Sinocyclocheilus grahami (golden-line barbel): 107601400
Help
Entry
107601400 CDS
T04918
Name
(RefSeq) E3 ubiquitin-protein ligase rnf213-beta-like
KO
K22754
E3 ubiquitin-protein ligase RNF213 [EC:
2.3.2.27
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sgh04121
]
107601400
Enzymes [BR:
sgh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107601400
Ubiquitin system [BR:
sgh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107601400
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_22
AAA_5
AAA_7
ABC_tran
Sigma54_activ_2
NACHT
ATPase_2
Motif
Other DBs
NCBI-GeneID:
107601400
NCBI-ProteinID:
XP_016149052
LinkDB
All DBs
Position
Unknown
AA seq
2550 aa
AA seq
DB search
MSSIIVESAACFGEDHEGRLLDPQSAINFLLSQDKWNGNQWKLEDDASRLIADSQSFLRS
LIQSLCQGNIPLGHLKTVFKSKSQFQKLYNQHKKNNKEENISIDVSELLSQREDDLKAFE
QQKKFMTNLINMLGKITDVVDVPEVSSLEDMVKTNLQMVTLDKLVEVQTYFSKEDLDKNN
TRRVLFYNVDLQVMAREMHEVKTSDLLLSLWLEKATEYFMPGSQLLSLDLTDVHDRIWKP
CLTNFLNLGLRIAVGASSFEEVDQALKWCGDRGEGDRLKKELTLMATMLKSHTFLNVNWP
EDRLSQIQEYRRLHHAAESAEVILKIKDNLELQGDFSHIHSLIQVRDDSFKQNTLGSLSD
VLIRARQKLADVKCQHTACLKAFLESDTLIKWVKTQIPSLRDLKTFMELASISAGENDAD
TDRLASFETVVMGYGPLLYSLPKNAGFEEFIDCAKQVLDIFDKDKKLVDKLVDSRRWLDW
LKGLRETYGSVEQSSLSMASDINTGGVYHVGWPEDFNGKSGLDNVFCVKVTKNEQEKTYN
LNELLELQNKLMLMSSKGEHGREQVNKFTQVFEGVQRMGRILLQLRTSGNMLFRNWGAQI
TCNDQDQPCIQVSFTQLSKCVVYHGEVEEELQKLCRSLENFHKDWCNHLTKTRSQIYALN
HYTSEQIFFLCEWINSISIKRKPVPQQMWHLLTPIKPDCNLNDIREAFEKATETESMVQD
DMAEESEQNSDFDLPLSFSLLDVGTECLEDLWQQFKENMSRFLTHHVDLETLGRFLSNLS
DMNQMHIKRKIPPILQEGRPNLVQCPVVDLISTTLSFYTENQEHPLPTTDEVLMCQEETT
EEEVEIFLRRCLGSQGTASNHQKIYTLVNPGSLAYDVSVALVECFETLERSAGPHYRLVM
VCPVNQDRYVPSFFSNYKVQTGLSISTERIKNSLRHHFRIPSELVPYSEVYPGQLSVWMI
SSERPAVGKSLYVKRLFEQFKKEFPTATCLTIRLIEPCVDMDGFVQTLSERLAPLREQDP
VLLHIDIAALRHGLEEFLFKLLILGCLSDSKGTIWRRNAAHLMAIEALQQVQKSQTQIEI
TNGFLHALPTIFCRPPKDVKALEIKRKKGGYTSLNPLMDNEEFKSEAIQRPYQYLRRFNR
NVNMDRFKYQAQSVEGDPVDCLHHLLSNYGLKDPSWAELKHFTWFLNLQLKDCENSLFCD
PNFLADNLSGFKDFIVKFMIHMARDFASPSIDISDESPSFFSENENEEDILAKLSIRKQW
ENEPHPYIFFNADHFTMSFLGFHVQKFGTILNAVDPRSGKVLMRNVMTQDLFSDIERQRI
KLSENFDDLSREDKIQKVSFVVGAKKGWEKGTFDPDPTYELTTDNIMKMLAIHMRFRCEI
PVIIMGETGCGKTRLIRFLCDLQREGRDVENMKLVKVHGGTTSEVIYRKVREAEELAQDN
RQKYELDTVLFFDEANTTEAIFAIKEVLCDKAVQGYPLKKNSGLKIIAACNPYRRHTPRM
IDRLERAGLGYRVKAEETEDRLGKVPMRQLVYRVHPLPPSMVPLVWDFGQLSDSSELSYI
CQIVQKQMRDHGLPRAYQRVITKVLSASQRYMRRQADECSFVSLRDVERSMCVLVWFYNH
RVDLFPGCHRNETELMTLKCLVLAMGVCYYPSLENKGTYLATMSKCFPCPFNSKESLEQE
ITSCQDFFLEKIQTRDTIAKNLALKENVFLMVVCIELRIPLFLVGKPGSSKSLAKTVIAD
AMQRQASHCDLFKKFKEVHMVSFQCSPHSSPEGIIGTFRNCARFQKDKNFDEYVSVVVLD
EIGLAEDSPQMPLKTLHPLLEDGCIDSDNPDPHMKVGFVGISNWALDPAKMNRGIFVSRW
DPSEKDLVETAEGICSSSHNILLKIKHLLPKLAKGYLDICKTDGEQFFGLRDYYSLVKMI
FATVNSSDQEPSDSELAEAVLRNFSGQRDDFDPLDYFRDIFQNTEVQRPSTLKMIEQNLD
RNSDKECRYLLLLTTNNVALYIIQHHIFSKENYICPEIVFGSGFPKDQEYAQICHNVSRI
KACMETGRTVILLNLLNLYESLYDALNQYYVCFSGQNYVDLGLGSHRVKCRVHKDFRLVV
VEDQEKVYKRFPVPLKNRLEKHKVDRSTDLTPWQHRVLEKLKQWVEDFSKVHQSTEAKFS
LSDAFVGFHGDACASALLQALEKIQKWGHDKAAQNNELHCIPKCDNEISEPSKEGSNINV
AKDVYMKKEESEAHHIDEDEDVTESQEEMNKFLDEEEVQMEGEGASMEVDNKVQDAEVYE
DIETLGDASELVKIYDEDAVDTEARDSLDSNKTMDEEEQVYEMAKSLLLNCASPDSVLRL
KYSEFGNQEKDTLQRMYFHQQSHQSLRDLLDNHLNKNEQDKNRFLEVTTFSNLLTEADVR
NLAPALGLTTEQFLLLSLHQFDTEASFCSKIRSFLRESGLSLHILVVQMDMEESLCKNEL
IASAKYCTMNEILSLKSDECNFYTVFITKLSRIGEHCRTRSNKYIGFQGGVWLSAHIDDL
SDSSDMTLNLKAFCGIPISKLISQKIVSGM
NT seq
7653 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccattattgtggagtcagcagcttgttttggagaggatcatgaaggtcgtcta
ctggacccgcaatcagcaataaacttcctcttatctcaagataaatggaatggaaatcag
tggaagttggaagatgatgccagtcgtttaatagcagatagtcaatcattcttacgttct
ctaattcagtccctttgccagggaaatatacctctgggccaccttaagaccgtctttaag
tctaaaagtcaatttcagaagctttacaaccagcataagaagaacaacaaagaagagaat
atctcaatcgatgtgtcagagctactcagtcaaagagaagatgacttaaaagcctttgaa
caacagaagaagttcatgaccaaccttattaatatgctggggaagattactgatgttgta
gatgtaccagaggtttcttccctagaagacatggtcaaaaccaacctgcagatggtaact
ctggacaaactggtggaagtgcagacatatttctccaaagaggatcttgacaaaaacaac
acaaggcgagtgttattctacaatgttgatctgcaagtcatggcacgggagatgcatgaa
gtgaagaccagcgaccttcttctgtctttatggctagaaaaggcaaccgaatattttatg
cctggttctcagcttttgtcactagaccttacggacgtccatgacagaatctggaaacct
tgtctcactaacttcctcaaccttggtctacggattgcagttggagcaagttcttttgaa
gaggtggaccaagctttgaaatggtgtggggacaggggtgaaggagatcgtttaaagaaa
gagcttactttgatggcaactatgctgaaaagccatacatttctgaatgtaaactggcca
gaggatcggctcagccagattcaggaatacagacgccttcaccatgctgcggaatctgct
gaggtcatactgaaaatcaaagataacttggaattacaaggagacttcagccatattcat
agcctgattcaagtgagagatgactccttcaaacaaaacactctgggttcgctgagtgat
gtcctcatcagagccaggcaaaaactggcagatgtcaaatgccagcacacagcctgtttg
aaggctttcttggaaagtgatactctgatcaaatgggtcaaaacgcaaattccaagttta
agagacttgaaaacctttatggaactggcctcaatttctgctggggagaatgatgcagac
actgataggctagccagtttcgagactgttgtgatgggctatggccctttgctttactca
ctaccaaaaaatgcaggatttgaagagtttattgactgtgctaagcaagtattggacatc
tttgacaaagataagaaactcgtggataaattggtagactccaggcggtggttggattgg
ctgaaaggtttaagggagacttatggctctgttgagcaatcgtctttgtccatggcctca
gatatcaacactggaggcgtatatcatgtgggctggcctgaagatttcaatgggaaatca
ggtttggacaatgtattttgcgtgaaggtgacaaagaatgaacaagaaaagacatacaat
cttaatgaactcctagagctacagaataagctcatgctgatgtcttctaaaggggagcat
ggaagggagcaagtcaacaagtttactcaagtttttgaaggagtccagaggatgggccgc
atcctccttcagttgcgcacatcgggcaatatgctctttcgaaactggggggcacagata
acatgcaacgaccaagatcaaccctgcattcaagttagcttcacccagttgagcaagtgt
gttgtatatcatggtgaggttgaagaggagcttcaaaaactgtgtcgctctctggagaac
tttcataaagattggtgtaaccacttaactaagacacgctctcagatctacgcactgaat
cattacacctcagagcaaatattttttctttgcgaatggatcaacagcattagcatcaaa
aggaaacctgtgccacaacaaatgtggcatcttttgactcctattaaaccagattgtaac
ttaaatgacatacgagaggcctttgaaaaagcaacagagacagaatctatggtgcaagat
gacatggcagaggaatcagaacaaaacagtgattttgacctgcctctgagcttcagtttg
ctagatgttggtactgaatgcttagaggacctgtggcagcaatttaaagagaacatgtcc
aggttccttacccaccatgtggatctcgaaacacttggacgattcctctccaatctgtct
gacatgaatcaaatgcacatcaaacgcaagatacctcctattctacaagagggaaggcca
aaccttgtccagtgccctgttgtggacttgattagcacaactctgtctttttacacagag
aatcaagagcatcctcttccaacaactgatgaggtattaatgtgccaggaggagacaact
gaagaggaggtggagattttcctccgccgatgtctaggatcccaaggcactgcaagcaat
catcagaagatatacacgctggtcaatccaggttcactggcttatgatgtgagcgtggca
ctggtggaatgctttgagacactagaaaggagtgctgggcctcattaccgtctagtgatg
gtctgtcctgtaaaccaggatagatatgttccttccttcttcagcaactataaagtacaa
acaggtctgagtatatctacagaaagaataaaaaactctcttcgccatcactttcgtatc
ccgtctgagcttgttccctactcagaagtctatccaggacaactctccgtctggatgatt
tcatctgaacgtccagctgttggaaagtcactatatgtcaagcgtctatttgagcagttc
aaaaaagagtttccaacagccacctgtcttacaatcagactcatcgagccctgcgttgac
atggatggatttgtccaaaccctgtctgaaagactagctccactgagagagcaggaccct
gtgctgttgcacattgatattgcagcattacgtcatggcttggaggaattcctattcaaa
ttacttattctaggatgtcttagtgacagcaaaggaactatatggaggagaaatgcagct
cacttgatggcgattgaagcacttcagcaagttcaaaaaagtcaaacccagattgagata
accaatgggtttttgcatgcacttcctacaatcttctgcagacctcctaaagatgtcaaa
gctttagagatcaagagaaaaaaagggggttacacatccttaaatccactgatggataat
gaagagtttaaaagtgaggccattcagagaccctaccaatacttgagaagattcaacagg
aatgtgaacatggaccgtttcaaatatcaagctcagtctgtagaaggtgatccggttgac
tgtctccatcatcttttatcaaactacggcctaaaagacccatcatgggcagaattaaag
cactttacttggtttcttaacctgcagcttaaagactgtgagaattctttgttctgtgat
ccaaacttccttgctgacaatttaagtggcttcaaggacttcatagtaaaattcatgatt
cacatggctcgagactttgcctctccatccattgacatctctgatgagagcccctccttt
ttctctgagaacgaaaatgaggaagatatcctagccaaactatctattcgaaaacaatgg
gaaaatgaacctcacccatacatctttttcaatgcagaccatttcaccatgtctttctta
ggattccatgtgcagaaatttggcacaattcttaatgcagttgatccaagaagtggcaaa
gtgttaatgagaaatgtgatgacacaagatctcttttcagacattgagcgacaaagaatt
aagctttctgagaactttgatgacctgtcaagggaagacaagattcaaaaagtttccttt
gttgttggtgccaaaaaaggctgggaaaaaggaacatttgatccagaccctacatatgaa
ctcactactgacaatatcatgaagatgttggctattcatatgagattccgatgtgagatt
ccagtgatcatcatgggagaaactggctgtgggaagacgcggcttatacgctttctctgt
gatctgcaacgtgaaggcagagatgttgaaaacatgaaactagtcaaagttcatggaggt
actacttctgaggtaatctataggaaggtgcgagaagcagaagaacttgctcaggacaac
cgtcaaaaatatgaacttgacacagttttgttttttgatgaagccaacacaaccgaagca
atattcgccatcaaggaagtgctatgtgacaaagctgtacaagggtaccctttgaagaaa
aattctggtctgaaaataattgctgcctgcaatccatacagaagacacacacccagaatg
attgatcgcttggagcgtgctgggctaggatacagagtgaaagctgaagaaacagaggac
cgccttggtaaagttcccatgagacagcttgtgtaccgtgtacaccctttacccccgagc
atggtgcccctggtatgggattttggacaattaagtgattcatctgagctctcttatatc
tgtcaaattgtgcagaaacaaatgagagatcatggattgccccgtgcataccagagagtg
atcacaaaagttttgtctgcctctcaaagatacatgcgcagacaagcagatgaatgcagc
tttgtaagtcttagggatgtggagagatcaatgtgtgtcctagtttggttttacaaccac
agagttgatctttttcctggttgccacaggaatgaaactgagctgatgactttgaagtgc
ttggtgcttgctatgggtgtttgctattacccatcacttgaaaacaaagggacataccta
gcaactatgagcaaatgctttccttgtccattcaactccaaagagtcactggagcaggag
ataacttcatgccaagacttttttcttgagaaaatccaaacaagagatacaattgccaaa
aatctggctttgaaagaaaatgtcttcctcatggtggtctgcattgagttgagaattcca
ctctttctggttggcaagccagggagctcaaaatcgcttgctaagactgttatagcagat
gcaatgcagcgccaggcctctcactgcgacttattcaagaaattcaaggaagttcacatg
gtgtcttttcaatgcagccctcactcaagccctgaaggaatcattggaacctttcggaac
tgtgcccgtttccaaaaggacaagaattttgatgagtatgtgtcagtagttgttctggat
gaaataggacttgcagaggactctcctcagatgccactgaagacattgcatcctcttcta
gaggatggatgcatagacagcgataacccagatccacatatgaaggttggatttgttgga
atctcaaactgggctctcgatccagcaaaaatgaacagaggtatttttgtgtcccgttgg
gacccaagtgagaaggacttagtagagacagccgaaggaatctgctcatcctcccataac
attcttctcaaaatcaagcacctcctgccaaagttggcaaagggctacctagatatctgt
aaaactgacggtgaacagttctttggactccgagattattatagcttggtgaaaatgatt
tttgcaacagtcaacagttcagatcaagaaccatctgacagtgagttggcagaggctgtg
ttgagaaacttcagtggacaaagggatgattttgatcctcttgattactttcgggacatc
ttccagaacactgaagtccaaaggccaagtacactgaaaatgattgagcaaaatcttgac
cgcaacagtgacaaagagtgccggtaccttcttttgctcacaactaacaatgttgccttg
tacattatccaacaccacattttctccaaggagaactatatatgccctgaaattgtcttt
ggatcaggatttcccaaagaccaggagtatgcccagatatgtcacaatgtgagtagaata
aaggcatgcatggagacaggccgaacagtcatcctattgaatctcctcaatttgtatgag
agcctgtatgatgccttgaatcaatactatgtctgcttcagtggacagaattatgttgac
ttgggacttggttctcatagagtaaagtgtcgagttcacaaagacttcagactggttgtg
gtggaggaccaggaaaaagtctacaaaaggtttcctgttccacttaaaaacagactggag
aagcacaaagttgataggagtacggatttgactccctggcagcacagagttttggaaaaa
ctcaaacagtgggtagaagacttctcaaaagttcatcaatccactgaagcaaaattcagc
ttatcagatgcctttgttgggttccatggggatgcttgtgccagtgcacttctgcaggct
ttagagaaaatacaaaaatggggccatgataaagctgctcaaaacaatgagctccattgc
attcccaagtgcgataatgaaatcagtgaaccaagtaaagaaggctctaatattaatgtg
gccaaggatgtatacatgaagaaagaggaaagtgaggctcatcacattgatgaagatgaa
gatgtgacagagtctcaagaggaaatgaacaaattccttgatgaggaggaggtgcaaatg
gaaggagaaggtgcctcaatggaagttgacaacaaggtacaggatgcagaagtttatgaa
gacattgagactcttggagatgcttctgaacttgtgaaaatctatgatgaagatgctgtt
gacactgaggcaagagacagcttggactcaaacaaaaccatggatgaggaagagcaagtc
tatgaaatggccaaaagccttctcttgaattgtgcctcaccagactcagtacttagatta
aagtattcagaatttggaaatcaggagaaagacacacttcagagaatgtattttcatcag
caaagccatcaatctctcagagacctattagacaaccatctgaacaaaaatgaacaggac
aagaacagattcttggaggtaaccacattctccaatcttctcactgaagctgatgtgaga
aatcttgccccagccttgggcttgaccactgagcagtttcttctgctctctttacaccaa
tttgacacagaagcttctttttgcagcaagatacggtccttcctgagggaatctggactt
tctctgcacattcttgtggttcagatggacatggaagagtctttgtgcaaaaatgaactt
attgcttcagcaaaatactgtaccatgaatgaaatcttgtccttaaagtcagatgagtgc
aacttctatactgtgtttatcacaaagctctcccgaattggggagcattgtagaacaaga
agcaacaagtacattggctttcaaggaggagtttggctgtctgcacatattgatgacctc
agcgattccagtgacatgaccttaaatcttaaggctttttgtggaatacctataagtaaa
ctcatctcccagaaaatcgtgtcaggtatgtaa
DBGET
integrated database retrieval system
