Sinocyclocheilus grahami (golden-line barbel): 107602070
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Entry
107602070 CDS
T04918
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sgh03041
]
107602070
Spliceosome [BR:
sgh03041
]
Common components
Common spliceosomal components
General mRNP proteins
107602070
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
PRP38_assoc
RRM_occluded
RRM_5
RBD_DEAH11
RRM_7
CDC45
Motif
Other DBs
NCBI-GeneID:
107602070
NCBI-ProteinID:
XP_016149994
UniProt:
A0A672QNM2
LinkDB
All DBs
Position
Unknown
AA seq
525 aa
AA seq
DB search
MADDLDIEAMLEAPYKKDDNKSLSTNGHEERSKKKKKSKSRSRSRSRERKRSRSHDRKKS
HDRRRSRSKDRKRSRSRDRRRSRSRSRERGGRYRAPFSGLKFNGGPRGKTGPPPAIKLSR
KRSRSRSPFKKDKSPIRKPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSAVGKVRDV
RIISDRNSRRSKGIAYIEFVDTTSVPLAIGLSGQRLLGVPIIVQASQAEKNRAAALANNL
QKGSSGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFADAE
CAKKALEQLNGFELAGRPMKVGHVTERTDASTASSFLDNDELERTGIDLGTTGRLQLMAR
LAEGTGLQIPPAAQQALQMSGSMVAMAAATAAMNPGLSFNLNVPTNQALNLPSQPIATHC
FQLSNMFNPNSENDLGWEIEIQDDVIEECNKHGGVIHIYVDKKSAEGNVYVKCPSIPAAM
AAVSALHGRWFGGKMITAAYVPLPTYHNLFPESVQATQLLMPSRR
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgatttggacattgaagcaatgctcgaggctccatataaaaaggatgacaac
aagtccttaagtaccaatggccatgaggagcggagcaagaagaaaaagaagagcaaaagt
cgcagcagaagccgaagccgggaaaggaagagaagcaggagtcacgatcgcaagaaaagt
cacgaccgcaggaggagccgcagcaaagatcggaagcgcagccgcagcagggatagacgg
cgcagccgttccaggagcagggagcgtggtggtcgctacagagctccattttctggcctg
aaatttaacggtggtcccagggggaagactggcccaccacctgccatcaaactaagccgt
aaaaggtctagaagccgcagtcctttcaagaaagacaaaagccctataagaaagcccatt
gataatctcacccccgaagaaagggatgcacgcacagtgttctgcatgcagctggcagcc
agaatccgaccacgagacttggaagaatttttttctgcagtgggaaaagtgcgagatgtg
agaattatctctgatagaaactctagaagatctaaaggaattgcatacattgagtttgtg
gataccacctctgtacctttggcaattggcctgtctggtcaaagactactcggagtacca
atcattgtgcaggcttcacaggctgagaaaaacagagccgctgcattggccaacaactta
cagaagggcagttctggacctatgagactttatgttggctcattgcattttaacatcaca
gaagacatgctccgaggcatctttgagccatttggaaggattgaaagtatacaactgatg
atggacagtgaaacaggacgatcaaaaggatatggctttatcacatttgctgatgccgaa
tgtgctaagaaggctctggaacagcttaatggctttgagttggctggcagaccaatgaaa
gtgggacatgtgacggagcggactgatgcctccactgccagctccttcctggacaatgat
gagctggaaaggacaggcattgatctgggaactactggtagacttcaactcatggccaga
ctggccgagggtactggtctgcagatcccacctgctgcacaacaggcccttcagatgagt
ggctccatggtagccatggctgcagctactgctgctatgaaccctggattgagttttaac
ctcaatgtgcccacaaaccaagctttgaatctaccatcacaaccaattgcaacgcactgt
ttccagctgtctaacatgttcaatccaaactcagaaaatgatcttggttgggaaattgag
attcaggatgatgtcattgaggagtgcaacaaacacggtggagtcatacacatatatgtg
gacaagaaatcagctgaaggtaatgtctatgtgaagtgtcccagcattcctgctgctatg
gctgcagtcagtgcattacatggacgttggtttggaggtaaaatgatcacagcagcttat
gtacctcttcctacataccacaaccttttcccagagtcagtgcaggcaacacagcttctt
atgcccagtcgccggtga
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