KEGG   Sinocyclocheilus grahami (golden-line barbel): 107600221
Entry
107600221         CDS       T04918                                 
Name
(RefSeq) WD repeat-containing protein 48 isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    107600221
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sgh03400]
    107600221
DNA repair and recombination proteins [BR:sgh03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     107600221
SSDB
Motif
Pfam: DUF3337 WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_SCAP Beta-prop_SPT8 WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_DCAF12 WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_Vps41 WDR54 WD_LRWD1 WD40_like Beta-prop_BBS7 Beta-prop_RIG_1st Tfb2_C
Other DBs
NCBI-GeneID: 107600221
NCBI-ProteinID: XP_016147544
LinkDB
Position
Unknown
AA seq 712 aa
MATHHRQNAAARRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIVRIWSVN
QHKQDSYIASMEHHTDWVNDIILCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTHSLMSTTCGQFATAKQAER
ERECTYTGKHNHTQKASSLSGNKDSIYSLAMNQTGTVIISGSTEKVLRVWDPRTCAKLMK
LKGHTDNVKSLLLNRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNEAFT
HIYSGGRDRKIFCTDLRNPDLRVLICEEKAPILKMELDKSAEPPQAIWVSTTKSFVNKWS
LNGMHNFRASGDYDNDCSAPLTPLCTQPEQVIKGGTSIVQCHILNDKRHILTKDSNNSVA
FCDVLKACKGEDLGKVDFDEEIKKRFKMVYVPNWFSVDLKTGMLTITLDESDCFAAWVAA
KDAGFTSPDGSDPKLNLGGLLLQALLEFWPRTHINPVEEEESELNHVNGEQESRIQKGNG
YFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETESMLLNETVPQWVIDITVVKNMPKFNKI
PFYLQPHSSSGAKTLKKDRLSASDMLQVRKVMEHVYEKIINLDTESQTTSSSVNDKPGEQ
EKEEDVAVIAEEKIELLCLDQVLDPNIDLRTVKHFIWKSGGDLTLHYRQKST
NT seq 2139 nt   +upstreamnt  +downstreamnt
atggcgacccatcacagacagaacgctgctgcacgaaggaaagtccaggtttcctatgtg
attagagatgaggtggagaagtacaatcgtaacggtgtgaacgctcttcagctggatcct
gctctcaacagactcttcacagccggccgagattccatcgtcaggatatggagtgtcaat
caacacaaacaggattcttacatcgcttcaatggagcatcacacggactgggtgaatgac
atcatcctctgttgtaatggaaaaacattgatatcagcctcctcggacaccactgtgaaa
gtctggaatgcacacaaagggttctgcatgtccacgttacggacgcataaggactacgtc
aaagctttagcatatgcaaaggacaaggagctggtggcatcagctgggctggacaggcag
atcttcctgtgggatgtgaacaccctgacagctctgaccgcctccaataatacagtcacc
acacactctctgatgagcaccacctgtgggcaatttgctactgccaagcaagcagagaga
gagagagagtgcacatacacagggaaacataaccacacccaaaaggcttcttcactgagt
ggaaacaaggactctatctacagtctggccatgaatcagacaggaactgtgatcatctca
ggatctacagagaaggtcttaagggtctgggatccacgaacttgtgctaagctaatgaag
ctgaaaggccacactgacaacgtcaaatcattattgttaaacagagacggcactcagtgt
ctctccggtagttcggacggtacgatacgcttgtggtctcttggccagcagcgatgcatc
gccacataccgtgtccacgatgagggtgtatgggcgctgcaggtgaacgaggccttcacg
cacatctactccgggggacgtgaccgaaaaatcttctgcacggatctgcgtaaccctgac
ttgcgtgtgctcatatgtgaagagaaagctcccatcctgaagatggaattggacaaatca
gctgaacctcctcaagcaatttgggtgtccacaactaaatcgtttgtaaacaaatggtct
ctaaatggcatgcataacttcagagcatctggagactacgacaacgactgcagtgcccct
ttaactccactgtgtacacagccagagcaggtcatcaaaggaggcaccagcattgttcag
tgtcatattctcaatgacaagaggcacatactcactaaagactccaataacagtgtggca
ttctgtgatgtcctcaaggcatgtaagggggaagacctgggtaaagtggacttcgatgaa
gaaattaaaaagaggttcaagatggtctatgtgccaaactggttttctgtagatctcaaa
acagggatgctgaccatcacgctggatgaaagtgattgttttgcggcatgggtggcagct
aaagatgctggttttacaagcccagacggctctgatccaaagttgaatctgggtgggctg
ctcctgcaggcgctgttagagttttggcccagaactcatataaacccagtggaagaggag
gaaagcgaactcaaccatgtgaacggtgaacaggagagtcgaattcaaaagggcaacggc
tacttccaggttcctccacacactcctgtcatcttcggtgaagcaggaggaagaacattg
tttaggttattgtgccgtgattctggaggagagacggagtccatgttactgaatgaaacc
gtacctcagtgggttattgatatcactgtagttaaaaacatgccaaaattcaacaagatc
ccattctacctccaacctcattcatcatctggggccaaaacactcaaaaaggaccgtctg
tctgctagcgacatgctacaggtgcggaaagtgatggagcatgtttacgaaaagatcatc
aacctcgacacagagtcacagaccaccagctcctcagtcaatgacaaaccgggagagcag
gagaaggaggaagacgtggcagtgatagccgaagagaagattgagctcctgtgtttagat
caggttttggatccaaacatagacctcaggactgtaaagcatttcatctggaagagcggt
ggagacctgacccttcattatcgacagaaatccacgtga

DBGET integrated database retrieval system