Sinocyclocheilus grahami (golden-line barbel): 107602231
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Entry
107602231 CDS
T04918
Symbol
ddx55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sgh03009
]
107602231 (ddx55)
Enzymes [BR:
sgh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107602231 (ddx55)
Ribosome biogenesis [BR:
sgh03009
]
Eukaryotic type
Pre-60S particles
Helicases
107602231 (ddx55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
SBF_like
TFIIF_alpha
YbjM
Motif
Other DBs
NCBI-GeneID:
107602231
NCBI-ProteinID:
XP_016150163
UniProt:
A0A672SNI7
LinkDB
All DBs
Position
Unknown
AA seq
597 aa
AA seq
DB search
MENITDGKWERLPVKLHDSILQTLRELKFAYMTPVQFACIPLFMSNKDVAAEAVTGSGKT
LAFVIPALEILLKREEKLKKMQVGALIITPTRELALQISEVMGRFLQGFPQFRQILLIGG
SNPIEDVEKFKTQGANILIATPGRLEDMFRRKADGLDLATAVKSLDVLVLDEADRLLDMG
FEASLNTILGYLPKQRRTGLFSATQTQELEKLVRAGLRNPVRITVKEKGVAASSMQKTPA
RLSNYYAICRAEEKFNTLVAFLRQHKHEKQLVFFSTCACVEYFGKALEGLIKNVSIHCIH
GKMKHKRNKIFADFRALKSGILVCTDVMARGIDIPEVNWVLQYDPPSSASSFVHRCGRTA
RIGNQGNALVFLLPMEESYVNFLSINQKCPLQTYPPVKDVVDVLPKLKAMALGDRAMFEK
GMKAFVSCVQAYAKHECSLIFRIKDLDFAALARGFALLRLPKMPELRGKTFPDFKQEAID
TDTIRFKDKNREKLRQKRLAELKEKETPLKRNFIKNKAWSKQKNKKDKKKKKAAKRKLDE
ESDVDEEDLNELLNDTRLLKKLKKGKISEEDFDKHLSSAGSSRPKRAEANSSDGDGE
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacattaccgatggaaaatgggagcgtttgcccgtgaaattacatgacagtata
ttacagacacttagggagctgaaatttgcatatatgactcctgttcagtttgcctgcatc
cctctttttatgagtaataaagatgtggctgctgaagccgtgactggcagcgggaaaacc
ttggcatttgtgattcctgcgttagaaattctcctaaagcgagaagagaagttaaaaaag
atgcaggtgggtgcattgatcataacacccacccgagagctggcactgcagatcagcgag
gtgatgggacgatttctgcaggggtttcctcagtttagacagattcttttgattggtgga
agcaaccctattgaggatgtagagaagtttaagactcagggagccaatatcctaattgcg
acccctgggcgattggaggacatgttcaggaggaaggccgatgggcttgatttggccacg
gctgtgaagtctctggatgttcttgtcctggatgaggcagacagattactggacatgggc
tttgaagccagtttaaacactattctggggtatttacccaagcagcggcgcacggggctt
ttctctgccacacagacacaagagctggagaagttggtgagggctggtctgcgcaaccct
gtgcgaatcacagtgaaggagaaaggtgtggcggcctcaagcatgcagaaaacaccagcc
agactcagcaattattacgcaatatgtcgagcagaggagaagttcaacactttagtggca
tttctcaggcagcacaaacatgagaagcagcttgtgttcttcagcacctgtgcctgtgtg
gagtacttcggtaaagccctggaaggcttgatcaagaatgtcagcatccactgcatccac
gggaagatgaagcataaacgaaacaagatctttgcagatttccgggcgctgaagagtggg
attctcgtgtgcacagacgtcatggccagaggcatcgacatcccagaagtgaactgggtg
cttcagtacgacccaccaagcagtgcaagttcctttgtgcatcggtgtggacgaactgca
cgaatcggaaaccagggcaacgcactcgtctttcttctgccaatggaagagtcgtatgta
aatttcttgtccattaatcaaaagtgtcctcttcagacgtatcctccagtgaaagacgtg
gttgatgttctgcctaaactgaaggcgatggctttaggtgacagagccatgtttgagaag
ggcatgaaagcctttgtgtcgtgtgtgcaggcgtacgccaaacacgagtgtagtctgata
tttcgcattaaagacctggattttgctgctctggcccgtggctttgctctcctccgtttg
cctaaaatgcctgaactgagaggaaagaccttcccggacttcaaacaagaggccattgac
acagacaccatccgctttaaagataaaaacagggaaaaactgagacaaaaaaggctggcg
gagctgaaagaaaaagagacgccgttaaagaggaacttcatcaagaacaaagcctggtcg
aagcagaagaacaagaaggataaaaagaaaaagaaggctgccaaaagaaaactggatgag
gagtcagatgttgacgaagaagacttaaacgagcttttaaatgacacgcgtctgctgaag
aaactcaagaaaggaaagatcagtgaagaggactttgacaagcacttgagttcagcgggc
agctcacgtcccaaacgagcagaggcgaacagttctgatggagacggagaatga
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integrated database retrieval system
