Sinocyclocheilus grahami (golden-line barbel): 107602158
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Entry
107602158 CDS
T04918
Name
(RefSeq) obscurin-like protein 1 isoform X1
KO
K19574
obscurin-like protein 1
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sgh03036
]
107602158
Chromosome and associated proteins [BR:
sgh03036
]
Eukaryotic type
Centrosome formation proteins
3M complex
107602158
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
V-set
Ig_MYOM1
VEGFR1-3_N_Ig-like
Ig_6
Ig_5
Ig_4
Izumo-Ig
BiPBP_C
Ig_SEMA-3_4_7A
VEGFR-1-like_Ig-like
Ig_C17orf99
C2-set_3
Motif
Other DBs
NCBI-GeneID:
107602158
NCBI-ProteinID:
XP_016150058
LinkDB
All DBs
Position
Unknown
AA seq
3149 aa
AA seq
DB search
MDVFGGAPRFLAYPRPVVVQSGTDAVLKCQIGGDPRPAVIWERNNEKIHPEGRYRVFEDG
NVYNLIITSVTMEDSGQYICKAKNCIGETYAAATLKVEGEAQEMEFREENKPRFLIKPLS
TRVGRGEDAVFSCKLWGNPRPEVMWEKDGKKLNEIFESTHFAISYQDGGWFQLKIFKTRA
PDGGVYTCKARNEFGESLAGAVLLVDAGPGHEDEGNRNGYTNGHWKAHQGKQRSGRQVAT
RLKDDPLPNSAKVKMFAVTEGKHAKFRCYVTGKPKPEILWRKDGRLILSGRRYLLYEDRE
GYFTLKVLYCKQQDNGVYVCSASNTAGQTLSAVHLFIKEPPVRFKQPLNDLQVWERDLAV
LECEVPEDTVPITWYLEDRRLQPGAKYGMEEWGTKRRLTIRDIGVDDDGIYLCEMADGGR
SIAEVAVKGTIVRKLPRKVDVLEGENAAFCVEVEEEEMDIHWYKDGTELRETHQTILKSF
GRTHILVFVNTTPQDSGMVMFYVGRSKTSSQLRVKAARHCPPSCPIGVQINTERANAALL
SWFPAQDSRKNPPSGYIIERQEVGSQEWLQCLTTDSATSVEILGDSVPCEADYRFRICSV
NKYGRSGNVEFPRAVHLVPVARIQAPLQDALVPEGQDACFTIELSASVIGTWFLNGNQLQ
DDDRFSIRRSRTHQSLRIRGVRDTDNGSEITFIAYGIRDSAALYIQAPLVKFTPLSEMDR
NKFVEVGNPIVLYCELSDPEAPVRWYKNGVELQSMEGLHIQSEGTMRRIVIQSADFSHSG
VYSCDAIDDIIRFNVEVEAPLVRFSVLPEDERNKSIEAGSLIVLQCELSDPLAQVSWYKD
GVKLLPQSGLDFKSKGTKRQLIVQSAEFYHSGVYSCKTRGDAVHFNVDVKAPPVRFSAVP
EVKRRKCIEAGCPIVLQCEVSDSTAQVQWYKDGDQLLVESEVDFKSDDCMRTLSIQSAHP
SHAGVYSCTTKDDVIKFHVEIRAPSVRFSAVPEAETNKCIEAGGHFELHCKLSDPTAQVS
WFHNDTQLQPETGLDIQSEGDVRTLVVNPAEPSHSGLYRCESSDDSVQFTVDIKDPPVMF
SALPDTVKNQLVEADYSTDLHGEISGPNANVCCYKDGVELVSKSQPHIKSECTRRTLAVK
TAQPSNSGWYDCVRTGDAIQFNVQDQASRTNSTPVCGMDESIDADCSRVLLTEKSDHTIQ
EKLISCQEDETTVIFNKPTTQKELIQSSEMCLQEAYETVTKDEFVVHQEEVKEPCHKAEF
FTLPPEDEVVRPTEGDSPVHCYKDRMQFYSENGHTLEESVRRLNVPVIGSGQSGVNNYKA
KDDDIIFKVDVKATSLQTSSIHETDRSKSNDGTDIANFPQPEVSSTMAEVFWYKEGEELQ
ECDIITRSKETFRALVVKTAEPSHSGEHACETDDVTVQFAYLPAPPVTFSSVPEAQRTIC
IESGRPFKLQCEVSDPDAQVWWYKDGNELLPQDGMVTVYEEAVRTLSVQSAELCHSGTYS
CQTNNDAISFHVEIKAPSLKFMPISEVEKNKSTEVDSPNVLKCDLSDATTEVLWCKDGRE
LAPNPGLNFQTDGNMRKLTVQSAELSDTGNNTCHAPGDTVSFKVDVQAHPVRFSALPEIA
RNKFIEAGCPIILQCEISDPTAQVSWLKDGVELLQDSGLDIQSEGTMKRMIIKSAELKNS
GVYSCEAVDDRIAFKVDVAAPPAMFSAVPEIEKSKSVEAGWPIILQCEISDPTALVQWYK
DGLQLLPQSGVYIQSQHTMRTLVIQSANVSHSGFYSCNTADDISEFFVDVKAPPVTFAYI
PEDDLHRNIVEQDNLLLCCQVSRSDATAQWYKDGVELKPSDNVLIEAENTIRRLIVLSAQ
LSDSGTYTCRAGDSALIFKVNVREPPVMIVYPKEDVHLDRYVPEEIVLSCELSRPNGKVT
WFKDGQKLQESENIKLKSEGPYRRLKILRSGVEDSGEYVCDTADDSIFFNLNIKEPPVRI
VSPSQSQMELCQQTSERMVLSCEISRPNATVRWYRDGLEVEESDSLILEVDGVYRRLIIP
KPTVKDSAEYVCDTADDSVTFFVNIAEPPVRFIRPRKMAYGVEKLVGDIVVLECEVSRPN
AEVSWKKDAEEIEENSNITITEDGTSRQLTIHSTAFEDAGQYICDARDDVMDFLVKIKDP
PLKILRKADIETKRRFVVSDAIVLKCEISRPNGVVSWLKDNEKIEGNEHFICEEEVTFRS
LIVLSAELKDSGEYICDAQDDKVVFSVTVEEAPVSIVGNSEKPEHHILKTGDELILECAV
SQVNAIVQWYFNGRLLQEDSRTHIESRDTTRKLVISELQISDSGEYLCDAIDDKMTTRLT
VQVPPFKFIKKDERTNISAYEEDSVTLRATVNRVNAPVIWQRGHDPVRGDRFHTTSDGNT
HYLTINPLKRSDTGEYTCHVGSDEMHFSVHVKAMKVKFSKPLENVVGLKGSDVVLKCELY
KSKGDVQWLKGSQEIAPNRHFTIRAEGRVRSLTIHDVTEEDAGEYACESKDERTSATVVV
NIPRIVEFIAELHNITVMEGEDAIFKCVVSPEDAKLAWFKNGQPISSNEKFNISSNGLCH
MLHINNCQVSDSCKLTAEAEGVISRAILQVQEAQVLFTKSMDPVVAEEFGEATLEVEVSL
ETAEVQWMRQGVVIHPGSKFTLKQNGQKRSLTIHKLTLSDRGTYSCETLHDRTQAKLTVE
PRKIKIQKDLTEIQTYERETASFEVELSHGNVDGVWQKDGHILKNNNRLRMTAKGRVHSL
TISNLTLDDTGTYIFYVENIRSLTRLEVKEIPVSILKKLEDIRQPEGSAVTLECELSRHN
VDVKWTKNEVQLKPGKNHRIYSMGRKCFLQILKCELGDSGLYVCDAGDATTSCSVDIYER
ELEILQSLEDLDIQEGQNAVFMCEVSLDDVPREWFKNGEKIKSTSTIKIRQEGTKHFLLI
CNVKEDDSGEIKFVAKNVETTAYLEVEALPANIVKPLQDKTALEKTRVILDCTVTNPRCS
IRWYKGPNVILPSERFEICSEGCYRKLVIQQVLLEDEGTYSVQVGNYTSSAKLTVEALSV
LMVRELQDVDVTAPADACFECEVSLPVAKAPTWTLNGETLHPGPKVVVGKMGTIHRLILK
QTSEDMSGTVCFITGRVKSTAHLQVISNH
NT seq
9450 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgtttggaggagcaccacggttccttgcctaccctcgtcctgtggtagtacaa
agtggcacagatgcagttctgaaatgccagattggtggggatcccagaccagcagttata
tgggagagaaacaatgagaagattcatccagagggaagataccgggtgtttgaggatggc
aatgtctataaccttatcataacttctgtgacaatggaggacagcgggcaatacatctgc
aaggccaagaactgcattggagagacttacgcagcagccactttgaaagtagaaggtgaa
gcacaggagatggaatttcgggaagaaaacaagccccgcttcctcatcaagcccctctcg
actagagttggacgaggagaggatgctgtgttctcctgtaagctgtggggaaaccctaga
ccagaagtgatgtgggagaaggatggcaagaagttgaatgagatctttgaaagcacacat
ttcgccatcagctatcaggatggaggatggttccaactaaagattttcaagacaagagca
ccagatggaggggtgtacacatgtaaggccaggaatgaatttggagagagtctggcaggg
gctgtgctgttggtggatgctggaccaggacatgaagatgaagggaatcgtaacggatac
actaatggccactggaaagcacatcagggaaaacagagaagtggtaggcaggttgcgacg
aggctgaaagatgacccactgccaaactcagccaaagtgaaaatgtttgcagtgacagaa
gggaaacatgcaaagtttcggtgctatgtaacagggaagccaaaaccagaaatattatgg
aggaaagatgggagacttatcttgtctgggagacggtatcttttgtatgaagacagagag
ggttacttcacacttaaagttctctactgcaaacaacaggacaatggagtttatgtctgt
tctgcttcaaacactgcagggcaaaccctgagtgctgtacaccttttcatcaaagagcca
cctgtccgatttaagcaaccacttaatgacttgcaagtatgggagagagacctggctgtt
cttgagtgtgaagttcctgaggacactgttccaatcacgtggtacttagaagacagacga
ctacagcctggagccaaatatgggatggaggagtgggggacaaagcgacgactcacaatt
cgtgatattggagttgatgacgatgggatatatctctgcgagatggctgatgggggcaga
agcattgctgaggtagcagtcaaaggtaccattgtaagaaagctgccacgaaaagttgac
gttctggagggggaaaatgcagccttctgtgtggaagtggaggaggaggaaatggacatt
cattggtacaaagatggaacagaactaagggagacccatcagaccattctcaaatccttt
ggaaggacacacatcttggtttttgtcaacaccacaccacaagactctggtatggtcatg
ttctatgtgggtagatcgaagacgtcatcgcagctacgggtgaaagctgcaaggcactgt
ccaccaagctgtcctatcggggtacagataaacacagaacgagcaaatgcagctctcctt
tcctggtttccagcacaagactctcggaagaatccaccttcagggtatataattgagagg
caagaggttggctcacaggagtggctacaatgtttaaccacagactctgcaacttcagtg
gagattcttggtgacagcgttccatgcgaggcagactacagatttcggatatgcagtgtc
aacaaatatggaaggagtgggaatgtagagtttcctcgagcagttcaccttgtcccagtt
gccagaatccaagcacctctacaagacgctttagtgccagagggccaggatgcctgcttt
accattgaactctctgcctcagttataggcacttggttcttaaatggaaatcagcttcaa
gacgatgaccgtttctccataaggcgttcgcgtacacaccagtccctacgcattcgtggg
gtacgggacacagacaacggatcagagatcaccttcattgcctacggaattcgagattct
gctgctttgtatatacaagctccactggtaaaattcactccactttctgaaatggatcga
aacaaatttgtggaggttggcaaccctattgtgctctactgtgagctgtcagaccctgag
gctccagttcgttggtataagaatggtgttgaacttcaatcaatggaaggtctgcacatc
caatcagagggaacaatgaggaggattgtcatccagtcagctgatttctcccactcagga
gtttatagttgtgatgctattgatgacatcatcaggtttaacgtggaggttgaggctcca
ctggtgaggttctccgttcttccggaggatgagaggaacaagtccattgaagcaggctca
ctgatagtactgcaatgtgagctctcagatccactcgcccaggtctcctggtataaagat
ggtgtgaagcttctaccacaaagtggactagacttcaagtccaagggcacaaagaggcaa
ctgattgtccagtcagctgaattttaccactcaggggtgtacagctgcaagacaaggggt
gatgctgtacacttcaatgtggatgttaaagccccacctgtgaggttctctgctgtccct
gaggttaagcggagaaagtgcattgaagcaggctgccccattgttctgcaatgcgaggtt
tcagactctactgcacaggtccagtggtacaaagatggggatcagctccttgtagaatct
gaagtagacttcaaatcagatgactgcatgagaacactcagtattcaatcagcacaccca
tctcatgccggtgtgtacagctgcacaacaaaggatgatgtcatcaagtttcatgtggag
atacgagctccatcggtgaggttctcagctgttcctgaagctgagacgaataaatgcatt
gaagctggtggccactttgaactccactgtaagctctcagaccctacagcccaagtcagc
tggttccacaacgatacgcagcttcagccagagactggtttggatattcagtcagaggga
gatgtaaggacactggtagtcaatccagctgagcccagtcattctggattgtaccgctgt
gaatcatctgacgactcggtccagttcactgtggatatcaaagatccaccggtgatgttc
tcagcattaccagacacagtgaagaaccagctggttgaagcagactactccactgatttg
cacggtgagatctcaggtccaaatgccaatgtgtgttgttacaaggatggtgtagagctc
gtctcaaaaagtcagcctcatatcaaatcggagtgtaccaggaggacgttagctgtcaag
acagcacagccctctaactctggatggtacgactgtgtgagaactggtgatgccatccag
tttaatgtacaagaccaagcctcgaggacaaattccacaccagtttgtggaatggatgaa
agcattgatgcagactgttccagggtactgctaactgagaaatccgaccacacaatccaa
gaaaaacttatatcctgccaagaagatgagacaaccgtaatattcaataaacctacaaca
cagaaagagctcatccagtcatcagagatgtgtttgcaagaagcatatgagactgttacc
aaggatgaatttgttgtacatcaagaggaagtgaaagaaccttgtcataaagcagaattc
tttacactaccaccagaagatgaagttgtcagacccactgaaggtgattctccagttcac
tgttacaaggacagaatgcagttctactctgaaaatggacatacgcttgaggaaagtgtg
cgaagactgaatgttccagttataggctcgggtcaatcaggcgtaaacaactacaaggca
aaggatgatgacataatatttaaggtggatgtcaaagctacatctttgcaaacttcatct
atccatgagactgacaggagcaagtcaaatgatggaacagatattgctaattttccacaa
cctgaggtatcgagcacaatggcagaggtgttctggtacaaggaaggcgaggaactccaa
gaatgcgacattatcacgcgatctaaggagactttcagagctcttgttgtgaaaacagcc
gagccgtctcactctggagaacatgcttgtgagacagatgatgtcaccgtccagtttgca
tacctaccagctccacctgtgacgttctccagtgtccctgaggctcaacggaccatatgc
attgagtcaggaagaccctttaaactacaatgcgaagtctcagaccctgatgcacaagtc
tggtggtacaaagatgggaatgagttgcttcctcaagatggtatggttactgtgtatgaa
gaagccgtgagaacactctctgtgcaaagtgctgaattatgtcacagcggaacatacagc
tgccagacaaacaatgatgccatctcattccatgtggaaatcaaagctccatcactgaag
ttcatgccaatttcagaagtggagaagaacaagtccactgaagtagactccccaaatgtt
ctgaaatgtgatctatcagacgctaccacagaggtgctctggtgcaaagatggtagagag
ctggccccaaaccctgggctcaatttccaaacagatggaaatatgaggaaactaactgtt
caatcagcagaactgtctgatactggaaacaacacctgtcatgctccaggtgatactgta
tcattcaaggtggacgttcaagcacaccctgttaggttctcagcactcccagaaattgcg
aggaacaagtttatcgaagcaggctgtcccattatacttcagtgtgaaatctcagaccct
actgcccaagtttcctggctcaaagatggagtcgaactcctacaagacagtgggcttgac
atccagtcagagggcactatgaagagaatgatcatcaaatcagctgagctcaaaaactca
ggcgtgtacagctgtgaggctgtagatgatcgcatagcattcaaggtggatgttgcagct
ccaccagcgatgttctcagctgttcctgagattgagaagagcaagtccgttgaagcaggc
tggccaatcattctccaatgtgagatatctgatcctacagccctggtccaatggtacaag
gatggattacagctcctacctcaatctggggtttacatccaatcacagcacaccatgagg
acactggttatccaatcagcaaatgtatcccactctgggttttacagttgtaatactgct
gatgatatcagcgaattttttgtggatgttaaagcacctcctgtgacatttgcctacata
ccagaagatgatctgcacagaaatattgtggaacaagacaatctactcctttgctgtcaa
gtgtccaggtcagatgctactgcacaatggtacaaggatggagtagagctaaagcctagt
gacaacgtcctcatagaggcagaaaacactatacgaagactgatcgtcctgtcagctcaa
ctctcagattctgggacgtacacctgtcgtgctggagatagtgcattaatatttaaagtt
aacgtgagagaacctccagtgatgattgtatatcccaaggaagatgtccaccttgatcgc
tatgttcccgaagaaattgtcctcagctgtgaactttcccggccaaatggaaaggtgaca
tggttcaaggatggacagaaactacaggagagtgaaaacataaagctaaagtcagagggt
ccgtacagacgactaaaaattctgcgcagtggtgttgaggactcaggagaatatgtctgt
gacacagctgatgattcaatattcttcaatctaaacattaaagaaccaccagtgcgcata
gtttctcctagtcagtcccaaatggaactttgccaacagacttctgagaggatggtcctg
agctgtgaaatctctagaccaaacgccactgtacgttggtatcgagatggacttgaagtg
gaggagagtgacagcctaattctggaggttgatggtgtctataggagacttattatccca
aaacctaccgtcaaagactctgcagaatatgtctgtgacactgctgatgactcagtgacc
ttctttgtaaacatcgcagagccaccagttagatttattcggccaaggaaaatggcctat
ggagtagagaaacttgttggagacattgtggttcttgagtgtgaagtgtctcgaccaaat
gctgaagttagttggaagaaggatgcagaagagattgaggagaacagcaacataactatc
acagaggatggaacaagtcgacagttaaccattcactctacagcttttgaagatgcaggg
caatatatctgtgatgctagagatgatgtgatggatttcctagtgaaaatcaaagatcca
ccactaaaaattctgcggaaagctgacatagaaacaaaacgcagatttgtagtatctgat
gccattgtgttaaaatgtgagatctcaagaccaaatggggtggtcagttggcttaaagac
aatgagaagattgagggaaatgagcattttatctgtgaagaggaagtgacattcagatcc
ctgattgtcctgagcgctgagttgaaggactcaggggagtacatatgtgatgcacaagat
gataaagttgtcttcagtgttactgtagaagaggctccagtgtctattgttggaaattca
gagaagccagaacaccacattttaaagacaggagatgagcttatcctggaatgtgcggta
tctcaagtaaatgctatagtccagtggtacttcaatggacgtttactgcaagaggattca
cgcacacacattgaaagcagagacacaacgaggaagcttgtgatatcagaacttcagata
tctgactctggagagtatctttgcgatgccattgatgacaaaatgacaactagactaaca
gttcaagtaccaccattcaaatttatcaaaaaagatgaaagaacaaatatttcagcctat
gaagaagacagtgtgacactacgtgccactgttaacagggtcaatgccccagttatatgg
cagagaggccatgatccagtcagaggtgatcgtttccacacaacaagtgatggtaacacc
cactacctcactattaacccacttaagagaagtgatactggagaatacacgtgtcatgtg
ggatctgacgagatgcatttcagtgtccatgttaaagcaatgaaagtgaaattctcaaaa
ccactagaaaacgtagtgggactcaaagggagtgatgtggttttaaaatgtgaactgtac
aagtcaaaaggagatgttcagtggcttaagggaagccaagagattgcaccaaacagacat
tttacaatcagagctgagggtcgagtgagaagcctgacaatacatgatgtcacagaagag
gatgcaggagagtatgcttgtgaatctaaagatgaaaggacatcagcaactgtagtggtc
aacattcctcgcattgtggagtttattgcagagctacacaacataactgtcatggaagga
gaagacgcaatatttaagtgtgtggtatctccagaggatgcaaagttggcctggtttaag
aatggccagccaatttcatcaaatgagaagttcaacatctcaagtaatggattatgccat
atgctgcatatcaacaactgccaagtctcagatagctgcaagttgacagccgaggctgaa
ggtgtgatttccagagctatcctacaggtccaagaggcacaggtgcttttcacgaagagc
atggacccggtggttgcagaggagtttggtgaggcaacacttgaggtggaggtcagcctt
gagactgcggaggtgcagtggatgagacaaggagtggttatacatccagggtccaaattc
accctgaagcagaatggccaaaaacgttctctcacaatccacaaactcaccctttcagac
cgcggcacctacagctgtgaaacgcttcatgaccgcacacaagccaagctcactgtggaa
ccacgaaaaatcaagattcagaaagatctaactgagatccagacttacgaacgagagacg
gcttcttttgaggtggagctgtcacatggcaatgtggatggtgtgtggcagaaggatggg
cacattctcaaaaacaacaaccgcttgcggatgactgcaaaaggacgagtacacagccta
accatctccaacctgaccttggatgacactggcacctacatattctatgttgagaacatc
agatcactaacaagattggaagttaaagaaattccagtatcaattctgaaaaagctcgag
gatatcaggcaaccagaaggatctgccgtaacccttgaatgtgagctctcacgccacaat
gtggatgtcaagtggacaaagaatgaagttcagcttaaaccaggaaaaaatcatcgcatt
tactcgatgggaagaaagtgctttctacagatactgaagtgtgagctgggagactctggt
ttatatgtgtgtgatgctggggatgccactacctcctgttcagtggatatctatgagagg
gagcttgagatactacaaagcttagaggatctggatattcaagaaggtcagaatgcagtg
ttcatgtgtgaagtgtccctggacgatgtgcccagagagtggtttaagaatggcgagaag
atcaaatcaaccagcaccattaagattcgtcaggaagggacaaagcacttcctcctcata
tgcaatgttaaagaagacgattctggagagatcaagtttgttgccaagaatgttgagact
acagcttaccttgaggtggaagcactaccagcaaacattgtgaaaccacttcaggacaag
actgctctggaaaaaacccgcgtcatactggactgtactgtgaccaatccgcgttgcagc
attcgctggtataagggaccgaatgtcatcctgccctcagagcgctttgagatctgcagt
gaagggtgctatcgaaaacttgtgattcagcaggtgttgctagaagatgagggcacctac
agtgtccaagttggaaactacacatcttcagcaaaactaactgttgaagctctgtcagtc
ctaatggtgagagagctgcaggacgtggatgtgacagctcctgcagatgcatgctttgaa
tgtgaagtgtctttgcctgtggccaaggcacctacctggaccctgaatggggagacactg
catcctggtcctaaagttgtggtggggaaaatgggaaccattcataggctcattctcaaa
caaacatccgaagacatgagcggcacagtgtgctttatcacagggagagtcaaaagcact
gcacatctgcaagtcataagtaaccactga
DBGET
integrated database retrieval system
