Sinocyclocheilus grahami (golden-line barbel): 107602808
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Entry
107602808 CDS
T04918
Name
(RefSeq) polypyrimidine tract-binding protein 1-like isoform X1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgh03019
]
107602808
03041 Spliceosome [BR:
sgh03041
]
107602808
Messenger RNA biogenesis [BR:
sgh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
107602808
Spliceosome [BR:
sgh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107602808
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
107602808
NCBI-ProteinID:
XP_016150881
UniProt:
A0A672RL83
LinkDB
All DBs
Position
Unknown
AA seq
565 aa
AA seq
DB search
MDGRLETELYPMGSSYAELDVVHDIAVGTKRGSDELFSCVSSGPYIMSSAANGNDSKKFK
GDIRSPAVPSRVIHVRKLPNDINEAEVISLGLPFGKVTNLLMLKGKNQAFLEMNTEEVAQ
TMVTYYSSVTPVIRNHPIFMQYSNHKELKTDNSPNQVRAQAALQAVNAVQTGSMTLGAID
PSGMAGPSPVLRVIVENLFYPVTLDVLHQIFSKFGTVLKVITFTKNNQFQALLQFADGLT
AQHAKLALDGQNIYNGCCTLRISFSKLTSLNVKYNNDKSRDYTRPDLPTGDSQHAIEHHA
LAAAFAAPGIISATPYPGAHAFPPAFAIQQAAGFAIPGVPGALASLAIPGTAAAAAAASR
LGFPSFPGTHCVMLVSNLNPERVTPHCLFILFGVYGDVLRVKIMFNKKENALIQMCDGTQ
AQLAMSHLNGQKLYGRPLRITLSKHTTVQMPREGHEDQGLTKDYSSSPLHRFKKPGSKNY
SNIFPPSSTLHLSNIPPAVVEDDLKLLFASNGALVKNFKFFQKDRKMALIQMGSVDEAIE
SLIQFHNHDLGENHHLRVSFSKSII
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggacggccgcctagagactgaattgtatcctatgggatcaagttacgcagaattagac
gttgttcatgatattgcagttggtacaaagagaggatctgacgagctgttctcctgtgtt
tccagcgggccttatatcatgagctcagcagccaacggcaacgacagcaagaagttcaaa
ggcgacatcagaagtcctgccgtcccgtccagagttatacatgtccgcaagctgcccaat
gacatcaacgaagcggaggtcatctccctcggccttccctttggcaaagttaccaacctg
ctcatgctgaagggaaagaaccaggctttcttggaaatgaatactgaagaagtagcccag
acgatggttacttactactcctccgtaacgcccgtcatcagaaatcatcccatcttcatg
cagtactcaaaccacaaagagctgaaaacagacaactcaccaaaccaagtgagggcacag
gcagcactgcaggcggtgaatgctgtccagactggtagcatgactctaggtgccattgac
ccgtccggtatggctggccccagccctgtcctaagggtcatcgttgaaaacctcttttac
cctgtgaccctagatgtcctgcaccagatcttctccaagtttggcacagtgctgaaagtg
atcactttcacaaaaaacaaccagtttcaagctctcctccagtttgctgatggcctgacg
gcacaacatgccaagctggctttagatggacagaacatctacaatggctgctgtaccttg
cgcatcagcttttccaaacttaccagcttaaatgtcaaatacaataacgacaagagccgt
gactatactcgcccggacctgcccactggggacagtcaacacgctattgaacatcatgct
ttggctgctgcttttgctgctcctgggatcatctcagctacgccatatccaggagcgcac
gccttccctccagcttttgctatccagcaggctgcagggtttgcaatacctggggttccc
ggagccctcgcctcactggccattcccgggacagcagcggccgctgcggctgcaagcaga
ctgggcttcccctccttccctggcacccactgcgtcatgctggtcagcaacctgaaccct
gagagagttacgccccactgcctctttattctcttcggtgtatatggggatgtattgaga
gtgaaaatcatgttcaacaagaaggagaacgctctcatacaaatgtgtgatgggacacag
gctcagctggcaatgagtcatctaaacgggcagaagttatacggcaggcccctgcgcatc
acgctgtccaaacacacgactgtccagatgccacgggagggacatgaggaccagggtctc
accaaagactacagcagctctcctctccatcgcttcaagaagccaggctccaaaaactac
tccaacatctttcctccctcatctaccctgcacctgtctaacatcccacccgcggttgtc
gaagatgacctcaagctgctctttgctagcaatggtgctctggtcaagaacttcaagttc
tttcagaaggatcgcaagatggctctgattcagatgggttcggtggatgaagcgatcgag
tcccttatccagttccacaaccatgatctcggagaaaaccaccatcttagggtttccttc
tccaagtccatcatttga
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