Sinocyclocheilus grahami (golden-line barbel): 107600486
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Entry
107600486 CDS
T04918
Name
(RefSeq) SWI/SNF complex subunit SMARCC1-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107600486
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgh03021
]
107600486
03036 Chromosome and associated proteins [BR:
sgh03036
]
107600486
Transcription machinery [BR:
sgh03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107600486
Chromosome and associated proteins [BR:
sgh03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107600486
PBAF complex
107600486
GBAF(ncBAF) complex
107600486
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
HEAT_GCN1
BRCT
BRCT_2
Motif
Other DBs
NCBI-GeneID:
107600486
NCBI-ProteinID:
XP_016147880
UniProt:
A0A672M9D5
LinkDB
All DBs
Position
Unknown
AA seq
1096 aa
AA seq
DB search
MATAATAAGGTGSGGPSAGQAGAGSSIGRKKDGGPSSKFWESSETVSQLETVRLWIGKHY
KKYVQTDSPTCKTLAALVVQLLQFQEDAFGRRVSNPALTKLPAKSFLDFKPGGALCHILG
SAYKFKSEQGWRRFDLQNPSRMDRNVEMFMTIEKTLVQNNSLTRPIVYIVSDMEQKQANK
LKDIIKRHQGTITEDKSKATHIIYPSPAQVEEEEWLRPVMRKDKQVLVHWGNYPDSYDTW
VSTSDVDGDVEDPPSSEKPWRVHAKWVIDTDAFNEWMNEEDYEVDENKKPVSFRQRIFPG
EEVSSRTPDRKDRKSLVAGKKRRRSPSPPSTPAESRKKGKKGNPGSQGRRRGHQNDDEQD
EDLTKDLEDPSPVPGMEEVTLPKNVNQKKDSENTPVKGGTVADLDDQEDDSLASGGKEED
EQGKMVINRLIDSEDNVTEQTHHIIIPSYAAWFDYNSIHEIERRALPEFFNGKNKSKTPE
IYLAYRNFMIDTYRLNPQEYLTSTSCRRNLTGDVCAVMRVHAFLEQWGLVNYQVDSESRP
LPMGPPPTPHFNVLTDTPSGLVPLHHRPPQVPPAQQMLNFPEKGKDKPTDLQNFGLRTDI
YSKKNPKGKGAAGGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPI
EDQYLESSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVAAAAAKAALEEFSRVR
EEVPTELVEAHVKKVQEAARSTGKVDPAFGLENSGIAGTAPEEPEKTEPTETEKMDTDSD
SQPDKAESKDEAEKPSESAEKPTETEKEKNETTEKSEPQEEEESEGGESKTAEKDKEEDM
ETTEEGKEGEEEKEEGKKKLELDVGEGNIATAAAAALASAATKAKHLAAVEERKIKSLVA
LLVETQMKKLELKLRHFEELETIMDREKEALELQRQQLLTERQAFHMEQLKYAEMKARQQ
MEQQAAVQQNAGGHHGPPPHGPTPHGPPPGMHPGHPGHPGHPGPAYPPMHHPMGPHHAPQ
TGPMVGPGQPMPGRMMPGPPPVGPPQGGMLPMMGPRHPGPPNGMYPGPPPTAQPDGMPPG
PVGPPVSAPPPRAAEN
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagcggcgactgcagcgggcggcacgggctccggcggaccatcggctggccag
gcgggcgccggttcctcgattggacggaaaaaagacggagggccttcttccaaattttgg
gagagctcggaaacggtgtcccagctggagacagttcggctgtggatcgggaaacattat
aagaagtatgtccaaaccgactctcctacatgcaaaactttggctgcgctggtggtgcag
ttgctgcagtttcaggaggatgcgtttgggcgtagagtcagcaatcctgcccttaccaaa
ctacccgcaaagagctttctcgatttcaaacccggaggagccctttgccacattctgggt
tctgcatacaagttcaaaagtgagcagggctggaggaggtttgatctgcagaacccatcc
agaatggatagaaacgtagagatgttcatgactattgagaagactcttgttcagaacaac
tctttaacccgaccaattgtatacattgtgtctgacatggagcaaaagcaagccaacaag
ctcaaagacatcatcaagagacatcagggcaccatcactgaagataaatcaaaggccact
catattatttacccctccccagcccaggttgaagaagaggaatggctacgtcctgtcatg
cggaaagacaagcaagttttggttcactggggtaattaccctgacagttatgatacatgg
gtatcaacaagtgatgtggatggagatgttgaggatccaccaagttctgagaaaccatgg
cgggtgcatgctaaatgggtcatcgacacagatgctttcaacgagtggatgaatgaggaa
gattatgaagtggatgagaacaagaagcctgtgagtttccgccagcggatcttcccaggg
gaggaagtgtcttcccgtacacccgatcgtaaggaccgcaagtccctggttgccggcaag
aagaggagacgctctccatccccacccagcacccctgcagagtcccgcaaaaagggcaag
aaagggaatcctggatcacaggggagacgccgtggacatcaaaatgatgacgagcaggat
gaagacctcacaaaggacctggaagatccctcccctgtaccaggaatggaggaagttaca
ttgccaaagaatgtcaatcagaaaaaggacagtgagaacacgccagtgaaaggcggaacg
gttgctgatttggatgaccaggaagatgattcactagcatctggtggcaaggaggaagat
gaacagggcaaaatggtgattaatcgtctgattgactctgaggacaacgtgactgaacaa
acccatcacatcattatacccagctatgctgcctggttcgactacaacagtatacatgaa
attgagaggcgtgccctgccagagttcttcaatggcaaaaacaaatcgaagactccagag
atctatctggcttatcgtaacttcatgattgacacataccggctgaatcctcaggagtac
ctgacctccacctcctgcaggagaaacctcactggagatgtctgtgcggtcatgagagtg
catgcctttttggagcagtgggggctggtgaactatcaggttgattctgagagcagaccc
cttcccatgggccctccaccaaccccacatttcaatgttctgactgatactccctctggc
ttggtgccgctgcaccaccgccccccacaggttccccctgctcagcagatgctgaacttt
ccagagaagggcaaagacaagccaactgacctgcagaactttggcctccgtacagatatt
tactcaaagaagaatcccaagggtaaaggggctgcaggtgggagagagtggactgagcaa
gaaacattgcttctgttggaggctctggagatgtataaggatgactggaataaggtttct
gagcacgtgggtagccgtacacaagatgagtgcatcttgcacttcctgcggctgcccata
gaggatcaatacctggagagctctgaagcctcactaggccctttggcttaccagccgatc
ccctttagccaatcaggaaatcctgtcatgagcactgttgcattccttgcctctgtggtc
gacccgcgtgttgcggcggctgctgccaaagcagctttggaggagttctcgcgtgtgcgt
gaggaggttcccaccgagctggtggaagctcatgtgaagaaggtacaggaagccgcgcgc
agcacaggaaaagtggaccctgcgttcggcctggagaacagtggcattgccggtacagct
cctgaagaaccagaaaagacggaacctacagagactgagaagatggacactgactcggat
tcccagcctgataaggcggagtcaaaggatgaagcagaaaagcccagcgagtctgcggaa
aagccgacagagacagagaaggaaaagaatgagactacagagaaatctgagccgcaggaa
gaggaagagagtgagggaggagaatccaagacggcagagaaagacaaagaggaggacatg
gagaccacagaggaagggaaagagggtgaggaagaaaaggaggaaggaaagaaaaagctt
gagttggatgtcggagagggcaacatcgccaccgctgccgctgctgctctggcctctgct
gccaccaaggcaaagcacctggctgcagtggaagagaggaagatcaaatctcttgtggct
ctgctggtagaaactcagatgaagaagctggagctcaaactcagacactttgaggagctg
gagaccatcatggaccgtgagaaagaagcactggagctccagaggcagcagcttttgaca
gagcgacaggcattccacatggagcagttgaaatatgctgagatgaaggctcgtcagcag
atggagcagcaggcagctgtgcagcagaatgcaggaggacatcacggaccacctccacat
ggcccaactccacacggcccacctccaggcatgcaccctggacacccaggacatcccggg
cacccaggccccgcatatccccccatgcaccatcccatgggtccccaccatgcccctcag
acaggaccaatggttggaccaggtcagcctatgccaggccgaatgatgcctggacctccc
ccagttggacccccacagggtggcatgctgcccatgatgggccctcgacaccctggacca
cccaacggcatgtacccaggtccacctccaaccgcacagcctgatgggatgccccctggc
ccagtgggacctcctgtatctgcgccccctcctcgtgctgctgaaaactaa
DBGET
integrated database retrieval system
