Sinocyclocheilus grahami (golden-line barbel): 107599362
Help
Entry
107599362 CDS
T04918
Name
(RefSeq) neurogenic locus notch homolog protein 1
KO
K02599
Notch 1
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
107599362
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
EGF_2
Ank_2
Ank
Notch
NODP
NOD
Ank_3
Ank_5
Ank_4
EGF_3
cEGF
Gram_pos_anchor
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
107599362
NCBI-ProteinID:
XP_016146414
LinkDB
All DBs
Position
Unknown
AA seq
2447 aa
AA seq
DB search
MNRFLVKLTLLTAASLATVAQGQRCSEYCQNGGICELKPSGEATCRCPADFVGPQCQFPN
PCSPSPCRNGGVCRARTQGNDVELTCDCVLGYSGPLCLTPVNHACMGSPCRNGGTCSLLT
LETFTCRCSPGWSGKTCQQADPCASNPCANGGQCSAFDSHYICTCPPNFHGQTCRQDVNE
CALSPSLCRNGGTCKNEVGSYLCHCPPEYAGTHCERLYHPCHPSPCRNGGTCLQTSDTTY
ACTCLPGFTGQTCEHNVDDCTQHACENGGRCIDSVNTYNCHCDKHWTGQYCTEDVDECEL
SPNACQNGGTCHNTIGGFHCVCVNGWTGDDCSENIDDCASAACSQGATCHDRVASFFCEC
PHGRTGLLCHLDDACISNPCQKGSNCDTNPVSGKAICTCPPGYTGSACNQDIDECSLGAN
PCEHGGRCLNTKGSFQCKCLQGYEGPRCEMDVNECKSNPCQNDATCLDQIGGFHCICMPG
YEGVFCQINTDDCASQPCLNNGKCIDKINSFHCECPKGFSGNLCQVDVDECASTPCKNGA
KCTDGPNKYTCECTPGFAGAHCELDINECASSPCHYGVCRDGVATFTCDCRPGYTGRLCE
TNINECLSQPCRNRGTCQDRENAYTCTCPKGTTGMNCEINIDDCKSKPCDYGKCIDKING
YECVCEPGYTGSMCNINIDDCALNPCHNGGTCIDGVNSFTCLCPEGFRDPTCLSKHDECS
SNPCIHGNCLDQINSYRCMCEAGWMGRDCDININECLSNPCVNGGTCKDMTSGYVCTCRA
GFSGPNCQTNINECASNPCLNQGTCIDDVAGFKCNCMLPYTGEVCESVLAPCTQRPCKNG
GVCRESEDFQSFSCTCPAGWQGQTCEVDINECVRNPCTNGGVCENLRGGYKCRCIPGFSG
DLCQNDIDDCTPNPCSNGGVCQDRVNGFVCVCLAGFRGERCAEDIDECVSAPCRNRGNCT
DCVNSYTCSCPVGFSGINCEINTPDCTESSCFNGGTCVDSINSFSCVCLPGFTGNYCQHD
VNECDSRPCQNGGTCQDGYGTYKCTCPHGYTGLNCQSLVRWCDSAPCKNGGSCWQQGASF
TCQCASGWTGIYCDVPSVSCEVAARQQGVSVAVLCRNAGQCVDVGNTHLCRCQAGYTGSY
CQEQVDECMPNPCQNGATCTDYLGGYSCECVPGYHGVNCSKEINECLSQPCQNGGTCIDL
INTYKCSCPRGTQGVHCEIDVDDCSPAVDPLTGEPRCFNGGRCEDRVGGYGCVCLAGFVG
ERCEGDVNECLSDPCDPNGSYNCVQLINDFRCECRTGYTGKRCETVFNGCKDTPCKNGGT
CAVASNTKHGYICKCQPGYSGSSCEYDAQSCGSLHCRNGATCVSGHLSPRCLCLPGFSGH
ECQTRMDSPCLNNPCYNGGTCQPINDAPFFRCSCPTNFNGLICHILDYSFKGGQGRDIAP
PPEVEIRCEIAQCEGRGGNAICDTQCNNHECGWDGGDCSLNFDDPWQNCSAALQCWRYFN
DGKCDEQCANAGCLYDGFDCQRLEGQCNPLYDQYCRDHYADGHCDQGCNNAECEWDGLDC
ADDVPQKLAVGSLVLVVHIPPDDLHNRSSSFLRELSGLLHTNVVFRRDANGEPLIFPYYG
NEHELSKHKRSDWTDPAQLQQRARRSLTVFMKPRLRRELDQMEIKGSIVYLEIDNRQCYQ
QSDECFQSATDVAAFLGALASSGNLNVPYIIEAVTSEDAPSKTGEMYPMFLVLLALAVLA
LATVGVVVSRKRKREHGQLWFPEGFKVTEPKKKRREPVGEDSVGLKPLKNSDSSLMDEQL
SEWAEDDMAKRFQFEEQSILDMSGQLDHRQWTQQHLDAADLRLNSMAPTPPQGEIENDCM
DVNVRGPDGFTPLMIASCSGGGLENESVEGEDDPSADVMCDFIYHGANLHNQTDRTGETA
LHLAARYARSDAAKRLLESCADANVQDNMGRTPLHAAVAADAQGVFQILIRNRATDLDAR
MHDGTTPLILATRLAVEGIVEELVNCHADPNAIDDSGKSALHWAAAVNNVDAAVVLLKNG
ANKDLQNNKEETPLFLAAREGSYETAKVLLDHLANREIADHLDRLPRDIAQERMHHDIVR
LLDEYNLVQSPALPLSPPLCSPNTYLGIKPSPGSANNMAKKARKPGGKGVGGKDSGKDMR
MKKKKSGEGKNGGIIEVGILSPVDSLESPHGYLSDVSSPPMMTSPFQQSPPITLNQLQGL
ADSHMGGALQSLGKQFDSAPPPRLSHLPVPNNGGGAQTAACDWLQRVQHQQQQAGFTTLI
PTMLSATNMPQVMGYPTMQSSHLGAPSHMIPNHAHQNMPHMQHQNSTTSGHALSHHFLGD
LSGLDLQSGSGHAPIQTILSQESQRMAPPISSTQFLTPPSQHSYSNPMDNTPSHQPQIPD
HPFLTPSPGSPDQWSSSSPHSNVSDWSEGISSPPTSMQMNHIPEAFK
NT seq
7344 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgtttcttggtgaaattaacgctactgacggcagcatcgctcgcgacggtggca
caagggcaaagatgctcagaatactgtcagaatggaggaatatgcgagctcaagccgagc
ggagaagcaacatgcaggtgtcctgcagacttcgtcggcccccaatgccagttcccgaac
ccgtgcagcccgtcgccgtgtcgtaacggaggcgtgtgtcgcgcgcggacgcagggcaat
gacgtggagctgacctgcgactgcgtgctgggatacagcggtccgctctgtctgacgcct
gtcaatcatgcatgcatgggctccccgtgccgaaacggagggacgtgttctctgctcacg
ctcgagacctttacctgccgctgctcacctggatggtcaggtaaaacatgccagcaggcc
gacccgtgtgcatcgaacccctgtgcaaacggcggacagtgttcagcatttgactcgcac
tacatctgcacctgccctcctaacttccacggccagacgtgtcggcaggacgtgaacgag
tgcgccctctcgccctccctctgccggaacggaggcacttgtaaaaatgaggtgggctcg
tacctgtgccactgcccacctgagtacgccggcacacactgcgagcgcctctaccacccc
tgccacccctcgccctgcaggaacggaggcacctgcttacagaccagcgacaccacctat
gcctgcacctgtctgccagggttcacaggtcagacgtgtgagcataacgttgacgactgc
acccagcatgcctgtgagaatggaggcagatgtatcgacagcgtcaacacctacaactgc
cactgcgacaaacactggaccggtcagtactgtacggaggacgtggacgagtgcgagctc
tctcctaacgcttgtcagaacggaggaacgtgtcacaacaccatcggcggcttccactgc
gtgtgtgtgaacggctggacgggcgacgactgcagcgagaacatcgacgactgcgccagc
gccgcctgctcacagggtgccacctgccacgatcgagtcgcgtctttcttctgcgagtgt
ccacacggacgcacaggtcttctgtgtcaccttgacgacgcctgcatcagtaatccgtgt
cagaaaggctcaaactgcgacacgaacccggtgagcggaaaagccatctgcacctgtccg
cctgggtacacgggatcggcctgcaaccaagacattgacgagtgctcgcttggcgcaaac
ccgtgtgagcatggcggacggtgtctcaacactaaaggctccttccagtgcaagtgtctc
caaggttatgaaggcccacgctgcgaaatggatgtcaacgagtgcaagtcaaacccctgc
cagaacgacgccacctgcctcgaccagatcggtggattccactgcatctgcatgccaggt
tacgagggtgtgttttgtcaaataaacaccgatgactgcgcatcacagccttgcctcaac
aacggaaaatgcatcgacaagatcaactcgttccactgcgaatgccccaaagggttctct
gggaatctgtgtcaggtggatgtggacgagtgcgccagcacaccgtgtaaaaatggcgct
aaatgcacagacgggccgaacaaatacacctgcgaatgcactccagggtttgctggcgct
cactgtgagctggacataaacgagtgtgcgtcgagcccttgtcattacggcgtgtgtcgg
gacggtgtggccacttttacctgtgattgtcgccccggatacaccggccgcctgtgcgag
accaacataaacgagtgcttgagccaaccctgccgaaacagaggcacctgccaggacaga
gagaacgcatacacctgtacctgccctaaaggaaccacaggaatgaactgcgagattaac
attgacgactgcaagagtaaaccgtgtgactacggaaagtgcatcgacaagatcaacggc
tacgagtgtgtgtgtgaacccggatacacaggctcaatgtgtaacatcaacattgacgac
tgcgcattaaacccgtgtcacaacggcggcacctgcattgacggcgtcaacagcttcacc
tgcctctgtccggagggtttccgtgaccccacctgcctctccaaacacgacgagtgctcc
agcaacccttgtatccatggcaactgcctggaccagatcaacagctacagatgcatgtgc
gaggccggctggatgggacgcgactgcgacatcaacatcaacgagtgcttgtccaacccg
tgcgtgaacggaggcacctgtaaggacatgaccagcggctacgtgtgcacctgcagagcc
ggcttcagcggtcccaactgccagacaaatattaacgagtgtgcgtccaacccctgccta
aaccagggcacctgcatcgacgatgtggccggattcaagtgcaactgcatgctgccttac
accggcgaggtgtgtgagagcgttttggctccctgcactcagcgtccatgtaagaacgga
ggcgtttgtcgcgaatcggaggattttcagagcttctcttgcacttgtcctgctggatgg
caaggtcagacgtgtgaggtggacattaacgagtgtgtgaggaatccttgcactaatgga
ggagtgtgtgagaacctgcgtggaggatataagtgccgctgcatccccggattcagtgga
gatctgtgccagaacgatattgacgactgcacgccaaatccgtgcagtaacggcggtgtg
tgtcaggaccgtgtgaacggctttgtgtgtgtgtgtttggctggtttccgtggtgagcgc
tgtgcagaggacatcgacgagtgtgtgagcgccccctgccgaaacagagggaactgcacc
gactgcgtcaacagctacacctgcagctgtcctgtaggattcagcggcatcaactgtgag
atcaacacacccgactgcactgagagctcatgttttaatggaggaacatgtgtggacagc
ataaactcgttctcatgcgtgtgtttgccgggattcaccgggaattactgccagcatgac
gttaacgagtgcgactcgcggccgtgccaaaacggaggcacatgtcaggacggatacggc
acctacaaatgcacctgcccacacggatacaccggactcaactgccagagtctggtgcgc
tggtgtgactcggccccctgtaagaacggtggctcatgttggcagcagggggcgtccttc
acctgccagtgtgccagcggctggaccggcatctactgtgacgtccccagtgtcagctgt
gaggtcgccgccaggcagcaaggagtgtctgtggctgttctgtgtcgtaacgcgggtcag
tgtgttgacgtgggtaacacacacctgtgcagatgtcaggccggatatacaggcagctac
tgtcaggagcaggtggacgagtgcatgccgaacccctgccagaacggagccacctgcacc
gattacctgggaggatacagctgtgagtgcgttcctggatatcacggagtcaactgcagc
aaggagataaacgagtgtctgtctcaaccctgtcagaacggaggaacctgcatcgacctc
atcaacacgtacaaatgctcctgtccacggggaacgcaaggcgttcactgtgagattgat
gtcgatgactgttccccggccgtggatccgttaaccggcgagccgcgctgttttaacggc
ggccgctgcgaggaccgtgtgggaggttacggctgcgtgtgtctggctggttttgtgggc
gagcgctgcgagggcgacgtcaatgagtgcctgtctgacccctgtgaccccaacggatcc
tacaactgcgtacagctcatcaacgacttccgctgcgagtgccgtacgggatacactggt
aagcgttgtgaaactgtgttcaatggttgcaaggacacaccatgcaaaaatggaggaacg
tgtgctgtagcgagtaacaccaaacacggatacatctgcaagtgtcagccgggttactct
ggctcctcctgcgaatatgacgcccagtcctgcggctccctgcactgtcgtaacggtgct
acctgcgtctcgggacacctgagtccccgctgtctctgcctgccgggcttcagcggacat
gagtgccaaacacgcatggactcgccctgcctcaacaacccctgctacaatggcggcacc
tgccaacccatcaacgacgccccgttcttccgctgctcctgccccaccaacttcaacgga
ctcatctgccacatccttgactactccttcaaaggagggcagggccgagacatcgcccct
ccgccggaggtggagatccgatgtgaaatcgctcagtgcgaaggcaggggtggaaatgcc
atctgtgatacccagtgtaacaatcacgagtgcggatgggacggcggcgactgctctctg
aatttcgacgacccgtggcagaactgtagcgcagccctgcagtgctggaggtacttcaac
gacgggaaatgcgacgagcagtgcgccaacgctggctgcctgtatgatggcttcgactgc
caaagactggaggggcagtgcaatccgctgtatgatcagtactgtagagatcactatgcg
gatggtcactgcgatcagggctgtaataacgccgagtgtgaatgggacggtctggactgc
gccgatgacgttcctcagaaactggctgtgggaagtctggttctagtggtccacatccca
ccagacgatcttcacaaccgctcctcgtctttcctccgcgagctgagtggactgctgcat
accaacgtggtgtttcgccgtgacgctaacggagagccgctcattttcccgtactacggc
aacgagcacgagctgagcaaacacaagcgctctgattggacggacccggctcagctgcag
cagcgtgccaggaggagcctgacggtgttcatgaagccccgcctgcgacgggaactggat
caaatggagatcaaagggtccatcgtctatctagagattgacaaccgtcagtgttaccag
cagtctgacgagtgtttccagagcgcgacggatgtggcggctttcctcggagcgctggcc
tctagcgggaatctcaatgttccttacatcatcgaggccgtcacaagtgaggatgcccct
tcaaagacaggagagatgtaccccatgttcctggtgctgctggcgctggcggttctggcg
ctggccactgtgggcgtcgtggtctccaggaagaggaagagggaacatgggcagctttgg
ttcccagagggatttaaagtcacagaacccaaaaagaaacgaagggaaccagtcggagag
gattctgttggactcaagcctctgaaaaactctgacagctctttgatggatgaacaactg
agcgaatgggcagaagacgacatggctaaacgattccagtttgaggagcagtccattctg
gacatgagcggtcagctggatcaccggcagtggacgcagcagcacctggacgctgctgac
ctgcgtctgaactctatggctccgactccaccgcagggcgagatcgagaacgactgcatg
gacgtcaacgtccgcgggcctgacggtttcactccgctgatgatcgcgtcgtgcagcggc
ggcggtcttgagaacgaaagcgttgagggagaagacgatccctccgctgatgtcatgtgt
gacttcatctaccacggggccaacctgcacaatcagacggaccggaccggcgagaccgcg
ctgcacctggctgcccgctacgcccgctcagacgcggccaaacgcctgctggagtcgtgc
gccgacgctaatgttcaggataacatgggtcgcacgcctctccacgccgctgttgctgct
gacgcacagggagtcttccagattctcattcggaaccgagcgacggatctggacgcccgc
atgcatgatggaacgactccgctgatcctggccacccgattggctgtcgagggaatagtg
gaagagctcgttaactgccatgcagatcccaatgctattgatgattctggtaaatcggct
cttcactgggcggctgcagttaataatgtggacgctgctgtcgttcttctgaagaatgga
gcgaataaagacctacagaataacaaggaggagacaccacttttcctggccgctcgtgag
ggaagttacgaaaccgctaaagtccttcttgatcacttggccaaccgtgagatcgcggat
cacctagaccggcttccacgcgacatcgcgcaggagcgcatgcaccacgacatcgtccgt
ctgttagacgaatacaacctggtccagagtcccgcgctgcccttatcgccccctctctgc
tcgccgaacacctacctgggcatcaaacccagcccgggcagtgccaacaacatggccaag
aaggcacggaaaccgggcggtaaaggcgtaggagggaaggacagcggaaaagacatgaga
atgaaaaagaaaaagagcggagagggcaaaaatggaggcattatagaagtgggcatcctc
tcgccagtcgattcgctggagtcgccgcacggttacctgtcggacgtctcgtctccgccc
atgatgacatcaccatttcaacagtccccgcccatcactttaaatcaactccaagggttg
gctgactcccacatgggtggagctcttcagagtttagggaagcagtttgactccgcccct
cctcctcgcttatcccatctgccagtgcctaacaatggaggcggagctcaaacagcggcg
tgtgattggctgcaaagagtgcagcaccagcaacagcaggcaggcttcacaaccctgata
cccacaatgctctctgccaccaatatgccacaggtcatgggctatcccacaatgcaaagc
agccacctcggcgccccatcgcacatgattcccaaccacgcccaccagaatatgccacac
atgcagcaccaaaacagcaccacctccggccacgccctctctcatcacttcctaggtgac
ctaagtgggctggatcttcagtccggctcaggacacgcccccatccagaccatcctatca
caggagagccagcgcatggctccgcccatttctagcacgcagtttctgactccgccttct
caacatagctattccaaccctatggacaacacgcccagtcaccagccgcagattcccgac
cacccgttcctcacgccctcccctgggtctcccgaccaatggtcaagctcgtctccacat
tccaacgtgtctgattggtcagagggcatctcaagcccgcccactagtatgcagatgaac
catatcccagaagccttcaagtag
DBGET
integrated database retrieval system
