Sinocyclocheilus grahami (golden-line barbel): 107601260
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Entry
107601260 CDS
T04918
Name
(RefSeq) E3 ubiquitin-protein ligase TRAF7 isoform X1
KO
K10646
E3 ubiquitin-protein ligase TRAF7 [EC:
2.3.2.27
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sgh04121
]
107601260
Enzymes [BR:
sgh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107601260
Ubiquitin system [BR:
sgh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
107601260
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
WDR55
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
WD40_like
Beta-prop_SPT8
zf-RING_UBOX
Beta-prop_DCAF4
zf-C3HC4
zf-C3HC4_2
Beta-prop_IFT140_2nd
zf-C3HC4_4
Beta-prop_Nup120_160
zf-C3HC4_3
Sina_ZnF
zf-TRAF
zf-RING_5
DUF1664
EzrA
DUF16
Filament
DUF4164
DUF641
Ac45-VOA1_TM
U-box
KxDL
Motif
Other DBs
NCBI-GeneID:
107601260
NCBI-ProteinID:
XP_016148861
LinkDB
All DBs
Position
Unknown
AA seq
700 aa
AA seq
DB search
MKRICCIRTTLPTILWLQQIFSTGLCCIMSCSKPSRFDHFSGGSVASATTVPSPDNSNRT
KMEASFGSTFPAVPQVAKAETNYKQHRRTPSSSSTLTYSARDDDDGMLPISTPRRSDSAI
SVRSLHSESNMSLRSTFSLHEEEEDTEPQVFAEQPSVKLCCQLCCSVFKDPVITTCGHTF
CRRCALTSEKCPVDNSKLTVVVNNIAVAEQIGELFIHCKYGCQPAASGKPGAFEVDPLGC
PFTIKLSIRKDHELSCDYRPVRCPNNPNCPPLLTMNLEAHLKECEHIKCPHSKYGCTFIG
NQDTYETHLEVCKFEGLKEFLQQTDDRFHEMQVTLAQKDQDISFLRSMLGKLSEKLDQLE
KNLELKFDVLDENQSKLSEDLMEFRRDASMLNDELSHINARLNMGILGSYDPQQIFKCKG
TFVGHQGPVWCLCVYSTGDLLFSGSSDKSIKVWDTCTTYKCQKTLEGHDGIVLALCIQGN
KLYSGSADCTIIVWDIQTLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKAIKVWDIVGTEL
KLKKELTGLNHWVRALVASQNHLYSGSYQTIKIWDIRSLECVHVLQTSGGSVYSIAVTNH
HIVCGTYENLIHVWDIESKEQVRTLTGHVGTVYALAVISTPDQTKVFSASYDRSLRVWSM
DNMICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVWTC
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtatttgctgtatccgcactacattacccacaatcctctggctgcagcagata
ttttctacagggctttgctgtattatgagctgtagtaaaccatcgcgcttcgatcatttc
tcaggaggatctgtggcaagtgccactactgtaccctcacctgacaacagcaaccggacg
aaaatggaagctagttttggatccacgtttccagcagtccctcaagtagcaaaagcggaa
actaattacaaacagcaccgtagaaccccttcatcctccagcactctgacctactccgct
cgtgacgatgatgatggcatgctgcctattagtacccctcgtcgctcagactctgccatc
tcggttcgctctctgcactccgagtccaacatgtcgctgcgctccaccttctccctgcac
gaggaagaggaagacacagagccacaggtgtttgcggagcagccctcagtcaagctttgt
tgccagctgtgctgcagcgtgttcaaggaccccgtcatcaccacctgcggacacacattc
tgcaggcgatgtgccttgacctcagagaaatgccccgtggacaattccaagctcacagtg
gtcgtgaataacattgcggtggccgagcaaatcggagagcttttcatccactgcaagtac
ggctgtcagccagctgcctcgggcaaacccggtgcctttgaggttgacccgcttggctgt
cctttcaccatcaagcttagcatcaggaaagatcatgaactaagctgtgactacagacct
gttcgctgtcccaacaaccccaactgccctccattgctcaccatgaacctggaggcccat
ctgaaagagtgtgaacacattaagtgccctcactctaaatatggttgcaccttcatcggg
aatcaggacacatatgagacgcacctggaggtgtgtaagttcgaggggctgaaggagttt
ctccagcagacggatgacagattccatgagatgcaggtgacactggcgcagaaggaccag
gacatctcgttcctgcgctccatgctgggcaaactctctgagaaactagatcagctggag
aagaacttggaactcaagttcgatgtgctggatgagaaccagagtaaactcagtgaagat
ctgatggagttcagacgagatgcttccatgctgaatgatgaactgtctcacatcaatgcc
aggctcaatatgggtatactgggctcctacgatccccagcagatcttcaaatgcaagggt
acttttgtgggacaccagggtccagtgtggtgtttgtgtgtctattctactggtgatctt
ctctttagtgggtcatcagataagtccatcaaggtttgggacacatgcaccacatataag
tgccagaagacccttgagggccatgatggcatagtgttggcattgtgcattcagggaaac
aagctttacagtggctcagctgactgcaccattattgtttgggatattcagaccctgcag
aaagtgaacaccatccgagcacatgacaacccagtgtgcactctggtgtcctcacacaac
atgctattcagcggctctctcaaagccattaaggtgtgggatattgtgggcacagagctg
aagctaaagaaggaactaactggcttgaatcactgggttcgagctctggtcgcttctcag
aatcatctgtacagcgggtcttatcaaaccataaagatctgggacatccgttctctggag
tgtgtccatgtgctccagacatctggaggcagtgtgtactccattgcagtcaccaatcac
catatagtttgtggcacctacgagaaccttattcatgtttgggacattgagtccaaagag
caggtgcggacgctgacgggccacgtgggcacagtgtatgccctggccgtcatctcaacc
cccgatcagaccaaagtgttcagtgcctcctatgatcgctcccttagggtgtggagcatg
gacaacatgatctgcacccagactctgctgcggcaccagggtagtgtgacggcgctcgct
gtgtccagaggaagactcttctctggagctgtagacagcactgtaaaggtgtggacatgc
taa
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integrated database retrieval system
