtgcgcagtaat
cagatgccgaaccttagctcattgtacggagcagagcgcgcagcacttctggagaagacc
acagaggagctgctgccacctgagaaacatctgtttgaagtgcgtgctgaaaacgacgtc
aaagccatctaccgcacactgcaacgcattctcctcaactacaaggaggagcggcgtggt
ccgaccctgattgctgttcagtctaactgggagttgcggcggctgacagctggcatgact
gtactggaggagttcccggtggtcccggttcatgttattgatgagataagttacaatgta
ctggactggcagcggcacggagctcgacgcatgataaaacactacctgaacctggacagc
tgtctctcacaagcttttgatatggccaggtacatcacacacttttga

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