Sinocyclocheilus grahami (golden-line barbel): 107601722
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Entry
107601722 CDS
T04918
Name
(RefSeq) rho guanine nucleotide exchange factor 12-like isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04270
Vascular smooth muscle contraction
sgh04625
C-type lectin receptor signaling pathway
sgh04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
107601722
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
107601722
09153 Circulatory system
04270 Vascular smooth muscle contraction
107601722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sgh04131
]
107601722
Membrane trafficking [BR:
sgh04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
107601722
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
107601722
NCBI-ProteinID:
XP_016149476
LinkDB
All DBs
Position
Unknown
AA seq
1368 aa
AA seq
DB search
MSDTRSPVTDRTSSILSRDPPPDKRPKSDKLPGTPTHEFDPPGLVQRCVIIQKDESGFGL
TVSGDNPVFVQLVKQDGAAMRAGVQTGDRIIKVNGTLVTQSNHVEVVKLIKSGSYVALTV
LGRPPGLPQIPLSEVDVGLGSPGGYGDPFVTSPNSYNAAERTSSPLVSWEENSAPLNQRI
DNKRMVSKEQQDIQGLKEDYSRTPTPKPLRDIQEAKKHIPHQQGHTHESLCLRNSEDGFW
VREDQYKGDFSPEGFWSGRSVSSVQRRFYPASPESQRDSNCSSPKSIPRDSLNFCPSPEV
EDGFDLDSRFSSTIGSPPSRLASEIIAAEDDDFDIEQEQVNGQCNCFQSIELLKSRPAHL
AVFLHHVISQFDPAPLLCYLYADLYKQTNSKETRRIFMDFLTFFIDRGANLKVAVPESIS
SELERRRPELIPEELHRQYIQTMQETLLPDVQRNLEDFRQKRSMGLTLADVELSRLDSQQ
LALERERSCAENILSKIDDVLLTSQTAEEEKFNAIQYVIFMYMKHLGVRVKEQRNLESKR
VRINFLPSKLRKSKTEKEGEEKLKKPCFPKPWWASRIDSVPSGRAGDNIKHRPQKQMSQP
ALGGSELIEGGRLRGSQSSEGSDLLQSPSFITSPPFSAPYSSPSDPSGKDPEFNMSSSEV
VPRLSDGQQSGDVLDSIYPPCEDIPYNIDQLDDDGFRLLDVGTPKLSRRFEELQSEDDQG
SDVYSDVDPPNWQQVVGRDVLAGLTPHEIKRQEVINELFYTERAHVRMLKVLDSVFYQKL
TRDNILPPADIKNIFTNLEEIIQLHMRIADQMTAIRKKNESSVIDHIGDELLSWFSGGEE
EKIKQAVGTFCSNQPFALELIKSRQKKDQRFTSFIQEAESNRLCRRLQLKDIIPAEMQRF
TKYPLLMDNIVKHTDESEEKDKVRRAAECCRHILSHINQSVKESENKQRLEDYQRRLDLS
SLKQSENPMISEFKNLDLTKRKMVHEGPLSWKINKDKTIELYALLLEDILVLMQKQDERL
ILRCHSKNLAGTADTKHIFSPIIKLSTVLVRSVATDNRSFFVISMSKNGAQIYELMAQTV
SEQRIWQQQIAQRADVMNAKPHSVIPLPQHDGDRDSVELSKPNKGSERISTGSIQSTEKD
SEFSPTAALRDCVPDTSPGEEDQVPRAGRDGSYLDSELLNGRDADSLSCSSKADEALKTL
AALKQVLVTQLMAQDEGEQLGRSAGNRLLRTTSLRTPVEHSSTRTQSRAQDYTSGDTGFY
ECPEDYAAYLVLEGYGGPGESSTDDDIQVRRKESSLAHSCAADSGISLKFSSPSSGSTSR
LSRQVLSHLRCLQANLSHLKEMETKYYNLLRQRPVGSTADTDESRDKK
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacacacggtccccagtcactgacagaaccagtagcattctcagcagagacccc
cctcccgacaagaggcccaaaagcgataagctgcctggtacccctacacacgagtttgac
cctccagggctggttcagagatgcgtaatcattcagaaagatgagagcggctttgggctg
accgtcagtggggacaaccctgtttttgtgcagctcgtcaaacaggatggagctgccatg
cgtgcaggtgttcagacgggggacaggatcatcaaggtgaacgggacattggtgacgcaa
tcaaaccacgttgaagtggtgaaattaattaaatccggctcatatgtggccctcacagta
ttaggccggcctcccgggttgccccagatccccctctctgaggtagacgtgggtcttggg
tcaccggggggttatggggaccctttcgttacatctcccaactcatacaatgcagcggaa
cgcacctcctctcctcttgtgtcatgggaagagaacagtgctccactcaaccaaagaata
gacaacaagaggatggtgtctaaggagcaacaggacatacagggactgaaggaggactac
agcagaactcccacacccaaaccactacgggacatccaggaagccaagaagcacattcca
catcagcagggccatacacatgagagtctgtgtctcaggaacagtgaagatggcttttgg
gtgcgtgaggatcaatataagggagatttcagcccagagggtttctggagtggaagatca
gtgtcatctgtccagcgccggttctacccggcctctccagagagccaacgggactccaac
tgttccagtccaaagagcatccccagagacagcctcaatttctgcccctcccctgaggtc
gaggacggttttgacctggattctcgtttctcatccaccattgggagcccaccctcccgc
ctggcttcagagatcattgctgctgaagatgatgactttgacattgagcaggagcaggtg
aacggccagtgcaactgcttccagagtattgagctgctcaagtctcgccctgctcatctt
gctgtctttctgcaccatgtgatctctcagtttgaccctgcacctctgctctgctaccta
tacgctgacctctacaaacagaccaactccaaagaaacacggcggatattcatggacttc
ttgacgttcttcatagaccggggggcaaatttgaaagtggctgtgcctgaatccatctcc
tctgagctcgagcggcggaggccagagctgattccagaggaattacacaggcaatatata
cagacaatgcaggaaactctccttccggatgtacagagaaacttggaggacttcaggcag
aagcgcagtatgggcttgaccctggctgacgtagagctgtctcgtctggactctcaacag
ctggctctagagagagagagatcatgcgctgaaaacatcctatccaagatagatgatgtt
ctgttgacttcacaaaccgcagaagaggagaaattcaacgccatacagtatgtgatcttt
atgtacatgaagcatctgggagttcgggtgaaagagcaacgaaaccttgagtccaaacga
gttcgaataaattttcttccttccaaactaaggaaaagcaaaacggagaaggaaggggag
gagaagctgaaaaagccttgctttcccaagccttggtgggccagtcgcatcgattcagta
ccgtctgggagggccggggacaacatcaagcatcggcctcagaagcagatgtctcagcca
gctttgggcgggtcagagctgatagagggtggacgtctgcggggcagtcagtcgagtgag
ggctcagacctcctacagagcccgagttttatcacctctccccccttcagtgccccttac
agttcaccgtcagacccctctggcaaggacccggagtttaatatgagctcgtctgaggtg
gttccccggctcagtgatgggcagcagtctggagatgtgctggacagcatctacccaccc
tgtgaagacatcccatacaacattgaccagctagatgacgatggattcagactccttgat
gtgggcacacctaaactgagtagaaggtttgaagagttgcagagtgaggatgatcagggg
agtgatgtttactctgatgttgatcctccaaactggcagcaggtggtcgggcgtgatgtt
ttagcaggcctgacgccccatgagatcaagagacaagaagtcattaatgaactattctac
acggagcgagcccacgtacgcatgctgaaggtcctagacagtgtcttctaccagaaactc
acccgagacaacatactgccccctgctgacatcaagaacatattcaccaacctggaggaa
atcatccagttacacatgaggatagcggatcaaatgacagcgatacgcaagaagaatgag
tcatcggtcatcgatcacataggagatgagttgctgtcttggttcagtggtggagaggag
gagaagatcaagcaagcagtgggcactttctgcagtaaccaacccttcgccctggagctc
atcaaatcccggcagaagaaggaccagcgtttcacctctttcatacaggaggctgaaagc
aatcgactgtgtcgacgattacagcttaaggacatcatccctgcagagatgcagaggttc
acaaagtaccccttactgatggacaacattgttaagcacacagatgagtcagaggagaaa
gacaaagtgagacgagcagccgaatgctgtcgacacattctcagccacatcaaccagtca
gtgaaggagtcagagaataaacagagactggaggactaccagagacggctggacctctct
tccctcaagcagagcgagaaccccatgatctcggagttcaagaacctggatctcactaaa
aggaagatggtacatgagggtcctctgtcctggaagattaacaaagacaaaactattgag
ctgtatgctttactcctggaagacatcctggtgttgatgcagaagcaggacgagcgttta
attctcaggtgtcacagcaagaacctcgcaggaacggctgacacaaaacacatattcagt
cccatcatcaaactcagcactgtgctggtgcgctccgtggcgacagataacagatcattc
tttgtgatctccatgtccaaaaacggagctcagatttatgagctgatggcccaaacagtg
tccgagcagagaatatggcaacagcagattgctcaaagggcagatgttatgaacgccaaa
ccccacagcgtcattcctttgcctcagcacgatggtgacagagacagtgtcgagttaagc
aagcccaacaaaggctctgaacggatctccacaggaagcatccagtccacagagaaagac
agtgaattttcgcccacggcagccctgcgggattgtgtccctgacaccagccctggggaa
gaggaccaggtcccgagagctggcagggatggctcgtatctggactctgagctcttgaac
ggcagggacgcagactctctgtcctgctcgtctaaagcagatgaggcccttaaaaccttg
gcggcgctgaagcaggtgctggtgactcagctgatggctcaggatgagggtgagcaattg
ggcagatcggccggcaatcgtctcctcaggaccacctctctacgcacaccggtggagcac
agctccactcgcacccaaagtcgagctcaggactacacctctggagatacgggtttctac
gagtgcccagaggactacgcagcttacctggttctggaggggtacggtgggccaggcgag
agcagtacagatgacgatattcaggtccggagaaaggagtcgagtttggcccacagctgt
gctgctgactcgggcatcagcctcaagttctcctcaccctcctctggcagcacgtctcgc
ctcagcagacaggtcctctcacatctacgctgcctgcaggccaacctcagccacctcaag
gaaatggaaaccaagtattataatctacttcgccaaaggcctgttgggtcaacagcagat
acggatgagagcagagataagaaatag
DBGET
integrated database retrieval system
