Sinocyclocheilus grahami (golden-line barbel): 107603172
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Entry
107603172 CDS
T04918
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4-like
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107603172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sgh03041
]
107603172
Spliceosome [BR:
sgh03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
107603172
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Gbeta
Beta-prop_WDR3_2nd
WDR55
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_EML
WD40_MABP1-WDR62_1st
NBCH_WD40
PRP4
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_WDR41
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
WD_LRWD1
Beta-prop_Vps41
WD40_like
Ge1_WD40
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_WDR11_1st
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
107603172
NCBI-ProteinID:
XP_016151372
LinkDB
All DBs
Position
Unknown
AA seq
352 aa
AA seq
DB search
MKESLLFSSVISFFFLSSGESMEMEERVSERQAEVLAEFERRKRARQITVSTDDVEVKAC
LRALGEPITLFGEGPAERRERSGLCKLWKVPDCTLVRTLRGHNTNVGAISFHPQATLTLE
ESDVNMASCAVDGSVKLWSLDSDEPVADIEGHSMRVARVAWHPSGRFLGTTCYDNSWRLW
DLEVQEEILHQEGHSKGVHDLHFHPDGSLAGTGGLDAFARVWDLRTGRCIMFLEGHHKEI
YSINFSPNGFHLATGSGDNTCKVWDLRQRRCMYTIPAHENLVSSVKFQPNDGHFLLTGAY
DNIAKVWTHPGWSPLKTLAGHEGKVMGLDLSPDGQLIATCSYDRTFKLWMAE
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaagtttgctctttagtagtgtaattagtttcttctttctctcctcaggcgag
tctatggagatggaggagcgtgtgagtgagcgacaggctgaagtgctagcagagtttgag
cgcagaaagagagcgagacaaatcaccgtctctactgatgatgtagaggtcaaggcctgc
ctccgagctcttggcgagccaatcacgctgtttggggaggggcctgcagagagacgagag
aggagtggcttgtgtaaattgtggaaagtcccagattgtacacttgtacgcacattaaga
ggtcacaataccaacgtgggagcgattagctttcaccctcaagccacactcacactcgag
gagtcggatgtcaatatggcctcctgtgctgtggatggatctgttaagctgtggagttta
gacagtgatgagcctgtagcagacattgaggggcactctatgagggtggctcgggtggcc
tggcatccctctgggcggtttctgggcacaacttgctatgataactcatggcgactttgg
gatcttgaagttcaagaagaaattctgcatcaggagggtcatagtaaaggtgtccatgac
ctgcacttccacccggatggctctctggcaggaactggtggtttggatgcatttgctcgt
gtctgggacctgcggactggtcgttgtatcatgttcctggagggccaccacaaagagatt
tacagcatcaatttctcaccaaacggctttcacttggcaaccggaagtggagataacacc
tgtaaagtgtgggaccttcgtcagagaaggtgcatgtacacaattcctgcccatgaaaac
cttgtgtcttcagtcaagttccaacctaacgatgggcattttttgctgactggtgcgtat
gacaacatagccaaagtgtggacacatcccggctggtcacctctgaagactctggcgggg
catgaaggaaaggtcatggggcttgacctttcacctgacggacagctcattgcaacctgc
tcttatgaccgaaccttcaaactctggatggcagaatga
DBGET
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