KEGG   Sinocyclocheilus grahami (golden-line barbel): 107599392
Entry
107599392         CDS       T04918                                 
Name
(RefSeq) nucleoporin NUP188 homolog
  KO
K14311  nuclear pore complex protein Nup188
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    107599392
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sgh03019]
    107599392
Messenger RNA biogenesis [BR:sgh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     107599392
SSDB
Motif
Pfam: Nup188_N-subdom_III Nup188_N Nup188_SH3-like HEAT_SCC3-SA
Other DBs
NCBI-GeneID: 107599392
NCBI-ProteinID: XP_016146458
LinkDB
Position
Unknown
AA seq 1702 aa
MADSEMCVRSSRELWTILLGRSALREPAQIEAELDRNWERLLQGLSFYKPPSTSAADKLK
ADKDTPQALKDFGLRISKLLGLDEQQSVQILQCYLQEDYRATRNTLKAVLQDERQSQALL
LKIADYYYEERLCVLRCVLHLLTYFQDERHPYSAEYSNCVSKLEKDLVSNYRQQFESLSK
SEAPTWETHGNLMTERQVSHWFLQCLKEQALLLEILFLYYAYFEMPPNELSTFTRLFKEQ
GFGQRQTNRHLVGKSMDVLVERIGYFSSLILVEGMDIDFLHKCALEDRTEQHQFYDQQDI
CKEVDQMLLTFGDISHHGPVLLAWVLLRHTLRPEEVSSVIRRLGNTTLQLGVFQYLTNML
QALGSTGNNCTASTARMCIYGLLSFVITSFEEDTLGSQQHLINAACEVLAAPSLAEIFWE
SKPNMGLGVILDSAVGVFPYKTGPLLQLLTALLSDKSTAKKVYTFLDKTSFYTEAYKHKP
NDVISREDGTLWRRQTPKLLYPLGVGQTNLRMPQGCFGLVCEGKQLSVGEQGFLVRWEYS
YSSWTLFTCEIEMLLHVVSTADVLAHCERVKPILDLVHKIISTDWTVSDCLLPLTSRIYM
LLQRLTSVINPPVDVITSCVNCLIALAARQPGKVWSSLHHTGFLPFAATPLTNMAQTISA
EGMKAGNYGNLLVLIEQPRGEYSVTIAFLRLVTTLVKGQLGSTQSRGLIPCVLLVLKEML
PTYHKWRYNTYGVRERIGCLILELVHAILNLSQEVESEGSAPSLQSLCIYSLANTEAGQA
VVNIMGVGVDTINMVLAAQPSSGGSEGPGQVLIQTVKLAFSVTNNVIRLKPHSDTASPLE
QALTQHGGHGNNLIAVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGSDAAAIR
DAFLTRLQSRTEDMRIKVTILEFLTVAVETQPGLIELFLNLETKDGSDGAKEFSLGEWSC
LSVVLELLDSKQQGKYWCPPLLHRAALAFLHALWQDRRDSALSVLRTKEKFWENITTPLF
GNLPPPSETTEPCVLESCAFVMKIIALEIYYVVSGVLDPCLKAALENFSSKRRYEFWSDY
VRDLVCVACDGEEEGLRSLSESQMLISAWRTLLILSTSHSEVMHLKDDTVRQKLFMDVLE
GTKAALLMSQSVFCLRLGSMMVTLLLILLKQWKSVLVSAPALLPPLSLMMESVLHAEQQL
TDRTKAKLLSALILALQIQGLNGGEITQLPQLLLCVCEMVQDEALALIDSTRHTIQRGDV
QEDSMETDSPHFQKDQQDSVCVLALHLSKELCRADEDGEQWLQVVRKLPVLPSVLSALEL
SLRSKQNLYFTEAALHLLLTLARTPQGAAAVAGAGVIQSICLPLLSVYEGPSNGATQAFV
RKSQDAPSWPGVYRLSLSLMESLLKTVRYNFINEALDFVGVHQERILQCLNAVRTVQSLA
CLDEADHTVGFLLQLSNFCKEWQFHLPQLLRDVQVNLCYLCQTCTYLLHSKKMLHHYLQA
KNGEGLPPGPHPQRVIQPAFKEQVEGEREEAESKALQAVQCSLLKILSKTLATLQHFTPD
CCQILLDQSMDLAEYRTLFVLSFTTPAFDSDVAPSFGTLMATINVALSMLGEIEKRKEPV
VVSEDTQALKSLLMFSMENCFYVLISQAVRCLKDPSVLPRDKQRLKQELSSELVSFSAGL
KKNLRYIKLLFNQINFILFSLL
NT seq 5109 nt   +upstreamnt  +downstreamnt
atggcggactcggagatgtgtgtcaggagcagccgagagttatggactatcttgctgggc
agatctgcacttcgagaaccggcccaaattgaggctgaattggatcggaactgggagaga
cttctgcagggtctgtccttctataaaccacccagcacatcggccgcagacaagctgaaa
gcagataaagacacaccacaagctctcaaagatttcggactcaggatcagcaaactgctg
ggtttggatgaacagcaaagcgtacagattcttcagtgttacctccaggaggactacagg
gccacacgaaacacactcaaggctgtgctgcaggatgagagacagagtcaagctctgctg
ctgaagatagcagattactattatgaagagagactgtgcgttctacgctgcgttctccac
ctcctcacctacttccaggatgagagacatccatacagtgcagagtactccaactgtgtt
agtaaactggagaaagatctggtgtccaactacaggcagcagtttgagtcgctgtccaaa
tcagaagctccaacatgggagacacatggaaacctgatgacggagaggcaggtgtcccac
tggtttttgcagtgtttgaaggaacaggccctgctgctggagatcttgttcctgtactat
gcatactttgagatgccgcccaatgaactttccaccttcacacggctgtttaaggagcag
ggctttggacagcggcagaccaatcgacaccttgtgggcaagagcatggatgtgctggtt
gaacgcattggctatttcagttctttaattcttgtggaggggatggatatcgactttctg
cataaatgtgctctggaagaccgaaccgaacagcatcagttttatgaccaacaggatatt
tgcaaggaggtggatcagatgctgttgacatttggtgacatttctcaccacgggccagtt
ctgttggcctgggttctgctgcgacacacactgcgtccggaggaagtgagctctgtgatc
agacgtctaggaaacacgacactacagcttggagtctttcagtatctcaccaacatgctg
caggcactcggcagcactggaaataactgtacagcgagcactgcgcggatgtgtatttat
ggtctcctgtcttttgtcatcacctcttttgaagaagacacactcggcagccaacagcat
ctgatcaatgcagcatgtgaagttcttgctgctccgagtctggctgagattttttgggag
tcgaagccgaacatggggctcggtgtgattctggacagtgcagtgggtgtgtttccatac
aagactggtcctttactacagctgctcaccgcactgctgtctgacaaatctacagctaag
aaggtgtataccttcttggataagacgtcattctacacagaggcctataaacacaaaccc
aacgacgtgatctccagagaggatggcactctgtggaggagacagactcccaaactcctc
tatcctctgggtgtaggtcagaccaacctgcgaatgcctcagggatgtttcggactggtg
tgtgaaggaaagcagctgtctgtgggtgaacagggtttcctggtgcgctgggagtattcc
tacagctcatggactctcttcacctgtgagattgagatgctgctgcacgtcgtctctact
gcagatgtgttggcacactgtgagcgagtgaagcccatcttggatctagttcataagatc
atcagcaccgattggacggtttctgactgtctgctgccactcacatcgcggatctacatg
ctgctacagaggttgacctccgttattaaccctccagtagatgtgatcacttcctgcgtc
aactgccttatcgctctagctgctcggcagcctgggaaggtttggtccagtctgcatcac
accggcttccttccatttgccgccacccctctgactaatatggcacaaaccatcagtgca
gagggcatgaaggcgggtaactatggcaacctgctggtgttgattgaacagcccagagga
gagtacagtgtgaccattgcctttttaagactggtgaccacactcgtcaagggtcagttg
ggcagtactcagagcagaggactcatcccgtgtgtgctgctggttctgaaagaaatgctg
cctacatatcataaatggcgctacaacacctatggagtgcgagagaggattggttgtttg
attctagagctggttcatgctattctcaatctgagtcaggaggtggagtcagagggcagc
gcccccagtctgcagtcgttgtgtatctacagtctggccaacacagaggcaggacaggca
gtggtcaacatcatgggtgtaggagtggacactatcaacatggtgctcgcagcacagcct
agcagtggtggttctgagggacctggtcaggttctgatccagacagtgaagttggcgttc
tcagtcaccaacaacgtgatccgactcaaaccgcattctgacacagcctcacctctggag
caagcactaacacagcacggtggtcacggcaacaacctgatcgctgtgctggcgaagtat
atttaccacaagcacgacccagcgctgccgcgacttgccatacagctgctgaagagactc
gccacggtggctcccatgtccgtttatgcttgcctgggcagtgacgccgctgcgatcaga
gatgcgtttctgacacgactgcagagcagaactgaagacatgcgtattaaagtcaccata
ctcgagttcctcaccgtggctgtggaaacgcaacctggactcattgagctcttcctcaac
cttgagaccaaagacggcagcgatggtgcaaaggagttttctctgggagagtggagctgt
ttgtcagtggtgttggagttgttggattctaagcagcaggggaagtattggtgtcctcca
ctcctgcacagggcagcactggccttcctccacgcgctctggcaggacagacgggacagc
gctctctctgtgctcaggaccaaagaaaaattctgggagaacatcacaactcctttattt
ggaaacttacctcccccatctgagacaaccgagccgtgtgttctggagtcttgtgccttt
gtgatgaagataatcgctcttgagatctactatgttgtcagtggtgtgttggatccgtgt
ctgaaagcggctctggagaatttcagcagtaagcgccgctatgagttctggtcggattac
gtgcgtgatctggtgtgtgtggcgtgtgacggtgaagaggagggtctgcgctctctgtct
gagtctcagatgctcatctcagcctggaggacactcttaatactctccaccagtcattct
gaggtgatgcatctgaaggatgacactgtcaggcagaagcttttcatggacgtgttggaa
gggaccaaagcagcgctgctgatgtctcagtctgtcttctgtctgcgtctgggatccatg
atggtcacgctgctcctcatcctcctcaaacagtggaaaagtgtgttggtgtccgctcca
gctcttctgccgcccctgtctctgatgatggaaagcgttctgcatgctgaacaacagctc
acggaccgaaccaaagccaaactcctgtcagctctcatcttagccctgcagatacaagga
ctcaacggaggagagattacccagcttccccagctgctgttgtgcgtgtgtgagatggtt
caggacgaagccctggcattgattgacagcacacgtcacacgatacagagaggtgatgtt
caggaggacagcatggagacagacagcccacatttccagaaagaccagcaagactcagtg
tgtgtgttagctcttcatctctctaaagagttgtgtcgggctgatgaggatggtgagcag
tggctgcaggtggtcaggaagctgccagttctgccgtcggttctcagcgctctggagctc
agcctgcgttccaaacagaacctttacttcacagaggcagcgcttcatctgctgctcacc
ctcgcgagaaccccgcagggggcagcagcggtggcaggtgccggagtgattcagagcatc
tgtcttcctctcctcagtgtgtatgagggaccatctaatggagccacgcaggcatttgtg
cgtaagtctcaggacgcccccagctggccgggtgtgtacagattgagtctgtctctgatg
gaaagtctgctgaaaactgtccgttacaacttcattaatgaagcgctcgactttgttggc
gtccaccaggagcgcatcctgcagtgtctgaacgcagtgaggacggttcagtctctggcg
tgtctggatgaggccgatcacacggtgggcttcctgctccagctctccaacttctgcaag
gagtggcagttccacctgccgcagctgctcagagacgtacaggtgaatctgtgctatctg
tgtcagacgtgtacatacctcctacacagcaagaaaatgctgcaccattacctgcaggcc
aagaatggggaggggcttccaccagggccacacccccagcgtgtcatacagcccgccttc
aaagagcaggtggagggtgagagagaggaggcggagtctaaagcgctgcaggcggttcag
tgcagcctgttaaagatcctcagcaaaactctggccacgttacagcacttcacacccgac
tgctgtcagatactgctggaccagtctatggatcttgcagagtacaggacgctgtttgtg
ttgagtttcaccactcctgcctttgactctgatgtggctccgtcgtttgggactctcatg
gccaccattaatgtggcgctgagcatgctgggagagattgagaagaggaaggagccggtg
gtggtctctgaggacactcaagcactgaagtctttgctgatgttctcgatggagaactgc
ttctatgtgttgatctctcaggctgttcgctgtctgaaggatccttcagttttgcccaga
gacaaacagagacttaaacaggagctcagctcagagctggtgagtttttcagcaggattg
aaaaaaaacttaagatatattaaattattatttaatcaaattaactttattttattttca
ttgctgtaa

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