Sinocyclocheilus grahami (golden-line barbel): 107603025
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Entry
107603025 CDS
T04918
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2B-like isoform X1
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04020
Calcium signaling pathway
sgh04080
Neuroactive ligand-receptor interaction
sgh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
107603025
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
107603025
04082 Neuroactive ligand signaling
107603025
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sgh04040
]
107603025
Ion channels [BR:
sgh04040
]
Ligand-gated channels
Glutamate (ionotropic)
107603025
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
107603025
NCBI-ProteinID:
XP_016151179
LinkDB
All DBs
Position
Unknown
AA seq
1611 aa
AA seq
DB search
MSRNWLQGVVFGDDTDQEAIAQILDFISAQTHIPILGIRGGSSMIMAAKDDHSMFFQFGP
SIEQQASVMLNIMEEYDWYIFSIVTTYYPGYQDFVNRIRSTVENSFVGWELEEVLLLDMS
VDDGDSKIQNQMKKLQSPVILLYCTKEEAMTIFEVAHSVGLTGYGYTWIVPSLVTGDADN
VPSVFPTGLISVSYDEWDYGLEARVRDAVAIIAMATSTMMLDRGPHTLLKSGCHGTPDKK
GSKSGNPNEVLRYLMNVTFEGRNLSFSEDGFQMHPKLVIILLNKERQYERVGKWENGSLT
MKYHVWPRFEIYSDAEEREDDHLSIVTLEEAPFVIVEDVDPLSGTCMRNTVPCRKQLKLL
NQTRDSGIYIKRCCKGFCIDILKKIAKSVKFTYDLYLVTNGKHGKKINGTWNGMVGEVVL
KNAHMAVGSLTINEERSEVIDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMF
VMLLIVSAVAVFIFEYFSPVGYNRCLADGREPGGPSFTIGKAIWLLWGLVFNNSVPVQNP
KGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEYVDQVTGLSDKKFQHPNDFSPPFRF
GTVPNGSTERNIRNNYKEMHSYMTSFHQKNVNEALHSLKSGKLDAFIYDAAVLNYMAGRD
EGCKLVTIGSGYIFATTGYGIAIQKDSGWKRAVDLAILQLFGDGEMEEFEALWLTGICHN
EKNEVMSSQLDVDNMAGVFYMLGAAMALSLITFIAEHLFYWQLRFCFMGVCSGKPGFTFS
ISRGIYSCIHGVQIEENKSALNSPSATMNMSMNNTHSNILRLLRTAKNMTSVPGVNGSPR
SALDYSHRESAVYDISEHRRSLVGHTDCKPPPYLPEDNMFSDYVSEVERTFGNLHLKDSN
LYQDHYLHHHGGTGSELALGMSGPLPNRPHSLGSASSLEGGYDCDSLGGGVAPIFTTQPR
QSLTHRNSEKFDLIAGHPTQSSFKSGLPDLYGKFSFKGGASSSGFIAGHDRYCGGGGVGS
GGDDGNIRSDVSDISTHTVTYGNLEGHGKRRKQYRDSLKKRPASAKSRREQDEIELGFRR
RPHHTIHHHHHHHHSATQAHRSATPPVERKSQRGGNCTSYLFRDKENLRDFYVDQFRTKE
EASPWEHLDLSDAPGMGGGVGLGGGSCSGVVSSGGAGGACTSLVPMEDFLKGKSKKTECK
GGMGGGSPGQQGHACWEKGIGGVGGLAGGDWECRNCHSGGVGSGGSKPVCMHGGGGVGGV
GGTSGGSGQISSRPSSATCKRCDSCKKPGNLYDISEDNHLLLLDQTGGKHPLESGKGGGG
GGTGAQTQVQRRKFGPGGKVLRRQHSYDTFVELQKEGAGRMGGFGGSGGASMLPPPRSVS
LKDRDRYMDGASPYAQMFEQYAGGERETSYFGDRGKGGGSSFSLFHGGEGGLHRRSVGER
DTRDRDRGMMGGGVGGTRGVGTYSLSKSLYPDKVNQNPFIPTFGDDQCLLHGAKSYYIKK
QQAQPQQQQMPQQQQQQQLLNNSRADFRGSMGVTSYLPASATSGVLSNVAPRFPKELCLG
GPLGNHHGGGPSNNKLLSARDGLGMGQGQRPFNGSSNGHVYEKLSSIESDV
NT seq
4836 nt
NT seq
+upstream
nt +downstream
nt
atgtcacggaactggctccagggtgtggtgtttggggacgataccgatcaggaggccatc
gcccagatattggacttcatctcggctcagacgcacatccccatcctgggcatccgtgga
ggctcttccatgatcatggcagccaaggatgaccattccatgttcttccagtttggtccc
tctatagagcagcaagcctctgtcatgcttaacataatggaggaatatgactggtacata
ttctccatcgtcaccacctactaccctggataccaggactttgtcaatcggatccggagt
accgtcgagaacagttttgttggctgggagctggaagaggtgctgctgttggacatgtca
gtagacgatggtgactcaaagatccagaaccagatgaagaagctccaaagtcctgttata
ctactgtactgcacaaaagaagaagccatgaccattttcgaggtggcccattctgtcggc
ctcactggttatggttacacctggatcgtaccatctctggtgacaggggatgcagataat
gtacccagcgtctttccaacaggtttgatctctgtttcctacgatgagtgggactacggg
ctggaggctcgagtgcgtgatgctgtagccataatcgccatggcaacctccacaatgatg
ctggatcggggtcctcacacgctgcttaagtctggatgccacggcacacctgacaagaaa
ggcagcaagtcaggaaaccccaacgaggtgctgaggtatctcatgaatgtgacatttgaa
gggcgcaacctctccttcagtgaggatggttttcagatgcacccaaagttggttattata
ctgttaaataaggagaggcagtatgaaagggtcggtaaatgggagaatgggtctctgaca
atgaagtaccacgtgtggccacggtttgagatctactcagatgctgaggagcgggaggac
gaccacctgtccattgttacgctggaggaggctccatttgttattgtggaggatgttgac
cccctcagtggcacctgtatgagaaatacagtgccgtgcagaaaacagctcaaactccta
aatcagacaagagattcagggatctacattaaacgctgttgcaagggcttctgtatagac
atcctcaaaaagattgccaagtctgtaaaattcacctacgatctctacctggtgaccaat
gggaagcacggcaaaaagatcaacggcacatggaatggcatggttggagaggtggtgttg
aagaatgcccacatggcagtggggtccctgaccattaatgaagagaggtcagaggtcatt
gacttctctgtgccctttatagagactggaattagtgtcatggtctctcgtagcaatggc
acagtgtcaccttctgcctttttagagcccttcagcgctgatgtctgggtaatgatgttc
gttatgctgttgatagtttcagctgtggctgtcttcatttttgagtacttcagtcctgtt
ggatataatcgctgcttggcagatggacgagagcctggcggtccttccttcaccattgga
aaagctatttggctactttggggtttggtcttcaataactctgtgcccgtgcagaacccc
aaaggcactactagcaagattatggtctcggtctgggccttcttcgctgtgattttcctg
gccagctacactgccaacctggccgcatttatgattcaagaggaatatgtggaccaggtg
actggcctgagtgataaaaagtttcaacatccaaatgacttctcccctccattccgcttt
ggtactgtgcccaatggcagcacagagagaaacataaggaacaactacaaagagatgcac
tcctatatgaccagcttccaccagaagaacgtaaacgaggccctccacagcctgaagtcg
ggtaaattggatgcattcatctacgatgcagcggtcttgaactacatggccggacgtgat
gaaggctgtaaactggtgaccatcggcagtggttatatctttgctactacagggtatggc
attgccattcagaaagactcaggctggaagagggcagtggacctcgccattctgcagctc
tttggagatggtgagatggaggaattcgaggccctgtggctgactggcatctgccacaat
gagaaaaatgaggtgatgagcagtcagctggatgtagacaacatggcaggtgtgttctac
atgctgggagctgcaatggccctgtccctaatcacattcatcgcagagcacctcttctac
tggcaactgcgattctgcttcatgggtgtgtgctcaggcaagcccggcttcaccttctcc
atcagcaggggcatctacagttgcatccatggtgttcagattgaagagaacaaatcagcc
cttaactcaccatcggccactatgaacatgagcatgaacaacacccactccaacattctc
cgtttgttgcgtactgccaaaaacatgacctctgtgcctggggtcaatggttcacctcgc
agtgcattggactacagccatcgtgagtcagccgtttatgacatcagtgaacaccggcgc
agcctagtaggccacacagactgcaagcctccaccgtacctgccagaggataacatgttc
agcgactatgtaagcgaagtggagaggacttttgggaatttgcacctgaaggacagcaac
ctgtaccaggatcattacctacaccaccatgggggcacgggatccgaactggctctcggt
atgtcgggtcccctgcctaaccgacctcatagcttagggagtgccagttcattggagggt
gggtatgattgtgacagcttagggggaggggtagcgcccatcttcaccacccagccacgg
cagtcgctgacacatcggaacagtgaaaagtttgacctgatcgcgggtcacccaacccag
tcaagcttcaagtctggcctgcctgatctatatggaaagttctccttcaagggtggggca
tccagttcagggtttattgcaggacatgacaggtactgcgggggaggtggggtgggatca
ggaggggatgatggaaacattcgatccgacgtgtccgatatttccactcacaccgtgacc
tatgggaacctcgaaggacatggcaaacggcgcaaacagtacagggacagcttaaaaaag
agacccgcttctgccaagtctcgccgtgagcaggatgagattgagcttggcttcaggaga
cgaccccaccatacaatccatcatcatcatcaccaccatcattcagcaacacaagcccac
cgctcagccaccccacccgtggagcgcaagagccagagaggtggtaactgcacctcttat
ctattcagagacaaagagaatttgagggacttctatgtggaccagtttcgaaccaaggaa
gaggcatccccatgggagcatttggatttaagtgatgctccaggaatgggtggaggagtg
ggactgggcggaggcagttgcagtggagtagttagtagcggtggtgctgggggagcgtgc
actagtttggttcccatggaagatttcctgaaaggtaaatccaagaagacagaatgtaag
ggtggaatgggaggaggatcacctgggcaacagggccatgcatgctgggaaaagggcatc
ggaggggtgggagggttggccggaggggattgggaatgtcgcaattgccacagtggaggg
gttggaagtggaggaagcaagccagtttgcatgcatgggggaggcggggttgggggagta
gggggaaccagtggagggagtggacaaatctcaagccgccctagttcagccacctgcaag
cggtgtgattcgtgcaagaaaccgggcaacttgtatgacatcagtgaggacaaccacctc
cttctcttggatcaaactgggggcaagcaccctctggagagtggaaagggagggggaggg
ggaggcacaggggcccaaacccaggtacagaggcggaaatttggcccaggtggtaaggtt
ttgcgcaggcagcattcttatgacacatttgtagagctgcagaaggaaggggcgggcagg
atgggtgggtttggaggcagtggcggagcatcaatgcttcctccaccccgaagtgtgagc
ctaaaagacagagaccgctacatggatggcgcgagcccctacgcacagatgtttgagcag
tatgcaggaggggagcgggaaacatcatattttggggacagagggaagggtgggggttca
tcatttagcttattccatgggggtgaaggtgggttgcaccgtcgctccgtgggtgagaga
gacacgagggacagggatagaggcatgatgggaggaggtgtgggcggtacccgaggggtc
gggacttactccttgtctaaatctctctacccagataaggtgaaccagaacccattcatc
ccaaccttcggcgacgaccagtgtctattacatggcgccaaatcatactacatcaaaaag
cagcaggcacagccgcagcagcaacagatgccacaacagcagcagcagcaacagctcctc
aacaacagtcgggctgacttccggggctccatgggggtgacttcctatttgcctgcctcc
gcaacttctggggtattgtccaatgtggcccctcggttccccaaggagctatgtctgggc
gggcctcttggcaaccaccacggtggaggacctagcaacaacaagctgctgtcagcaagg
gatgggttaggaatgggtcaaggacagagaccgtttaatggctcgagcaacggacatgtt
tacgagaagctttccagtatagagtctgatgtctga
DBGET
integrated database retrieval system
