Sinocyclocheilus grahami (golden-line barbel): 107601862
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Entry
107601862 CDS
T04918
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3-like
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107601862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgh03021
]
107601862
03019 Messenger RNA biogenesis [BR:
sgh03019
]
107601862
Transcription machinery [BR:
sgh03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
107601862
Messenger RNA biogenesis [BR:
sgh03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
107601862
U7-dependent histone pre-mRNA processing factors
107601862
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
DUF1611
MTC2_N
Motif
Other DBs
NCBI-GeneID:
107601862
NCBI-ProteinID:
XP_016149678
UniProt:
A0A672R748
LinkDB
All DBs
Position
Unknown
AA seq
690 aa
AA seq
DB search
MATKRKADVTVPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDAL
PYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKV
SNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVK
LLYTGDFSRQEDRHLMAAEIPSVKPDILITESTYGTHIHEKREEREARFCNTVHDIVNRE
GRCLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKI
RKAININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVI
IAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPH
VILVHGEQNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGSLADK
KCVQGQRVSGILVKKNFSYHILAPSDLSNYTDLAVSTVKQTQAIPFTGPFPLLLSQLRHL
TGDVEEIEISEKNTLRVFNSITVVHDQNVVLLEWFANPLNDMYADAVTTVVLEVQSNPKA
QKVVQPQEKKVDVNVFQDRLLKMFQDMFGEECVDFKDKNCLAVSVDAKIAFINLETRTVE
YEEANSEDDSLREMVELAVQRLYEAMNPVM
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggctacaaaacgtaaagctgatgtgactgtgcctgcagaagagagtgatcaactcctc
ataagaccactaggagctggtcaagaggtgggcaggtcctgtatcatcctggagttcaag
ggccgtaaaatcatgctggactgtggcatccaccctggattggagggcatggatgcattg
ccttacattgatttgatagacccagctgagattgacctgctcctcatcagccattttcac
ttggaccattgcggagccttgccatggtttttacagaagacaagttttaaaggaaggact
ttcatgacccatgccaccaaagccatttaccgctggttgctttcagactacgtgaaagtc
agcaacatctcagcggatgatatgctgtacactgagactgatctagaagaaagcatggac
aagatcgagaccatcaacttccatgaagtgaaagaggtggccggcatcaagttttggtgc
taccacgcaggtcatgttttgggagcagccatgttcatgattgagattgcaggagtgaag
ctactgtacacaggagatttctcccgtcaagaagacagacatctcatggcggctgagatt
cccagcgtcaaaccagacattctgatcacagagtctacatatggcacgcacatccatgag
aagagagaggagagagaggctcgtttctgtaacacggtccatgacatagtgaaccgtgag
ggccgctgtctcatccccgtgtttgctttgggtcgagcccaggagctgctgctcatttta
gatgaatactggcagaatcaccctgaactccatgacattcctatctactatgcctcatcc
ctggcaaagaagtgcatggctgtgtaccagacctatgtgaacgccatgaacgacaagatc
cgcaaggccatcaacattaacaacccgtttgtcttcaagcatatcagcaatcttaagagc
atggaccatttcgatgacattggccctagtgtggtgatggcatctccaggtatgatgcag
agcggtctttccagagagctttttgagagctggtgcaccgacaagaggaacggtgtcatc
atagcaggttattgcgtggaaggaacgctcgccaagcatatcatgtctgagccagaggag
atcaccaccatgtcaggacagaagcttccgctgaagatgtccgtggactatatctccttc
tctgctcatacggactaccagcagaccagcgagttcatccgagctctgaaacctcctcat
gtgatcctggtccatggagagcagaatgagatggctcgactgaaagccgccctgattagg
gagtatgaggacaatgatgaggttcacattgaggtgcacaatcctcgtaacactgaggct
gtcacgctgaacttcagaggagagaaactggctaaggtgatgggctctcttgcggataag
aagtgtgtgcagggtcagcgggtctctggcatcctggtgaaaaagaacttcagttatcac
atcctcgccccctctgacctctccaattacactgatctggccgtgagcacagtgaaacag
actcaagccattcccttcactggcccttttcccttgcttttgagtcagctacggcacctg
acaggtgatgtggaggagattgagatctcagagaagaacacgctgagagtctttaacagc
atcacagtggttcatgatcaaaacgtggtcttgttggagtggtttgccaatcctctgaat
gacatgtacgctgatgccgtcaccacagtggtgctggaggtgcagtcaaaccctaaagct
cagaaagttgttcagccccaagaaaagaaggtggatgtgaatgttttccaggacagatta
ctgaaaatgttccaagacatgtttggagaagaatgtgtcgactttaaagacaagaactgt
ctcgctgtaagtgtagacgcgaaaattgccttcatcaacctggaaacccgaaccgtggag
tatgaggaggccaattctgaagatgattctctcagagaaatggtggagctcgctgtacag
aggctgtatgaagccatgaaccctgtcatgtga
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integrated database retrieval system
