Sinocyclocheilus grahami (golden-line barbel): 107602136
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Entry
107602136 CDS
T04918
Name
(RefSeq) WD repeat-containing protein 75-like
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107602136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sgh03009
]
107602136
Ribosome biogenesis [BR:
sgh03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
107602136
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR75_2nd
Beta-prop_WDR75_1st
WD40_WDHD1_1st
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_EML
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_RIG_2nd
PEP5_VPS11_N
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_HPS5
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Beta-prop_IP5PC_F
WD40_RFWD3
DUF1623
Motif
Other DBs
NCBI-GeneID:
107602136
NCBI-ProteinID:
XP_016150032
LinkDB
All DBs
Position
Unknown
AA seq
844 aa
AA seq
DB search
MAITVVSVKKVLLLRTLPLKLNEEVVEEYGSHRFMLSHGCRFVLCASGDLVKVYSTRTEE
WLHSLQGHTNQVTGIALNPANHLQVYSCSADGTVKLWDFIDGILIKTFIIGYPLFAIYVS
EKHEGVLFLHVSMATDSKNECFQLVAVHLPKSAEQEVEAKEMSVVSSHISSNPSCTAFGR
GGEYIAFARRLQLNVYFFRKQKTCSFSLKATDKKGAQNAFTCITCHPTDDCIATGHEDGK
IRLWRNFIHKKEYTYSTQHWHHNAVNTLCFTPEGTHLLSGGIESVLVQWQYGAGNRKEFL
PRLGGSILHISASSDGQLFCTSHSDNKITVIESSFKVCGVLQGLVKGDAVLTDLMIDPRS
KALVLNGKPGHLQFYSLLRDKHLYNLDIVQQEYIYEAGLDQFEVAKAAFDIKGSWLATVE
ERGQKSSDLEFFLKLWAFDERTQSFVLNTTITAAHTDRIISMCFSSSEETTMLVTIAEDG
QFKAWCQGADADTQQNQNFWSCDFVGSYHNLKPTNCSFSADSSLLAVSFQEVITIWSPET
WEMLTTLCQPPGIIRDLCFGRLSCSKYLLGTTTRNLLCCWNLLTCALEWSSSVEVSKLQP
DPLSENVAAFSYQSKHTDLFVFKPSEPRPLFTNKNVCSEKVHRAVFVPREELLNNCDESS
QWLNRSQLYFLTQNMDLLTFSTATEEDRMLSSSKQLVIDDSVAVTPFYLLLGKHRQQQQK
LNTQSHPAADKPQQPQGSVTIKELLHTPAHVLPAASVLCSMFVNSLLISNTGVQQDCLRE
EMDSEKEEEDSEEEMEACDSQQELRVQGSVDEVMLKLSKAQERELKRVRKTDFSWMADLI
DSKP
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggctattactgttgtgtctgtgaagaaagttctgctcctgagaacactgcctctcaag
ctgaatgaggaagttgttgaagagtacggtagccatagattcatgttgtctcatggttgc
aggtttgtgttgtgcgcctctggggatctagtgaaggtctatagcacacgcacagaagag
tggctccatagtctgcagggccacaccaaccaagtgacaggcatcgctttgaatcctgcc
aatcatctgcaggtttactcttgttcagcagatggcactgttaaattatgggacttcatt
gacggcatccttatcaagacatttatcattggataccctttgtttgcaatatacgtgtcc
gagaaacatgagggagtcctttttcttcatgtttcaatggctacagattccaaaaatgag
tgtttccagttggttgccgtacatctgcccaagtcagcagagcaggaggtggaggccaaa
gagatgtctgttgtttccagtcatatcagctcaaaccccagctgcacggccttcggtaga
gggggggaatacatagcatttgccaggcgtctccaacttaatgtttatttcttcaggaag
cagaagacgtgcagtttttctctaaaagccacagataagaaaggagcccaaaacgcattc
acatgcataacctgtcacccaacagacgactgcatcgccaccggccatgaagacggaaag
atccgcctctggagaaacttcattcacaaaaaagagtacacatattccacccagcactgg
catcacaatgctgtgaacactttgtgttttactccagaaggcactcatctgctgagtgga
ggcattgagtcagtgcttgtccagtggcagtatggggcaggcaacagaaaagagttcctg
ccccgtctcggaggatccattctacatatatcagcatcatctgatgggcagttgttttgc
acctctcattcagacaacaagatcacagttatcgagagcagctttaaagtgtgtggagta
cttcagggtttagtcaaaggagatgccgttttgaccgatctaatgattgacccgcgcagt
aaagctttagtgctgaatgggaaaccgggtcatttacagttctactccctgctgcgtgac
aagcatctctacaatctggacatagtgcagcaggaatatatttatgaagcgggtctggat
cagtttgaagtggcgaaggctgcttttgacataaaagggtcctggcttgctacggtggag
gaaaggggacagaaatcctctgatcttgagtttttcctcaaactgtgggctttcgatgaa
agaacgcaaagtttcgtactgaacactaccatcactgctgcccacacggatcggattata
tccatgtgcttcagctcttctgaggagaccaccatgctggtgaccatagcagaagacggc
cagttcaaagcatggtgtcagggtgctgacgcagacacacaacagaaccagaacttctgg
tcgtgtgattttgtgggcagctaccataacctaaagcccacaaactgcagtttctcagcc
gatagctctctcctggcggtgagcttccaagaagtcattaccatatggagcccagaaacc
tgggagatgctcaccaccctctgccaaccacctggaataataagggacctttgtttcggc
cggttaagctgctccaaatacttgcttggcacgaccactagaaaccttctctgctgctgg
aatctcctcacttgtgcattggagtggagctcatctgtggaagtttccaagctgcagcca
gaccccttgtcagaaaatgtggccgccttttcataccagtctaaacatacagacctgttt
gttttcaaacccagcgagccgcggcctctgttcaccaataagaacgtgtgttcagagaag
gtacaccgtgccgtctttgttcctcgagaagagctgttgaacaattgtgacgaaagttct
cagtggctcaacagatctcagctgtacttcctcacccaaaacatggatttattgaccttc
agcacagcaacagaggaggacagaatgttgtcttcaagtaaacagcttgtcattgatgac
agtgttgctgtaacaccattttacctgctgttgggcaaacacagacaacagcagcagaaa
ctcaacacacagtcccatccagcggctgacaaaccccaacagccacagggctccgttacc
atcaaagaattgttacacacaccagctcatgttctacctgctgcgtcagtcctgtgctca
atgttcgtcaattccctcctgatctccaacactggagtccagcaagactgcctcagagag
gaaatggacagtgagaaagaggaagaggactctgaggaggaaatggaggcatgtgatagt
caacaggagctcagagtccagggttcagtggatgaggtgatgctgaagctttctaaagca
caagagagagaactgaagagggtcagaaagactgacttcagttggatggctgacctcatt
gactccaaaccatga
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