Sinocyclocheilus grahami (golden-line barbel): 107602125
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Entry
107602125 CDS
T04918
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04140
Autophagy - animal
sgh04148
Efferocytosis
sgh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107602125
04148 Efferocytosis
107602125
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
107602125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sgh04131
]
107602125
Membrane trafficking [BR:
sgh04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
107602125
Hops complex
107602125
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_Vps41
Lact-deh-memb
zf-RING_16
zf_RING_Vps8
zf-C3HC4_2
DUF2229
zf-ANAPC11
zf-RING_11
zf-rbx1
zf-RING_5
DUF5600
zf-C3H2C3
KNOX2
Apolipoprotein
DUF1664
DUF2175
zf-RING_UBOX
DUF4446
zf-C4H2
Motif
Other DBs
NCBI-GeneID:
107602125
NCBI-ProteinID:
XP_016150024
UniProt:
A0A672SET4
LinkDB
All DBs
Position
Unknown
AA seq
974 aa
AA seq
DB search
MASILDQYEDSQNIRQHSRVSAANIGITHSGFVNVRLEEEKPIFNKQRIDFSPPENINHF
SVCNNQLCMSLGKDTLLRIDLGKPDQPNQIELGRKDDSKVHKLFLDPTGSHLVISLTANE
CVYLNRNTQKVRSLSRWRGHLIESIGWNKLIGSETNTGPILVGTSQGIIFEAEISASEGS
LFNTNPDQYFKQVHSLEEDGKPAPVCCLEVERGLESKYFIVATTRKRLFQFVGKLAEGSE
QQGFSSIFAQNQDLLPSFQEFPVNMGYSEITFYTSKLRSSPKTFAWMMGNGVLYGQLDYV
RPDSLLSDVQVWEYTSDIDLNCVKPISIVLTQFHFLLLLPDRVKGICTLNGQVVHEDVFP
EKFGTLKKMIKDPITGLVWIYTEKAVFRYHIQREARDVWQMYMNMNKFDLAKEYCKDRPE
CLDTVLAKEAEHCFQNKRYLESAKCYALTQNYFEEIALRFIEAKQEEALKEFLIKKVTNL
KPTEKTQITLLVTWLTELYLNRLGQLETDDGKQHLFLETREEFRTFLKSPKHKECFYNNR
NTIYDLLASHGDVDNMVYFSVIMQDYERVISHYCQHDDYSAALDVLSKHCDDKLFYKFSP
VLMQHIPKKVVDAWIQMGNRLDPKNLIPALVNYSQMGSMQQINETIRYMEFCVYELEVKD
EAIHNYLLSLYAKHKPDSLLWYLEQAGTHVSDIHYDLKYALRLCAEHGYLQACVLVYKIM
ELYEEAVDLALQVDVDLAKSCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMNCLSSC
NLLKIEDILPFFPDFVTIDHFKEAICNSLEEYNQHIEELKQEMEEATESAKRIREDIQEM
RNKYGVVESQEKCATCDFPLLNRPFYLFLCGHMFHYDCLLQEVIPHLTSYKQNKLEELQK
KLAATTQTTKSRHRPREEDTVSLGKGQGSREQIKSDIDDIIACECVYCGELMIKSIDKPF
IDPQKFDQEMSSWL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcatctattctggatcaatatgaagattctcagaacatccgtcaacacagccgtgtg
tcagcggccaacatcgggattactcattcagggtttgtgaatgttaggttggaggaagag
aaacctattttcaacaagcagcgcatcgatttctcacctcccgaaaatatcaaccatttc
tcagtgtgcaacaaccagttatgcatgagtctggggaaagacaccctgctgagaattgat
cttggaaaacctgatcagccaaatcagattgaactgggaagaaaggatgatagcaaagtg
cacaaacttttcctagatcctacagggtcacatttagtcatcagcctcaccgcaaacgaa
tgtgtatacctaaaccgaaacactcaaaaggtccgaagtctgtcacgatggagaggtcac
ctgattgaaagcataggatggaacaaattaatcggctctgagaccaacactgggccgatt
ctggtcggcaccagccagggaatcatctttgaagcggagatctctgcctcagagggctct
ctgttcaacactaacccagaccagtacttcaaacaggttcattccctggaggaggatggt
aagccagctccggtttgttgcctcgaggtggaacgtggtttggaatccaagtacttcatt
gttgcgaccacacggaaacgcctttttcagttcgtaggaaagctggcagagggatccgag
cagcaggggttcagctccatctttgcccagaaccaggatctcctacccagcttccaggag
tttccagttaatatgggctacagtgagattacgttctacacgtcaaagctgcgcagctcc
ccgaagacctttgcatggatgatgggaaatggggttttgtatggacagctagactatgtg
cggcccgactctctactcagtgatgttcaagtgtgggaatacacatcagacattgattta
aactgcgtcaagcccatctctatagtactcacacagtttcacttcctgctcctgctccca
gatcgcgtcaagggtatctgcactctgaatgggcaggtagtgcacgaagatgtgtttcca
gaaaagttcggcactctaaaaaagatgatcaaagaccccatcactgggctcgtgtggatc
tacaccgagaaagctgtgtttcgctaccacatccagagggaggcgcgggacgtttggcag
atgtacatgaacatgaataagtttgacctggccaaagagtactgcaaagaccgacctgaa
tgcctagatacggtgcttgccaaagaggcggagcactgcttccagaacaagcgctacctg
gagagcgccaaatgctacgctctcactcagaattactttgaggagattgcgctgaggttc
atcgaggccaagcaggaggaggccttgaaagagtttctgattaagaaggtgaccaacctc
aagcccaccgagaagactcagatcaccctgctggtcacctggctgacagaactctatctg
aaccggcttggtcaactggagaccgatgacggcaaacaacatctctttctggagacccgc
gaagagttccgcacctttcttaaaagccccaaacataaagagtgcttctacaacaatcgc
aacaccatctacgacctgctcgctagtcacggcgacgtggacaacatggtgtatttctcg
gtcatcatgcaagattatgaacgcgttatatctcattactgccagcatgatgactacagt
gcagctttagatgttctctccaaacactgcgatgacaagctcttctacaagttctcccca
gttctcatgcagcacatccccaaaaaggtggtcgatgcatggattcagatgggaaatcgg
ttggatcccaagaatctgatcccagcactggtgaactacagccagatgggcagcatgcag
cagataaatgagaccatccggtacatggagttctgtgtgtatgagctggaagtcaaagac
gaagccattcacaattacttactctcgctttatgccaaacacaagccagattctctgttg
tggtacctcgaacaagcgggaacgcacgtctccgacatccactatgacttgaaatatgcc
ttgcgcctttgtgccgaacatgggtacctgcaggcctgcgtcttggtttacaagattatg
gagctgtatgaggaagctgtggatctagctttacaggtggatgtagatttggccaagtct
tgcgccgaccttccagaggatgacgaggagttgaggaagaagctgtggctgaagattgct
cgtcatgtggttcaggaggagaaagatgtcaagaaggccatgaactgtctgtccagttgc
aaccttcttaagattgaggacatcttgcctttctttccagattttgttacgatagaccac
ttcaaggaggcaatttgcaactcccttgaagagtacaaccaacacattgaggagctgaaa
caagaaatggaggaggccacagaaagtgccaaacgcatccgtgaagacatccaggagatg
aggaacaagtacggggtggtggagtctcaggaaaaatgtgccacctgtgatttccccttg
ctcaaccgacctttctatctcttcctttgtgggcacatgttccattatgattgcctctta
caggaagtcatccctcacctcacttcctataagcagaataaattggaggagctacagaag
aagctggcagcgaccacacagaccaccaaatccaggcacaggcccagagaggaggatacg
gtcagcttaggcaagggtcaaggaagcagagagcagatcaagtctgatattgatgacatc
atagcgtgtgagtgtgtctactgtggtgagctgatgatcaaatccattgacaagcctttc
atagatccacagaagtttgatcaagagatgtccagctggctctga
DBGET
integrated database retrieval system
