Sinocyclocheilus grahami (golden-line barbel): 107601257
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Entry
107601257 CDS
T04918
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein-like
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgh03019
]
107601257
03036 Chromosome and associated proteins [BR:
sgh03036
]
107601257
Messenger RNA biogenesis [BR:
sgh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107601257
Chromosome and associated proteins [BR:
sgh03036
]
Eukaryotic type
Gene silencing
piRNA pathway
107601257
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
107601257
NCBI-ProteinID:
XP_016148857
LinkDB
All DBs
Position
Unknown
AA seq
1686 aa
AA seq
DB search
MAPIRDSVSHSPNQTGLEHAGLEPQYENSPWSSGSPCSNSNSNWGKVIVDKGPWPSITGS
DPELASECMDADSASSSGSEKNLSMMASGSTGGDNNGNRQGSHFMVANGSSNGSVKGPWG
VSNGSMLSTCQGSGEGPSSKLAESSHGKINAWGTQGSSTNVGINPSTLNPNANHGAWPVL
QNTGPNPHGPAGNGNGGTNTQQSIIGQTPSMQSINSKMSWGCLQENMSEAEVNSTNKVPS
GQPQNLNTEFNGPNNTTNTMTSSLPNSTGSMQMNEQPPGHRAWPMSTGGSPQLPISPVSN
GTSISQHANSERINSGSYGTAWGVPPGTNYSGDKCPIPKGQAVGDTVNATLMQSGANGSS
VSAASLKNNNNNGMGGRGGGWDSAPATSQSMSWGAGSGVGPAGIPRPWGSASSSSSSSSS
SSSNTGTKVSNGEWNTLPSNSQHSNDSTNGSRKGTNGWKSLEDDALGIGSSGQASQGSTW
NKSTGSEGSGESLGGCSERDGQCGGNRRRGNQQGMINAAPSKIDVDPRVLSNTGWGQTPV
HQNTAWDVSSSAKKTGNGHTGWGSAPPQASNSGGWGDGPSTNKSSDSSVSGWTETKPSTG
WGETKGPVEQSRWEDAPSVTMNKGGSSWNGTKDEKSSSWNNPPKAKQGWGGEGPKGNHWG
EPQKSGSGGWDSDSDRSGSAWSEPGRCGTSNTWGGSGGTNTPDQSGPTTGWGEPPKTNNQ
NQTWREPIKSSHSNPTWGDNTKPHNSSEWGKSQDSSMGTFRSGSTSQTGAPGQNKPTGWL
GGPMPTASKEEESTGWEDPSPESIRRRMEIDDGTSAWGDPNKYNCNNVNMWSKNTAGEQD
GMAVSQPPQAQSAMAPKEKNCNSEWGEPYGGPQKMESSTWGEHAAPPVTVDNGTSAWGNP
VDTGSSWEEPGRQNSRGSGWSNAAIGQQSQHKSGSKPMQDNWGGEEMSMTGHSNWEEEVE
VEIGMWNNNPSQEVNQTGNWPYKKMTPKLNKGPNKQDDSPWMNQFVKQFNNMYPRDSAED
SLKSNKMDMSGGMTDKRIDVDKHVLNIGEYGKNPASRHQIHKDSTIDRNHYMDKNVNMYG
VGNAAAQGRNAQQLPAQPLNSTQSSLRNQVPPPLLPSQVPPPLLKYSPNNGGLNPLFGPQ
QVAMLNQLSQLNQLSQLSQINQLQRLLLQQKAQSQRAMPVNSRQEQGRGLGPSQQMIQPP
RHLDPSLMKQQTSPQPPSLHQPSLKSYMENFMPPNASDLQKEQSSLISFSNFPLGLNSNL
NVSNLDIGSVGFKEPQSRLKKWTAMDISVNSPLDQNPSKSGAITSGLRLEDSPFGPYDFI
NASNAPISPPGSVGDGWPSRAKSPHGSTNVNWPPEFRPGEPWKGYPNIDPETDPFVTPGS
VINNLSINTVRDVDHLRDRNNGPSSSLTTTLPSNSAWTSIRASNHNSSLSSTAQSTSARN
SDSKWSPGTVTNTSLAHELWKVPLPSKGISAPSRPPPGLTGQKQPSSWDNSSLRLAGWGS
SESRFNSGSSWGDSSSGRTNWLVLKNLTPQIDGSTLRTLCMQHGPLITFHLNLPHGNAVV
CYSSKEEAAKAQKSLHMCVLGNTTILAEFASEEEINRFFAQGQSMTASPSWQTLGSSQNR
IGSIEGSHPFPNRTDPNHWNGSGDLHGSSLWGVPNYSTSLWGSPSGGEGGRINSPSPISS
FLPESM
NT seq
5061 nt
NT seq
+upstream
nt +downstream
nt
atggctcccattcgggattccgtcagccactcccctaaccaaacaggtttggaacatgct
ggcctggagcctcagtatgaaaattcaccatggagctctggctcaccttgcagcaactcg
aacagcaactggggaaaagttattgtagataagggaccctggccctccatcactggtagt
gacccagagttagcctcagaatgtatggatgctgactctgcctccagctctgggtcagaa
aaaaatcttagtatgatggcgtctgggagcactggtggtgacaacaatggcaatagacaa
ggttctcatttcatggttgcaaatggcagcagtaatgggagtgttaaggggccttggggt
gtatccaatggctcgatgctaagcacatgtcaaggctctggcgagggccccagcagcaag
ctggcagaaagcagccatggcaaaataaatgcatggggtacccaaggttcctcaaccaat
gtaggtataaatccaagcactttgaacccaaatgccaaccatggtgcctggcctgttctt
cagaacactgggcccaacccccatgggcctgcggggaacggaaatggtggcaccaacact
caacaaagcatcataggtcaaacacccagcatgcagagtatcaactctaagatgtcctgg
ggatgcctgcaggaaaatatgtccgaagctgaagtcaatagtacaaacaaggttccaagt
gggcagcctcaaaaccttaacactgaatttaatggaccaaataacactactaacacgatg
acctctagtttaccaaactctacaggttcaatgcagatgaatgaacagcccccagggcac
cgagcttggcctatgagtacagggggctcccctcagctccctatatctccagtctctaat
ggcacttccatttctcaacatgccaacagtgagagaatcaacagcgggtcttatggtaca
gcatggggcgttccgcctggcactaattactctggagacaaatgtcccatccctaaaggc
caagctgtgggcgacactgtgaatgcaactctaatgcagtctggagcgaatggctcctct
gtgagtgctgcttctttaaagaataataataataatgggatgggcggtcgtggaggaggt
tgggactcagcacccgctacctcacaaagtatgtcttggggagcaggcagtggtgtgggc
ccagctgggatccctcgcccctgggggagtgcctcctcctcctcgtcttcctcttcctca
tcctcttcaaacactggcactaaggtctcaaacggggagtggaacactttgcccagcaac
agtcagcattccaatgatagcacgaatgggagcaggaagggaacaaatggatggaagtcc
ttggaggatgatgctcttggtatagggagctccggtcaagcgtcacaaggcagcacatgg
aacaaatctacaggcagtgaaggaagtggagagagcttgggaggttgcagtgagagggat
gggcaatgtggtggcaaccgaaggagaggtaatcagcagggcatgatcaatgcagctccc
tctaaaattgacgtggaccccagggtgctgtccaacacggggtggggacaaactccagtc
caccagaacactgcgtgggatgtttcaagctctgctaaaaagacaggaaatggacataca
ggctggggtagcgctccccctcaggcgtctaactcgggtggttggggagatggacccagc
accaacaaaagtagtgattcttcagtgtctgggtggacggaaactaaaccttcaactggc
tggggagaaaccaaaggcccagttgaacaaagtagatgggaggatgccccttctgttaca
atgaacaagggtggctcctcatggaatggcaccaaggatgagaagtcctcctcttggaat
aatccgccgaaggcaaagcagggatggggcggagaaggcccgaagggaaaccattgggga
gagccccagaaatctggttcaggaggctgggacagtgacagcgaccgctctggatcagcc
tggagtgagccggggcgttgcgggacaagcaacacctggggaggcagcggaggcaccaac
actcctgaccagagtggtccaaccacaggatggggagagccacccaagaccaacaatcaa
aaccaaacctggcgtgagccaatcaaatcaagccactccaaccccacctggggcgacaat
acaaaaccgcacaactcttcagagtggggcaagtcccaagattccagcatgggaacattc
aggagtgggagcacctctcagactggagcccctggtcagaacaagcctacaggatggctg
ggaggcccgatgcctactgcctccaaagaagaagaatccactggatgggaagatccatca
ccagaatccatcaggcgtagaatggagatcgatgatggtacttcagcatggggagatccc
aacaaatataactgcaacaacgtaaatatgtggagcaagaacactgctggagagcaggat
ggcatggctgtttctcagccccctcaagcccaaagcgccatggccccaaaggaaaagaac
tgcaactcagagtggggagagccatatggtgggccacaaaaaatggagtcctctacctgg
ggtgagcatgctgctccacctgtcactgtggacaatggcacgtctgcttggggaaaccct
gttgatacaggttccagctgggaagagccggggaggcaaaactcaagaggcagtggctgg
agcaacgctgctataggacagcagtcacagcacaagtctggatccaaacctatgcaagat
aactggggtggagaggagatgtccatgacggggcactccaactgggaggaggaagtggaa
gtagagataggcatgtggaacaacaatccatctcaagaagtgaaccaaactggaaactgg
ccctacaagaagatgactccaaagctgaacaaaggacccaacaagcaagatgattctcca
tggatgaatcagtttgtgaaacagttcaacaacatgtaccctagggattctgctgaagac
tccctgaagagcaataagatggatatgtctggaggaatgacagacaagcgcattgatgtt
gacaagcatgttcttaatatcggagagtatgggaaaaatcctgcttcacgccaccagatc
cacaaagactctactatagaccgtaaccactatatggataagaatgtaaacatgtacggt
gtcggtaatgcagcagcacaaggccggaatgctcagcagcttccagcacaacctctgaac
tccactcagtccagtctacgcaaccaagtgcctcctccgctacttccctctcaggtcccg
ccacccctgttgaagtactctcccaataatggaggtctgaaccctctgtttggcccacag
caggtggctatgttaaaccagctgtcccaactcaaccaactgtctcagctttctcagatt
aatcagttacagcgtctccttttgcagcaaaaagcgcaaagccagagggccatgcctgtt
aacagccgccaggaacagggtcgcggtctgggtccgtcccaacagatgatccagcctccc
cgccatctcgatccctccctgatgaagcagcagacttcccctcagccaccctcgctgcac
cagcccagcctcaagtcctatatggagaacttcatgccccccaatgcctccgacctgcag
aaagaacaaagttccctgatctcgttcagtaatttccctttaggtttgaactcaaacttg
aatgtaagcaacctcgacattggcagtgttggttttaaggagccacagtcccgtctgaag
aagtggactgccatggacatttccgttaactcgccacttgatcaaaaccccagcaaatct
ggtgctataacatctggcctgaggcttgaagactcaccctttggtccatatgacttcatc
aatgccagtaacgctcccatcagtcctcctggctctgtgggagatggctggcccagccgt
gccaaatcacctcatggttccaccaatgtcaactggccaccagagttccgtcctggtgag
ccttggaaaggatatccaaacattgatcctgaaactgacccatttgtcactcctggcagt
gtgattaataatctctccattaatacagtccgggatgttgatcacctcagggacaggaac
aatgggccatcctcatcacttaccaccacgctgccttcaaatagtgcctggacatccatt
cgtgcctccaaccacaatagttccctcagcagtacagcacaaagcacttcagccagaaac
agtgactccaaatggtctcctggtacagtcaccaacacctctttggctcatgagttgtgg
aaggttcctctcccctcaaaaggtatctctgctccgtcccgacccccgcctggcctgact
ggccagaaacagccctcatcttgggacaacagctctctgagactggcaggctggggtagc
tctgaatccagattcaactctggttccagctggggtgacagcagctcagggagaactaat
tggcttgttctcaaaaacctcacacctcagattgatggctccaccttgcgaactctgtgc
atgcagcacggtccactgatcacattccatctgaaccttccccatggcaacgctgtcgtc
tgctacagctctaaggaggaggcggcaaaagcccagaagtcactgcacatgtgtgtttta
gggaacactactattcttgcagagtttgctagtgaagaggaaattaatcgtttctttgca
caaggtcagtcaatgactgcctctcccagctggcagacattgggctcttctcagaaccgg
atcggatccatcgagggttcccaccccttcccaaaccgcactgatccaaatcactggaac
ggcagcggagacctgcacggctcgtctctctggggcgttcccaattactccacgagcctg
tggggcagccccagtggtggtgaaggggggagaatcaacagtccctcccccatcagctcc
ttccttccggagtccatgtag
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integrated database retrieval system
