Sinocyclocheilus grahami (golden-line barbel): 107602466
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Entry
107602466 CDS
T04918
Symbol
prdm16
Name
(RefSeq) PR domain zinc finger protein 16 isoform X1
KO
K22410
[histone H3]-lysine9 N-methyltransferase [EC:
2.1.1.367
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh00310
Lysine degradation
sgh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
107602466 (prdm16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgh03000
]
107602466 (prdm16)
03036 Chromosome and associated proteins [BR:
sgh03036
]
107602466 (prdm16)
Enzymes [BR:
sgh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.367 [histone H3]-lysine9 N-methyltransferase
107602466 (prdm16)
Transcription factors [BR:
sgh03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
107602466 (prdm16)
Chromosome and associated proteins [BR:
sgh03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
107602466 (prdm16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
PRDM2_PR
zf-C2H2_jaz
zf-C2H2_11
zf-C2H2_6
SET
zf-met
zf-H2C2_5
Zap1_zf1
zf-BED
zf-C2H2_8
Motif
Other DBs
NCBI-GeneID:
107602466
NCBI-ProteinID:
XP_016150458
LinkDB
All DBs
Position
Unknown
AA seq
1305 aa
AA seq
DB search
MRSKARARKLAKNESEAVDSMYDTEPNLVTGESAEEETEDSIMSPIAVGPSSPQPCNEDF
TPKEGSPYEVPVYIPDDIPIPADLELRESSVPGAGLGIWAKVKICMGERFGPYNGLQSAM
VKETTYGWEQMLNDHETSSQDSCIKKEMDNMGNVKLCLDGALEASGSWLKYVRTAPSHEE
HNLAICHISEDQIYYKATRDIEIGEELLVYMKDGVFPEGSMAPNLEDEQMYRCEHCDELF
TSKLELRRHQKYSCSCSNSMFDSLSEDFKQEHEDSDEPVHECKDCEKIFPSEYSLGQHMI
VHTDEREYKCELCPKAFNWKSNLIRHQMSHDSGKRFECENCDKVFTDPSNLQRHIRSQHI
GARAHTCPECGKTFATSSGLKQHKHIHSSVKPFIFMCVLPGEVCHKSYTQFSNLCRHKRM
HADCRTQIKCKDCGQMFSTTSSLNKHRRFCEGKNHYNPGGIFTTGIPMTSSPILGKSKSH
HGMNHSGLGFGDYFPSRLHHAGLPFSPAPHAFPALSHGFPGIFPPSLYPRPPLLPPSPLL
KSPISNSQDGKLPPLDAPTLSAVASMNNSNGNVGSGLSSQSEDNRESKLDLLFHDNKNKV
KMNDMSDGSDLEDVNTSSGTDLDTTTGTVSGSDLESEAESEREKSRRKPVQESKQDEVSS
SLVSVSSSGNLPCERPFLSSHHSFFPPPEEQALPPSGATTDSIKAIASIAEKYFGSGLMG
LQEKKMGSLNYHSMFPFQFLPNFPHSLYPFTDRALNPGMFFKPEPKCPREHIQKIPTATG
VDSPFDLTTKPKEVKPLPPPPSKPALPSNTPLAPGEEQPLDLSIGSRSRANQNGGTHDQR
KNHVYGAKCKAAKDEHLALTQSQNLHQPQMPQPQASLPQPPPPQQQPSLHYAKPSPFFMD
PIYSRVEKRKLIDPVGALKEKYLRPAPLLFHPQVSAMENMTEKLESFRSLKLDAPNSLQH
SSHHLFNFRSPPPSLSDAILRKGKERYTCRYCGKIFPRSANLTRHLRTHTGEQPYRCKYC
DRSFSISSNLQRHVRNIHNKEKPFKCHLCNRCFGQQTNLDRHLKKHEHENIPVSQQSGIL
SNLGTNISSPNSESDNHALLDEKEDSYFSEIRNFISNSELNQACSSSEKRPEQTEDDQPQ
SHTHATSKLAEEDEEMEGDDEDEEGSLTEKSQDETASPVTMVQGTYDEDEEPTPLPMSYE
HTRRCIEEDAGLLDLEPLPGFPKGLEFHKAGEEPYDIKDIFSTSVESEALKETLFRQAKT
QAYAMMLSLSENTNLHSSSQNSLDAWLNIGGGPSETSSFHPLNNI
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atgagatccaaggcgagggcgagaaaactggccaaaaatgaaagtgaggcagtagacagc
atgtacgacacagagcccaatctcgtgactggcgagagcgcagaagaggagacagaagac
agcatcatgtcccccattgcggtggggccctcgtcccctcagccctgcaatgaggacttc
actcctaaagagggctcaccctatgaggtgcccgtctacattcccgatgatattcccatc
cctgccgacctggagctccgtgagtcgtccgttccaggggctggcctaggaatctgggcc
aaagtcaaaatttgcatgggcgaacgcttcggaccgtacaacgggctgcagagcgccatg
gtgaaagagaccacttatggatgggagcaaatgctgaatgatcatgaaacgtcgtctcaa
gacagctgtattaaaaaggaaatggacaacatgggtaatgtgaagttgtgtctggatggg
gctctggaggccagcgggagctggctcaaatatgtgcgcactgccccgtcccatgaagag
cacaacctggccatatgccacatcagcgaagaccagatctattataaagctactagagat
attgaaataggggaggagttactggtttacatgaaggacggagttttccccgagggctca
atggcaccgaacctggaagatgagcagatgtaccgctgtgaacactgtgatgagctcttc
acatcaaagctggagttacggcggcatcagaaatactcctgcagttgcagcaactcgatg
tttgactcactaagcgaagatttcaaacaggagcacgaagacagcgatgagccagtgcac
gagtgcaaagactgtgaaaagatcttccctagcgagtacagtctcgggcagcacatgatc
gtacacacagatgagagagagtataagtgtgaactgtgccccaaagctttcaactggaaa
tccaacctcattcgccatcagatgtcacatgacagtggcaagcgctttgagtgtgaaaac
tgtgataaggtgttcacagaccccagcaacctccagcgccacatccgctctcagcacatc
ggtgcccgagcccacacctgccctgagtgtggcaagacctttgccacctcctcgggcctc
aagcagcacaagcacatacacagcagtgtcaagcctttcatcttcatgtgtgttctccca
ggtgaggtgtgtcacaaatcgtatacccagttctctaacctgtgtcgtcacaaacggatg
catgcagactgccgcacccagatcaagtgtaaagactgtgggcaaatgttcagcactacc
tcctccctcaacaagcatcggcgcttttgcgagggcaaaaaccattataatcccggaggc
atattcacaacgggcataccaatgacatccagtcccattttaggcaagtccaagtctcat
catggcatgaaccatagtggacttggcttcggtgattacttcccatccaggctgcatcat
gcaggtttgcccttttccccagcaccccatgcattcccagccctttcccatggcttccca
gggattttccccccatcactatatcctagaccgccattgttacctcctagtccactgctc
aagagcccaattagtaacagtcaagatgggaagctgcctcctcttgatgctcccactctt
tctgcggtcgcatccatgaacaacagcaatggcaatgtagggagcggtctcagcagccag
tcagaggacaatcgagagtccaaactggacttgttgttccacgacaacaagaataaagtg
aagatgaatgacatgtctgatggtagtgacttggaagatgtgaacacatctagcggcaca
gatctagacaccaccactggcacagtgtctggctcagatctagaaagtgaagcagagagt
gaacgggagaagagcaggaggaaaccagtgcaggagagcaagcaggatgaagtgagcagc
agtttagtatctgtctccagttcagggaacctcccttgcgagcgtcctttcctctcctcc
caccattcctttttcccaccgccagaagagcaagcacttccaccctccggggccaccact
gactccattaaagccattgcctccattgcagaaaagtattttggctcaggcttaatgggc
ttgcaggagaagaagatgggctccttaaactaccattccatgttccctttccagtttctg
cccaacttcccacattccttgtacccattcacagacagagcactcaatcctggcatgttc
ttcaaacctgagcctaaatgccctcgtgagcacatacagaaaatacctacagccactggt
gtggattcaccctttgacctaaccaccaaacccaaggaggtcaaacctcttcctccaccc
cccagcaagccagccttgccatccaatacccccttggcccctggtgaggaacaacctctg
gacctcagcataggcagtcgaagccgagccaaccagaacggtggcacacacgatcagcgc
aagaatcacgtctatggcgcaaaatgcaaagcagctaaagatgaacacctagcactaact
cagtcccagaacttgcaccagccccagatgcctcagccgcaagcatcccttccacagcca
cctcctccccagcagcagccgtcgctccactatgccaagccctcgccattcttcatggac
cccatctacagcagggtggagaagaggaagctaatagacccagtaggagctctaaaggag
aagtacttgaggccggcaccactacttttccatcctcaggtgtctgcgatggaaaacatg
actgagaagttggaaagctttagatctctgaaactggatgctcccaattccctccagcac
tcctcacaccacctttttaacttccgctccccgcctccctctctctcagatgctatctta
cgcaaaggcaaggagcgatatacctgcaggtactgtgggaaaatctttcccaggtcagct
aatcttacaaggcacttacgaacacacacaggagaacaaccctacagatgtaaatactgt
gaccgttcattcagcatctcctccaacctccagcgacatgttcgtaacattcataacaag
gaaaagccgttcaagtgccacctttgcaatcgctgcttcggtcaacagaccaatctggac
cgccacttaaagaaacatgaacatgagaatattccagtgagtcagcagtctgggatcctc
tcaaatttaggaacaaatatttcctcaccgaactctgagtctgacaatcatgcacttttg
gatgagaaggaggactcgtatttctcagagattaggaacttcatctccaatagtgagctg
aaccaggcctgtagctcctcggagaaaaggccagagcagacggaggacgatcagcctcag
agtcacactcatgccacctcaaaactggcggaggaagatgaggagatggagggagatgat
gaagatgaggaaggctcgttgacagaaaagtcacaggacgagacggcctctcccgtcact
atggtgcagggcacttatgacgaggacgaggagcccacccctctccctatgtcttacgaa
cacacgcgcaggtgcattgaggaggatgcaggcctgttagatctggaacctctgcctggt
ttccccaaaggcctggagttccataaggctggcgaggagccctatgacattaaagacatt
tttagcacctcggtagagtcggaggcgctgaaagaaacacttttcaggcaggctaaaaca
caggcttatgcaatgatgctctctctgtctgagaacaccaatctgcattcatcctcccag
aactccttggatgcctggctcaacataggaggagggccgtcggagacgagctcctttcac
cccctcaacaacatctga
DBGET
integrated database retrieval system
