Sinocyclocheilus grahami (golden-line barbel): 107601903
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Entry
107601903 CDS
T04918
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107601903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgh03019
]
107601903
Messenger RNA biogenesis [BR:
sgh03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
107601903
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
107601903
NCBI-ProteinID:
XP_016149742
LinkDB
All DBs
Position
Unknown
AA seq
461 aa
AA seq
DB search
MSATEAEKTADDDTDWLYGDDNFDEEETTEKEVFSALIGDVDGMNGLNYQESESDSDDDD
DVCVTIGDIKTGGSQGSSFGSSSISLNIKPSVSGSKSRGLDLDAEGNVLQVDVESFEEKP
WRKPGADLSDYFNYGLNEDTWKAYCDKQRRLRMSLEILSLGSSSKIMVHQNSSSDLSEHS
SRKSSGSINVIGGQAGTISRVEGRRCHSADENNIQVMSEQSSDTELSSPKLLPFFPPNIP
PPPFPPPSIGTTPPLIPPPPGFPLPPGAPPPMIPPLDSRRLAGGYDRRSATSYLFSAGVY
SPAVGMALWSGVIDSEKAWENYNRHNKERVREKTRERGHKKERERERYRETDREHSPSSQ
DHRSEEERVSRHRDHSHYGSKRYRESSGRDGMRDRYRERRHRDRNEQHRSSHSGSSRRRH
DSDDADSHRRHRHKRSRHNRGSLEPSEECSVDQENQSEATE
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccacagaggcagagaaaacagctgatgatgacacggactggctttatggagat
gacaattttgatgaagaagagacaacagaaaaagaagtgttcagtgctctgattggtgat
gtggatggcatgaatggactcaattaccaggaaagtgaatcagacagtgatgatgatgat
gatgtctgtgtgaccatcggtgacattaaaacaggcggatctcagggctcgtcatttggt
tccagttccatcagtctgaacataaagccctctgtatcaggctccaagtccagagggctg
gatctggatgctgaaggcaatgtcctgcaggtggatgtggagtcctttgaggagaagcca
tggaggaagccaggtgcggatctgtctgactactttaactatggtttaaatgaggacacc
tggaaggcatactgtgacaaacagagacgactacgcatgagcctagagatcctgagcctg
gggtcatcaagcaaaataatggttcatcagaattctagtagtgatctgtcagaacactca
tccaggaagtcgagtggttcgatcaacgttatcggaggacaagcaggtaccatcagtcga
gtggaaggcagaagatgtcacagcgctgatgaaaataacatccaggtcatgtcagagcag
tcctcggacacagagctatcttccccaaagctgttgcccttctttcctcccaatatccca
cctccacctttccctcctccctccatcggcaccacaccacccctcataccaccgccaccc
ggtttcccattacctcccggtgcccctcctcctatgataccaccattagatagtagacgt
ttggcgggaggctatgatcgacgctcagctacatcttacctattctccgcaggtgtgtat
tcacctgcagtgggcatggctttatggtcaggtgtgatagacagtgaaaaagcatgggaa
aactacaaccgccataacaaagaaagggtgagagagaaaaccagagaaagaggacacaag
aaagagcgggagagagaacggtatagagaaacagatagagaacacagtccgtcctcacaa
gatcacagaagtgaggaggagcgtgtgtctcgacacagggatcacagtcattatggaagc
aagaggtacagggaaagctcaggaagagacggaatgagagacagatatcgagaaagacga
caccgggacaggaatgaacaacacagatcctcacacagtggcagcagtaggaggcgtcat
gatagtgatgacgcagatagccacaggagacacaggcacaaacgctctagacacaaccga
ggaagccttgagcccagcgaggagtgcagtgtggaccaggagaaccagtcagaggccaca
gaataa
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