Sinocyclocheilus grahami (golden-line barbel): 107600769
Help
Entry
107600769 CDS
T04918
Name
(RefSeq) rho guanine nucleotide exchange factor 12-like isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04270
Vascular smooth muscle contraction
sgh04625
C-type lectin receptor signaling pathway
sgh04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
107600769
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
107600769
09153 Circulatory system
04270 Vascular smooth muscle contraction
107600769
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sgh04131
]
107600769
Membrane trafficking [BR:
sgh04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
107600769
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
APAF1_C
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
107600769
NCBI-ProteinID:
XP_016148213
LinkDB
All DBs
Position
Unknown
AA seq
1446 aa
AA seq
DB search
MSGTQSTLAERFPKKASRTGSILSKDHPPDKKPKSDKASVPPSHEFDPTELAVQSVVADG
RPESCGLVQRCVIIQKDENGFGLTVSGDNPVFVQLVKEDGAAMRAGVQTGDRIIKVNGTL
VTHSNHVEVVKLIKSGSYVALTVLGRPPGLPQIPLSDGEGEEGPLFSLTSPHSPGPIGPD
RSSSSPNPSERKPTPLSVWAMTEEHSRNPTPKLLKEIQDAKKHIPQHQEQLSKPSGTGQD
GSLSPRPGEGEQEDRGGDLDRPPSWQGDAGIEPAWTNNTTAPVTPSPVPESPCQRETPCH
SPKTTPRDNLNSCPSPDAEDTPDLDCQSNVGSPSIRPVAHIIGAEDEDFDTEQEQLNGQC
SCFQSVDLLKSRPAHLAAFIHHVVSQFDPAPLLCYLYAELYKQTSSKETRRILMDTFFIE
KPASLKVTVPESIIADLERTAHSINAERKRPEPISEDVHRQYVQQLQDTLLPDIQKNLED
FRHKRSMGLTLAEAELARLDTERMRDRVALEKERSCAEHIISKIEDVLLTSQATEEDKCS
TMQFVILSYMKQLGVKVKESRGLEHKPKLMNLFPKIKKSIKPEKDGSEEKSKKTRFPSVF
PQRRPSRIDTSAISRALEPRQRQTKPQLPLGAGEQADGSSPPVRSSQSSEGSDGTTAQVT
SPPYSAPAAQGTDSINRESEAGGLPSSALPRLGDGVVSGDLQDSSSSNTHFDFSPCTLEH
LQEEEAETDKTQDTGTPRPDRSRMEPLGSGEVQSEDDQCAEIELEPPNWQTLVSRDVLST
LTPQEIKRQEVINELFYTERAHVRMMKVLENLFYQPLIREAIIPPADIKNIFSNLEEIVQ
LHMSLTEQMTAVRKKNETALIDSIGDDLLSWFSGEEEAKIKRAAGMYCSNQPFALELIKS
KQKKDQRFNSFIQEAESNRHCRRLQLKDIIPVETQRLTKYPLLLENIAKYTEDPEERSKV
KQAGECCRKILTHVNQEVKEAENKQRLEDYQRRLDLSSLKQSENPMIAEFKTLDLTKRKM
VHEGPLSWKVNKDKTIELYTLLLEDILVLLQRQDEKLILKCHSKNLAGTAETKHIFSPII
KLSTVMVRSVATDNRSFFVLSMSDNGAQIYELMAQTVSEQKTWQCLITQRADCMKTKLHN
IIPLPQTDGEREAVELINSGVQKLNKDSEPISLVSIQSPEKDGTEIMPTPPCSTNPFETK
SDEEDEEEENSLQNQAEDDEAFVVADMTDRLTFLKQRSRLGIAIDEDEAEAFELQPLRAD
EALRTLATLRQLLINHMSSQEDTDRDIERREQKEDVARTGSQQGAEDSTAIRSAVENGSE
RAENTQELPSGDTGFFETSEDCVSAGSYMVLEVYGGSGESSTDDDVQGSSGEPVAAGDSG
IDLKKLLSSSSQSSGGPNLNRQIMTHIRLLQANLQHLKDTEIKYNQLRQRLSKETATDTE
ENKDKS
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcacacagtccacgcttgctgagaggtttcccaaaaaagcgagcaggacagga
agtattctcagcaaggaccatcccccagacaaaaagcccaaaagcgacaaggcgtcagtc
cccccctcgcatgagtttgaccccacagaactggctgttcaaagtgtagtagccgacgga
aggccagagtcctgcgggcttgtgcagcgttgtgttatcatccagaaagatgagaatggc
tttgggctgacagtgagcggcgataaccctgtgtttgtacagcttgtaaaagaggatgga
gctgccatgcgagctggtgttcagacaggtgaccggatcataaaggtcaatgggacatta
gttacacattcaaatcatgtagaagttgtaaagctaataaaatcgggctcctatgtggcc
ctgacagttctggggagaccgccaggcctgcctcagatccccctctcagacggcgagggg
gaggaggggcctctcttctcactcacctcccctcactccccggggcccatcggtccagac
cgctcgtcttcctcccccaacccctcggagcgcaaaccgacccctctgtctgtatgggcc
atgacggaggagcacagcaggaaccctacacctaaactactgaaggaaatccaggatgcc
aagaagcacattccacagcaccaggagcagctcagcaagccctctgggactggacaggat
ggctccttatctccaaggccaggagaaggagagcaggaggatagagggggagatttggat
cgacccccttcatggcagggcgatgctggaattgagccagcgtggaccaacaataccaca
gcccctgtcactcccagtcctgtcccagagagtccatgccaaagagagaccccctgccac
agcccaaagaccacaccccgagacaacctcaactcctgtccttcaccggatgccgaagac
acacctgaccttgattgtcagtcgaatgtggggagcccctccattcgtccggtagcacac
atcattggtgctgaggatgaagactttgacacagagcaggaacagttgaatggccagtgt
agctgttttcagagcgtagacctcctgaaatctcggcctgctcacctggcagctttcatc
catcatgtggtttctcagtttgaccctgcgccgctgctgtgctacctctatgctgaactt
tacaaacagaccagctccaaagagacacgacgaatcctcatggataccttcttcatagaa
aaaccagctagcttgaaagtaacagtgcccgaatccatcatcgctgacctggaacggact
gcacactcaattaatgcagaaaggaagaggccggagcccatctcagaggacgtccaccgg
caatatgtgcagcagctgcaggacacactactacctgacatccagaagaacctagaagac
ttcaggcacaagcgcagtatgggtctgaccctggctgaagcagagctagcccgtctggat
acagagagaatgagagaccgtgtggctctggaaaaagagcgatcctgtgcagagcacatt
atctctaagatagaggatgtactattgacgtcacaggccacagaggaagataagtgtagc
accatgcagtttgtgatactgtcgtatatgaagcagctcggcgtaaaagtgaaggagtct
cgagggctggagcacaagcccaagctaatgaatcttttccctaaaataaagaaaagcata
aagcctgagaaagatggaagtgaggagaaatcaaagaaaacacgatttcctagtgtcttt
cctcagagacggccgagcaggattgacacttcagcaatcagcagggctctggagccgagg
cagcgtcagacaaagcctcagctgccgttgggtgctggagagcaggcagacgggtcgtct
cctcccgtacggagcagtcagtcgagtgaaggctcagatggcaccactgcccaggtcacg
tcacccccttacagtgctccagcagcacagggcacagacagcatcaaccgagagtctgag
gctggtggacttccctcttctgcactacctagactgggagacggtgtcgtctcgggagat
ctgcaggactcgtcctcttcaaacactcactttgacttcagcccctgtacactggagcat
ctacaggaggaggaagctgagacagacaagacgcaggacaccggcacccccaggcctgac
aggagcaggatggagccgctgggctctggagaggtgcagagtgaagatgatcagtgtgct
gagatagagctggagcctcctaactggcagacgctggtgagcagagatgtcctgtccaca
cttacccctcaggaaatcaagagacaagaagtcatcaacgagttgttctacacagagaga
gcacacgttcgaatgatgaaggtcctggagaatttgttttaccagccgctgatccgagag
gccatcatccctcctgcagacatcaaaaacatcttcagcaaccttgaggagatcgttcag
ctgcacatgtctttaacagaacaaatgactgcggttcggaagaaaaatgagacggcgctc
attgactcaataggagatgatttgctttcctggttcagtggagaagaagaggcgaagatc
aagagagctgcgggcatgtactgcagtaatcagcctttcgccctggaactcatcaagagc
aaacagaagaaagaccagcgcttcaactcctttatacaggaggcagagagtaaccgacat
tgtcgcaggctacagttaaaggacattattcctgtggagacacaaagactcacaaagtat
cccctcctgctggagaacatcgccaaatacacagaggatcctgaggagagaagtaaagtg
aaacaggctggcgaatgctgtcgaaagattctcactcacgtcaaccaggaggtgaaggaa
gccgagaacaaacagaggttggaggattaccagagacgactggacctgtcctcactgaag
cagagtgagaaccccatgatcgccgagttcaagaccctggacttgactaagaggaagatg
gtgcatgagggaccgctgtcctggaaggtcaacaaagataaaactattgagctgtacaca
ttgctgctggaggatatattggtgctacttcaaaggcaagatgagaagctgatcttaaaa
tgccacagtaagaatctggcgggcactgctgagaccaaacacatcttcagccccatcatc
aaactcagcactgtgatggtgcgctcggttgccaccgacaacaggtcattctttgtgctc
tctatgtctgataatggagcccagatctatgaactaatggctcaaaccgtatctgagcaa
aagacgtggcagtgcctgatcacacaaagagccgattgtatgaagaccaaactacacaac
atcattccattacctcagactgacggggaacgtgaagcggtcgagttaataaactctggt
gttcagaaactaaacaaagactctgagcccatttctttagtgagcattcagtctccagaa
aaagatggcacagagatcatgccaaccccaccatgtagcaccaacccatttgagaccaaa
tctgatgaggaggatgaagaagaagaaaactcactacagaatcaggctgaagatgatgaa
gcgttcgtggtggccgatatgaccgatcgacttacattcctgaagcagcgctcgaggctg
ggcatcgccatagacgaggacgaggccgaggccttcgagctccagccactcagagctgat
gaagctctcagaacactggcaacactaaggcagctcctgatcaaccacatgtccagtcag
gaggacacagacagagacatcgagaggcgagagcaaaaggaagatgtggcgaggacaggc
tctcagcagggggcggaggacagcactgcgatcaggtccgctgttgagaatggctcagag
agggctgagaacacacaggaactgccctccggagacacaggcttctttgagacgtctgag
gattgtgtctctgcaggcagttacatggtgctggaggtgtatggaggctcgggcgagagc
agcacagatgatgatgtgcagggcagcagcggggagccagtggccgcgggagactcaggc
attgacttgaagaagctcctctcttcctcctctcagagcagcggaggaccaaacctcaac
agacagatcatgacacacatacgtctactacaggccaacctgcagcatctgaaggataca
gaaatcaagtataaccagctacgccaaaggctatcaaaggaaacagctactgacacagag
gaaaacaaagataaaagttag
DBGET
integrated database retrieval system
